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Carg17676 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17676
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionp53 and DNA damage-regulated protein 1
Genome locationCarg_Chr12:4245312..4246387
RNA-Seq ExpressionCarg17676
SyntenyCarg17676
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
InterPro domainsIPR030482 - p53 and DNA damage-regulated protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582715.1 hypothetical protein SDJN03_22717, partial [Cucurbita argyrosperma subsp. sororia]5.1e-84100Show/hide
Query:  MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGT
        MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGT
Subjt:  MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGT

Query:  DVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK
        DVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK
Subjt:  DVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK

XP_008437793.1 PREDICTED: uncharacterized protein LOC103483126 [Cucumis melo]8.2e-8296.99Show/hide
Query:  MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGT
        MNETMRQFQQSLIELEAEAERLL+ARNELVENDRVRNGNREALTALRRRARTTKSSVPS FESIMKEVGG+ESRPLVKEICTTCGNHDSNERTWMMFPGT
Subjt:  MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGT

Query:  DVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK
        DVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLK++VTLTDKPK
Subjt:  DVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK

XP_022924314.1 uncharacterized protein LOC111431844 [Cucurbita moschata]1.1e-8399.4Show/hide
Query:  MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGT
        MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIM+EVGGSESRPLVKEICTTCGNHDSNERTWMMFPGT
Subjt:  MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGT

Query:  DVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK
        DVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK
Subjt:  DVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK

XP_022979536.1 uncharacterized protein LOC111479212 [Cucurbita maxima]1.8e-8198.19Show/hide
Query:  MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGT
        MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESR LVKEICTTCGNHDSNERTWMMFPGT
Subjt:  MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGT

Query:  DVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK
        DVFARVPFHAAHTILETD+SKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDK K
Subjt:  DVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK

XP_038894232.1 uncharacterized protein LOC120082900 [Benincasa hispida]6.2e-8296.99Show/hide
Query:  MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGT
        MNETMRQFQQSLIELEAEAE LL+ARNELVENDRVRNGNREALTALRR+ARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGT
Subjt:  MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGT

Query:  DVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK
        D+FARVPFHA+HTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK
Subjt:  DVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK

TrEMBL top hitse value%identityAlignment
A0A0A0L6Z1 p53 and DNA damage-regulated protein 13.3e-8195.78Show/hide
Query:  MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGT
        MNETMRQFQQSLIELEAEAERLL+AR+ELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEV G+ESRPLVKEICTTCGNHDSNERTWMMFPGT
Subjt:  MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGT

Query:  DVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK
        DVFARVPFHAAHTILETDQ+KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLK++VTLTDKPK
Subjt:  DVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK

A0A1S3AVF7 p53 and DNA damage-regulated protein 13.9e-8296.99Show/hide
Query:  MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGT
        MNETMRQFQQSLIELEAEAERLL+ARNELVENDRVRNGNREALTALRRRARTTKSSVPS FESIMKEVGG+ESRPLVKEICTTCGNHDSNERTWMMFPGT
Subjt:  MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGT

Query:  DVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK
        DVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLK++VTLTDKPK
Subjt:  DVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK

A0A5D3DB70 p53 and DNA damage-regulated protein 13.9e-8296.99Show/hide
Query:  MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGT
        MNETMRQFQQSLIELEAEAERLL+ARNELVENDRVRNGNREALTALRRRARTTKSSVPS FESIMKEVGG+ESRPLVKEICTTCGNHDSNERTWMMFPGT
Subjt:  MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGT

Query:  DVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK
        DVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLK++VTLTDKPK
Subjt:  DVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK

A0A6J1E8S8 p53 and DNA damage-regulated protein 15.5e-8499.4Show/hide
Query:  MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGT
        MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIM+EVGGSESRPLVKEICTTCGNHDSNERTWMMFPGT
Subjt:  MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGT

Query:  DVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK
        DVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK
Subjt:  DVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK

A0A6J1INZ0 p53 and DNA damage-regulated protein 18.8e-8298.19Show/hide
Query:  MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGT
        MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESR LVKEICTTCGNHDSNERTWMMFPGT
Subjt:  MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGT

Query:  DVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK
        DVFARVPFHAAHTILETD+SKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDK K
Subjt:  DVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15351.1 unknown protein4.8e-5663.75Show/hide
Query:  RQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFAR
        ++F   L ++EAEA+  L+ARN++VEND+ RN NREALTALR+RARTTK+SV SPF+S+MK++ GS ++PLV+E+C+TCG+HDS+E TWMM PG D+FA 
Subjt:  RQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFAR

Query:  VPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKP
        +PFHA HT+LE D+ K++FE+KKLQS VK+++L ISE GALAD ISPGV++SLV L DKP
Subjt:  VPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKP

AT3G15351.2 unknown protein1.0e-3763.06Show/hide
Query:  RQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFAR
        ++F   L ++EAEA+  L+ARN++VEND+ RN NREALTALR+RARTTK+SV SPF+S+MK++ GS ++PLV+E+C+TCG+HDS+E TWMM PG D+FA 
Subjt:  RQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFAR

Query:  VPFHAAHTILE
        +PFHA HT+LE
Subjt:  VPFHAAHTILE

AT3G15351.3 unknown protein6.1e-5167.15Show/hide
Query:  LVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQSKLDFEAKK
        +VEND+ RN NREALTALR+RARTTK+SV SPF+S+MK++ GS ++PLV+E+C+TCG+HDS+E TWMM PG D+FA +PFHA HT+LE D+ K++FE+KK
Subjt:  LVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQSKLDFEAKK

Query:  LQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKP
        LQS VK+++L ISE GALAD ISPGV++SLV L DKP
Subjt:  LQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGAGACGATGAGACAATTTCAACAGAGCTTAATTGAGCTAGAAGCTGAAGCAGAGCGTCTCCTTGTAGCCCGCAACGAATTGGTTGAAAACGATAGAGTGAGAAA
TGGGAATAGAGAAGCATTGACTGCTTTGAGGAGGCGAGCAAGGACAACAAAGTCTAGTGTTCCATCGCCTTTTGAGTCAATAATGAAGGAGGTGGGGGGTTCTGAATCAA
GGCCATTGGTGAAAGAGATTTGCACTACCTGCGGGAATCACGATTCTAATGAGCGCACATGGATGATGTTCCCAGGAACTGATGTGTTCGCCAGGGTACCATTTCATGCT
GCTCATACAATCTTGGAGACAGATCAGTCGAAACTTGACTTTGAGGCAAAGAAATTACAGAGTTATGTAAAAGACCAGTCCCTTCTGATTTCAGAAAAAGGTGCCCTTGC
TGACAAGATCAGTCCGGGGGTGCTCAAGTCATTAGTGACATTGACAGACAAACCAAAATGA
mRNA sequenceShow/hide mRNA sequence
TCTCACAGTGACAACTTTCATTTCTTCATATTTGTTTTGGGAGTCTGAAAGATTCTCTCTGTATATTACATGTTTGGACGTTATTGACGATGTCTCAGAGTGAATTTTAG
GTTGGAAAAAATGAATGAGACGATGAGACAATTTCAACAGAGCTTAATTGAGCTAGAAGCTGAAGCAGAGCGTCTCCTTGTAGCCCGCAACGAATTGGTTGAAAACGATA
GAGTGAGAAATGGGAATAGAGAAGCATTGACTGCTTTGAGGAGGCGAGCAAGGACAACAAAGTCTAGTGTTCCATCGCCTTTTGAGTCAATAATGAAGGAGGTGGGGGGT
TCTGAATCAAGGCCATTGGTGAAAGAGATTTGCACTACCTGCGGGAATCACGATTCTAATGAGCGCACATGGATGATGTTCCCAGGAACTGATGTGTTCGCCAGGGTACC
ATTTCATGCTGCTCATACAATCTTGGAGACAGATCAGTCGAAACTTGACTTTGAGGCAAAGAAATTACAGAGTTATGTAAAAGACCAGTCCCTTCTGATTTCAGAAAAAG
GTGCCCTTGCTGACAAGATCAGTCCGGGGGTGCTCAAGTCATTAGTGACATTGACAGACAAACCAAAATGA
Protein sequenceShow/hide protein sequence
MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHA
AHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK