; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg17655 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17655
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNADH-ubiquinone oxidoreductase chain 5
Genome locationCarg_Chr12:4378419..4380556
RNA-Seq ExpressionCarg17655
SyntenyCarg17655
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585775.1 hypothetical protein SDJN03_18508, partial [Cucurbita argyrosperma subsp. sororia]7.8e-8099.41Show/hide
Query:  MEMEIRGRTTNKRRTEFNAPALSLSLNSISQFLLHIVSHCFKSSDLHRRPTSPEAKETRSRGAAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITS
        MEMEIRGRTTNKRRTEFNAPALSLSLNSISQFLLHIVSHCFKSSDLHRRPTSPEAKETRS+GAAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITS
Subjt:  MEMEIRGRTTNKRRTEFNAPALSLSLNSISQFLLHIVSHCFKSSDLHRRPTSPEAKETRSRGAAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITS

Query:  SRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRMLLPLSM
        SRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRMLLPLSM
Subjt:  SRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRMLLPLSM

KAG7020712.1 hypothetical protein SDJN02_17399 [Cucurbita argyrosperma subsp. argyrosperma]2.7e-80100Show/hide
Query:  MEMEIRGRTTNKRRTEFNAPALSLSLNSISQFLLHIVSHCFKSSDLHRRPTSPEAKETRSRGAAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITS
        MEMEIRGRTTNKRRTEFNAPALSLSLNSISQFLLHIVSHCFKSSDLHRRPTSPEAKETRSRGAAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITS
Subjt:  MEMEIRGRTTNKRRTEFNAPALSLSLNSISQFLLHIVSHCFKSSDLHRRPTSPEAKETRSRGAAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITS

Query:  SRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRMLLPLSM
        SRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRMLLPLSM
Subjt:  SRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRMLLPLSM

XP_008464874.1 PREDICTED: uncharacterized protein LOC103502637 isoform X1 [Cucumis melo]1.1e-5284.56Show/hide
Query:  LSLNSISQFLLHIVSHCFKSSDLHRRPTSPEAKETRSRG--AAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVF
        LSLNSISQFL+  +  CF+SS LH   +S EAK+ RSRG  +AMITRSNLVEQLREYQIRSKHEWASVS FSS SNITSSRVDVVIFVIWELIIL+FLVF
Subjt:  LSLNSISQFLLHIVSHCFKSSDLHRRPTSPEAKETRSRG--AAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVF

Query:  SAVSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRMLLPLSM
        SAVSLYFRHMQLA ILVCITMLLL+CMKVTKQVRLARKKKRRMLLPLSM
Subjt:  SAVSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRMLLPLSM

XP_022951473.1 uncharacterized protein LOC111454282 [Cucurbita moschata]3.6e-7798.8Show/hide
Query:  IRGRTTNKRRTEFNAPALSLSLNSISQFLLHIVSHCFKSSDLHRRPTSPEAKETRSRGAAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVD
        +RGRTTNKRRTEFNAPALSLSLNSISQFLLH VSHCFKSSDLHRRPTSPEAKETRSRGAAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVD
Subjt:  IRGRTTNKRRTEFNAPALSLSLNSISQFLLHIVSHCFKSSDLHRRPTSPEAKETRSRGAAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVD

Query:  VVIFVIWELIILAFLVFSAVSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRMLLPLSM
        VVIFVIWELIILAFLVFSAVSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRMLLPLSM
Subjt:  VVIFVIWELIILAFLVFSAVSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRMLLPLSM

XP_038884232.1 uncharacterized protein LOC120075129 [Benincasa hispida]1.8e-5587.07Show/hide
Query:  LSLNSISQFLLHIVSHCFKSSDLHRRPTSPEAKETRSRGAAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVFSA
        LSLNSISQFL+  V  C KSS LH RP+S EAK+ +SRG+AMITRSNLVEQLREYQIRSKHEWASVS FSS SNITSSRVDVVIFVIWELIIL+FLVFSA
Subjt:  LSLNSISQFLLHIVSHCFKSSDLHRRPTSPEAKETRSRGAAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVFSA

