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Carg17670 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17670
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr12:4275641..4276135
RNA-Seq ExpressionCarg17670
SyntenyCarg17670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048838.1 hypothetical protein E6C27_scaffold171G00510 [Cucumis melo var. makuwa]3.2e-4984.82Show/hide
Query:  GGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEGKDEAKFSIESRTMW
        G DLNPNAKEW+PI+D APEEDRCLFLTFSNG+PLTEHQIV FFTRKFGACIERVYVHY EGGK+ PLFGKVVFVASSIPAI+L GK+EAKFSI+S+TMW
Subjt:  GGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEGKDEAKFSIESRTMW

Query:  CKRYEARKARYR
        CK++EARKAR R
Subjt:  CKRYEARKARYR

KAE8650218.1 hypothetical protein Csa_011746 [Cucumis sativus]1.0e-4782.14Show/hide
Query:  GGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEGKDEAKFSIESRTMW
        G DLNPNAKEW+PI+D APEEDRCLFLTFSNG+PLTE+QIV FFTRKFGACIERVYVHY EGGK+ PLFGKVVFVASSIPAI+L GK+EAKFSI+++TMW
Subjt:  GGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEGKDEAKFSIESRTMW

Query:  CKRYEARKARYR
        CK++E+RKAR R
Subjt:  CKRYEARKARYR

XP_022924654.1 uncharacterized protein LOC111432088 [Cucurbita moschata]8.7e-71100Show/hide
Query:  MGDKEAVEEGTTNGGGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEG
        MGDKEAVEEGTTNGGGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEG
Subjt:  MGDKEAVEEGTTNGGGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEG

Query:  KDEAKFSIESRTMWCKRYEARKARYRLCRGR
        KDEAKFSIESRTMWCKRYEARKARYRLCRGR
Subjt:  KDEAKFSIESRTMWCKRYEARKARYRLCRGR

XP_022979539.1 uncharacterized protein LOC111479214 [Cucurbita maxima]9.6e-7098.47Show/hide
Query:  MGDKEAVEEGTTNGGGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEG
        MGDKEAVEEGTTNGGGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTR+FGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEG
Subjt:  MGDKEAVEEGTTNGGGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEG

Query:  KDEAKFSIESRTMWCKRYEARKARYRLCRGR
        KDEAKF IESRTMWCKRYEARKARYRLCRGR
Subjt:  KDEAKFSIESRTMWCKRYEARKARYRLCRGR

XP_023528303.1 uncharacterized protein LOC111791264 [Cucurbita pepo subsp. pepo]3.3e-7099.24Show/hide
Query:  MGDKEAVEEGTTNGGGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEG
        MGDKEAVEEGTTNGGGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEG
Subjt:  MGDKEAVEEGTTNGGGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEG

Query:  KDEAKFSIESRTMWCKRYEARKARYRLCRGR
        KDEAKF IESRTMWCKRYEARKARYRLCRGR
Subjt:  KDEAKFSIESRTMWCKRYEARKARYRLCRGR

TrEMBL top hitse value%identityAlignment
A0A0A0L3N4 Uncharacterized protein1.3e-4075Show/hide
Query:  GGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEGKDEAKFSIESRTMW
        G DLNPNAKEW+PI+D APEEDRCLFLTFSNG+PLTE+QIV FFT        RVYVHY EGGK+ PLFGKVVFVASSIPAI+L GK+EAKFSI+++TMW
Subjt:  GGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEGKDEAKFSIESRTMW

Query:  CKRYEARKARYR
        CK++E+RKAR R
Subjt:  CKRYEARKARYR

A0A5A7U0U8 Uncharacterized protein1.6e-4984.82Show/hide
Query:  GGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEGKDEAKFSIESRTMW
        G DLNPNAKEW+PI+D APEEDRCLFLTFSNG+PLTEHQIV FFTRKFGACIERVYVHY EGGK+ PLFGKVVFVASSIPAI+L GK+EAKFSI+S+TMW
Subjt:  GGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEGKDEAKFSIESRTMW

Query:  CKRYEARKARYR
        CK++EARKAR R
Subjt:  CKRYEARKARYR

A0A6J1E9T6 uncharacterized protein LOC1114320884.2e-71100Show/hide
Query:  MGDKEAVEEGTTNGGGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEG
        MGDKEAVEEGTTNGGGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEG
Subjt:  MGDKEAVEEGTTNGGGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEG

Query:  KDEAKFSIESRTMWCKRYEARKARYRLCRGR
        KDEAKFSIESRTMWCKRYEARKARYRLCRGR
Subjt:  KDEAKFSIESRTMWCKRYEARKARYRLCRGR

A0A6J1FZ16 uncharacterized protein LOC1114491941.2e-4678.26Show/hide
Query:  NGGGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEGKDEAKFSIESRT
        NG   LNP AKEW+P+ D APEEDRCLFLTFSNG PL+EHQIV+FFTR +G+CIERVYVHY +GG + PLFGKVVFVASSIPAIIL GKDEAKFSIES+T
Subjt:  NGGGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEGKDEAKFSIESRT

Query:  MWCKRYEARKARYRL
        +WCKRYEARK R+R+
Subjt:  MWCKRYEARKARYRL

A0A6J1IWW8 uncharacterized protein LOC1114792144.7e-7098.47Show/hide
Query:  MGDKEAVEEGTTNGGGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEG
        MGDKEAVEEGTTNGGGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTR+FGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEG
Subjt:  MGDKEAVEEGTTNGGGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEG

Query:  KDEAKFSIESRTMWCKRYEARKARYRLCRGR
        KDEAKF IESRTMWCKRYEARKARYRLCRGR
Subjt:  KDEAKFSIESRTMWCKRYEARKARYRLCRGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49290.1 unknown protein1.1e-1038.71Show/hide
Query:  EDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVV--FVASSIPAIILEGKDEAKFSIESRTMWCKRYEARKARY
        +DR +FLTFS GYP++E ++  +FTR+FG  IE V +   E   E PLF K+V     +S+   I+  +   KF+I+ + +W ++Y  RK  Y
Subjt:  EDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVV--FVASSIPAIILEGKDEAKFSIESRTMWCKRYEARKARY

AT1G64870.1 unknown protein1.4e-1029.73Show/hide
Query:  WSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGA-CIERVYVHYREGG------------KEPPLFGKVVFVASSIPAIILEGKDEAKFSIESR
        W+  H  A +++R +FLTFS G+P++  +++H FT  +G  C+E VY+   +GG            ++ PLF K+V  +      IL G+++ K+ I  +
Subjt:  WSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGA-CIERVYVHYREGG------------KEPPLFGKVVFVASSIPAIILEGKDEAKFSIESR

Query:  TMWCKRYEARK
         +W ++++  K
Subjt:  TMWCKRYEARK

AT3G45200.1 unknown protein5.4e-1029.41Show/hide
Query:  APEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGA-CIERVYVHY----------REGGKEPPLFGKVVFVASSIPAIILEGKDEAKFSIESRTMWCKRYEA
        A E DR LFLTFS GYP+T  +I+  FT+++G  C+E VY+ +              ++  LF ++V  + +    +L+ + + +  I  + +W ++Y+ 
Subjt:  APEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGA-CIERVYVHY----------REGGKEPPLFGKVVFVASSIPAIILEGKDEAKFSIESRTMWCKRYEA

Query:  RK
        R+
Subjt:  RK

AT5G11220.1 unknown protein4.5e-0927.55Show/hide
Query:  APEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGA-CIERVYV----------HYREGGKEPPLFGKVVFVASSIPAIILEGKDEAKFSIESRTMWCKRY
        A + +R +F+TFS G+P+++ ++  FFT+ +G  C+E VY+          +  + G++  LF K+V  + +    IL+G+   +F    + +W ++Y
Subjt:  APEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGA-CIERVYV----------HYREGGKEPPLFGKVVFVASSIPAIILEGKDEAKFSIESRTMWCKRY

AT5G13620.1 unknown protein8.0e-1436.17Show/hide
Query:  DSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEGKDEAKFSIESRTMWCKRYEARKA
        + A E+DR +FLTFS GYPL+E ++  +FTR+FG  IE + +   EG ++      V+  A+ IP I+ +G +  K++I  + +W ++Y  R +
Subjt:  DSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEGKDEAKFSIESRTMWCKRYEARKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGATAAGGAGGCAGTGGAGGAGGGGACTACCAACGGAGGAGGTGACCTCAACCCAAATGCAAAGGAGTGGAGCCCCATTCACGATTCCGCGCCGGAGGAAGATCG
CTGCCTGTTTCTGACCTTCTCCAATGGGTACCCGCTGACTGAGCACCAGATCGTCCACTTCTTCACCCGAAAATTCGGAGCGTGCATTGAGAGGGTGTATGTGCACTACC
GTGAGGGAGGGAAGGAGCCGCCGTTGTTTGGGAAGGTGGTGTTTGTGGCGTCTTCGATACCAGCCATCATTCTGGAAGGGAAAGATGAAGCCAAGTTTTCTATTGAGAGC
AGGACGATGTGGTGTAAGAGGTACGAGGCCAGAAAGGCTCGCTACAGGCTTTGCCGAGGGCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGATAAGGAGGCAGTGGAGGAGGGGACTACCAACGGAGGAGGTGACCTCAACCCAAATGCAAAGGAGTGGAGCCCCATTCACGATTCCGCGCCGGAGGAAGATCG
CTGCCTGTTTCTGACCTTCTCCAATGGGTACCCGCTGACTGAGCACCAGATCGTCCACTTCTTCACCCGAAAATTCGGAGCGTGCATTGAGAGGGTGTATGTGCACTACC
GTGAGGGAGGGAAGGAGCCGCCGTTGTTTGGGAAGGTGGTGTTTGTGGCGTCTTCGATACCAGCCATCATTCTGGAAGGGAAAGATGAAGCCAAGTTTTCTATTGAGAGC
AGGACGATGTGGTGTAAGAGGTACGAGGCCAGAAAGGCTCGCTACAGGCTTTGCCGAGGGCGATGA
Protein sequenceShow/hide protein sequence
MGDKEAVEEGTTNGGGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEGKDEAKFSIES
RTMWCKRYEARKARYRLCRGR