Query:  VSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRMLLPLSM
        VSLYFRHMQLA ILVCITMLLL+CMKVTKQVRLARKKKRRMLLPLSM
Subjt:  VSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRMLLPLSM

TrEMBL top hitse value%identityAlignment
A0A0A0KIH9 Uncharacterized protein1.5e-5284.56Show/hide
Query:  LSLNSISQFLLHIVSHCFKSSDLHRRPTSPEAKETRSRG--AAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVF
        LSLNSISQFL+  +  CF SS LH   +S EAK+ RSRG  +AMITRSNLVEQLREYQIRSKHEWASVS FSS SNITSSRVDVVIFVIWELIIL+FLVF
Subjt:  LSLNSISQFLLHIVSHCFKSSDLHRRPTSPEAKETRSRG--AAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVF

Query:  SAVSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRMLLPLSM
        SAVSLYFRHMQLA ILVCITMLLL+CMKVTKQVRLARKKKRRMLLPLSM
Subjt:  SAVSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRMLLPLSM

A0A1S3CMK7 uncharacterized protein LOC103502637 isoform X15.1e-5384.56Show/hide
Query:  LSLNSISQFLLHIVSHCFKSSDLHRRPTSPEAKETRSRG--AAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVF
        LSLNSISQFL+  +  CF+SS LH   +S EAK+ RSRG  +AMITRSNLVEQLREYQIRSKHEWASVS FSS SNITSSRVDVVIFVIWELIIL+FLVF
Subjt:  LSLNSISQFLLHIVSHCFKSSDLHRRPTSPEAKETRSRG--AAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVF

Query:  SAVSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRMLLPLSM
        SAVSLYFRHMQLA ILVCITMLLL+CMKVTKQVRLARKKKRRMLLPLSM
Subjt:  SAVSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRMLLPLSM

A0A6J1G568 uncharacterized protein LOC1114507861.6e-4979.59Show/hide
Query:  LSLNSISQFLLHIVSHCFKSSDLHRRPTSPEAKETRSRGAAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVFSA
        LSLNSISQFL+  +  C K   LHRRP    +++  SRGAAMITRSNLVEQLREYQIRSKH+WAS S FSS SNITSSRVDVVIFVIWELIIL+FLVFSA
Subjt:  LSLNSISQFLLHIVSHCFKSSDLHRRPTSPEAKETRSRGAAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVFSA

Query:  VSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRMLLPLSM
        VSLYFRHMQL  +LVCITMLL++CMKVTKQ+RLARKKKRRMLLPLSM
Subjt:  VSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRMLLPLSM

A0A6J1GHS6 uncharacterized protein LOC1114542821.8e-7798.8Show/hide
Query:  IRGRTTNKRRTEFNAPALSLSLNSISQFLLHIVSHCFKSSDLHRRPTSPEAKETRSRGAAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVD
        +RGRTTNKRRTEFNAPALSLSLNSISQFLLH VSHCFKSSDLHRRPTSPEAKETRSRGAAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVD
Subjt:  IRGRTTNKRRTEFNAPALSLSLNSISQFLLHIVSHCFKSSDLHRRPTSPEAKETRSRGAAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVD

Query:  VVIFVIWELIILAFLVFSAVSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRMLLPLSM
        VVIFVIWELIILAFLVFSAVSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRMLLPLSM
Subjt:  VVIFVIWELIILAFLVFSAVSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRMLLPLSM

A0A6J1KBR2 uncharacterized protein LOC1114940245.9e-4978.23Show/hide
Query:  LSLNSISQFLLHIVSHCFKSSDLHRRPTSPEAKETRSRGAAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVFSA
        LSLNSISQFL+  +  C K    HRRP    +++  SRGAAMITRSNLVEQLREYQIRSKH+WAS S FSS SNITSSRVDVVIFVIWELIIL+FLVFSA
Subjt:  LSLNSISQFLLHIVSHCFKSSDLHRRPTSPEAKETRSRGAAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVFSA

Query:  VSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRMLLPLSM
        VSLYFRHMQL  +L+CITMLL++CMKVTKQ+RLARKKKRRMLLPLSM
Subjt:  VSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRMLLPLSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G20460.1 unknown protein2.0e-4185.85Show/hide
Query:  MITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRM
        MITRSNL EQLREYQIRSKH+WASVS FSS SN +SSRVDVV+FVIWEL+ILAF VFSAVSLYF+ +QLA ILVC+T+LLLICMKVTKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

AT1G76185.1 unknown protein2.5e-3981.13Show/hide
Query:  MITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRM
        MITRSNL EQLREYQIRSKH+WASVS FSS SN +SSRVDVV+FVIWEL++LA +VFSAVSLYFR +QLA IL+C+T+LLL+CMK+TKQVR ARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATGGAAATTAGGGGAAGAACAACAAATAAGAGAAGGACCGAATTCAACGCTCCTGCTCTCTCTCTTTCTCTCAATTCCATTTCTCAATTCCTCCTTCACATCGT
CTCTCACTGTTTCAAATCCTCCGATCTCCACCGTCGCCCTACCTCCCCTGAGGCGAAGGAAACAAGGTCTCGGGGCGCTGCCATGATTACTCGGTCGAATCTGGTTGAGC
AGTTGAGAGAATACCAGATTCGATCGAAGCACGAGTGGGCTTCCGTCTCCTTATTTTCATCTGCCTCCAACATTACTTCTTCCAGGGTGGATGTTGTCATTTTTGTAATA
TGGGAACTCATTATTCTAGCGTTCTTGGTCTTTTCGGCAGTGTCTTTATATTTTCGACATATGCAATTGGCTTCTATTTTAGTGTGCATTACGATGCTGTTACTTATATG
CATGAAAGTTACCAAGCAAGTGAGATTGGCTAGGAAGAAGAAAAGAAGGATGCTTCTTCCATTGTCGATGTGA
mRNA sequenceShow/hide mRNA sequence
AAGGGGAAAAATAGAGGAAATAATGGAAATGGAAATTAGGGGAAGAACAACAAATAAGAGAAGGACCGAATTCAACGCTCCTGCTCTCTCTCTTTCTCTCAATTCCATTT
CTCAATTCCTCCTTCACATCGTCTCTCACTGTTTCAAATCCTCCGATCTCCACCGTCGCCCTACCTCCCCTGAGGCGAAGGAAACAAGGTCTCGGGGCGCTGCCATGATT
ACTCGGTCGAATCTGGTTGAGCAGTTGAGAGAATACCAGATTCGATCGAAGCACGAGTGGGCTTCCGTCTCCTTATTTTCATCTGCCTCCAACATTACTTCTTCCAGGGT
GGATGTTGTCATTTTTGTAATATGGGAACTCATTATTCTAGCGTTCTTGGTCTTTTCGGCAGTGTCTTTATATTTTCGACATATGCAATTGGCTTCTATTTTAGTGTGCA
TTACGATGCTGTTACTTATATGCATGAAAGTTACCAAGCAAGTGAGATTGGCTAGGAAGAAGAAAAGAAGGATGCTTCTTCCATTGTCGATGTGAAAAGGTAACAACAGT
GCAGAGACATACTAAACTTTTATATGTTGTTTCCAAATGTCCCAAATTATGTTCACAAAAGTTAGATTTGGTCCTAAATTTGTTATATTGGGATCTGTAATGAGCAGGAA
AGCAGATTGTTTGAAAAATGGAATGAGATATGAGTGAGTTGTTTAGGAGTTTGGCTCATCTTCTTCTTCTTCTTCTTCTTCTTTCTTTCTTCAT
Protein sequenceShow/hide protein sequence
MEMEIRGRTTNKRRTEFNAPALSLSLNSISQFLLHIVSHCFKSSDLHRRPTSPEAKETRSRGAAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVI
WELIILAFLVFSAVSLYFRHMQLASILVCITMLLLICMKVTKQVRLARKKKRRMLLPLSM