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Carg17691 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17691
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein arv1 homolog isoform X1
Genome locationCarg_Chr12:4148056..4148418
RNA-Seq ExpressionCarg17691
SyntenyCarg17691
Gene Ontology termsGO:0006665 - sphingolipid metabolic process (biological process)
GO:0016125 - sterol metabolic process (biological process)
GO:0032366 - intracellular sterol transport (biological process)
GO:0097036 - regulation of plasma membrane sterol distribution (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0032541 - cortical endoplasmic reticulum (cellular component)
InterPro domainsIPR007290 - Arv1 protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582731.1 Protein ARV 1, partial [Cucurbita argyrosperma subsp. sororia]1.3e-1681.54Show/hide
Query:  HFVSNLFV--SHCLCRYRYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
        H +S +F+  S  + +YRYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
Subjt:  HFVSNLFV--SHCLCRYRYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
KAG7020677.1 Protein arv1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-36100Show/hide
Query:  MRPFARRTSHFVSNLFVSHCLCRYRYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIKGKEDLICP
        MRPFARRTSHFVSNLFVSHCLCRYRYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIKGKEDLICP
Subjt:  MRPFARRTSHFVSNLFVSHCLCRYRYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIKGKEDLICP
XP_022924656.1 protein arv1 homolog [Cucurbita moschata]1.3e-1681.54Show/hide
Query:  HFVSNLFV--SHCLCRYRYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
        H +S +F+  S  + +YRYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
Subjt:  HFVSNLFV--SHCLCRYRYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
XP_023527859.1 protein arv1 homolog isoform X5 [Cucurbita pepo subsp. pepo]1.3e-1681.54Show/hide
Query:  HFVSNLFV--SHCLCRYRYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
        H +S +F+  S  + +YRYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
Subjt:  HFVSNLFV--SHCLCRYRYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
XP_038893484.1 protein ARV 2-like [Benincasa hispida]5.6e-2084.85Show/hide
Query:  RTSHFVSNLFVSHCLCRYRYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
        RTS F S+LFVSHCLCRYRY +FFFAIIISSYFKIFLV MMIWEFPS VI IIDLFVLS+NV+AIK
Subjt:  RTSHFVSNLFVSHCLCRYRYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
TrEMBL top hitse value%identityAlignment
A0A0A0L5K8 Uncharacterized protein3.2e-1370.77Show/hide
Query:  HFVSNLFVSHCL--CRYRYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
        H +S +F++      R+RY++FFFAIIISSYFKIFLV MMIWEFPS VIFI+DLFVLSSNV+AIK
Subjt:  HFVSNLFVSHCL--CRYRYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
A0A1S4DSU3 protein arv1 homolog isoform X13.2e-1367.65Show/hide
Query:  TSHFVSNLFVSHCLCRYRYK--DFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIKG
        T H +S +F++     +R++  +FFFAIIISSYFKIFLV MMIWEFPS VIFI+DLFVLSSNV+AIKG
Subjt:  TSHFVSNLFVSHCLCRYRYK--DFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIKG
A0A6J1E9K8 protein arv1 homolog6.2e-1781.54Show/hide
Query:  HFVSNLFV--SHCLCRYRYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
        H +S +F+  S  + +YRYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
Subjt:  HFVSNLFV--SHCLCRYRYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
A0A6J1INC3 uncharacterized protein LOC111479047 isoform X24.0e-1680Show/hide
Query:  HFVSNLFV--SHCLCRYRYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
        H +S +F+  S  + +YRYK FFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
Subjt:  HFVSNLFV--SHCLCRYRYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
A0A6J1ISS9 protein arv1 homolog isoform X14.0e-1680Show/hide
Query:  HFVSNLFV--SHCLCRYRYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
        H +S +F+  S  + +YRYK FFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
Subjt:  HFVSNLFV--SHCLCRYRYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
SwissProt top hitse value%identityAlignment
Q54GD9 Protein arv1 homolog2.0e-0454.17Show/hide
Query:  RYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
        +Y     AII+SS+ K FLV MMIW++P     I+++FVLSSNV+AIK
Subjt:  RYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
Q5MK23 Protein ARV 21.3e-0656.25Show/hide
Query:  RYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
        R K+    I+ISSY KIFL  M +WEFP  VIFI+D+ VL+SN +A+K
Subjt:  RYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
Q5MK24 Protein ARV 11.6e-0652.08Show/hide
Query:  RYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
        R ++    I ISSYFKIFL+ M++WEFP  VIF +D+ +L+SN +A+K
Subjt:  RYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
Arabidopsis top hitse value%identityAlignment
AT1G01020.1 Arv1-like protein1.2e-0752.08Show/hide
Query:  RYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
        R ++    I ISSYFKIFL+ M++WEFP  VIF +D+ +L+SN +A+K
Subjt:  RYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
AT4G01510.1 Arv1-like protein8.9e-0856.25Show/hide
Query:  RYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK
        R K+    I+ISSY KIFL  M +WEFP  VIFI+D+ VL+SN +A+K
Subjt:  RYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTCCATTTGCCCGTAGGACGTCTCATTTTGTTTCTAATTTGTTTGTTTCTCATTGCTTGTGCAGGTACAGGTACAAAGACTTTTTCTTTGCCATCATTATTTCAAG
TTACTTCAAGATCTTTCTTGTTTGCATGATGATCTGGGAATTTCCATCTCCAGTGATCTTCATTATAGATTTATTTGTTTTATCATCCAATGTAATAGCAATTAAAGGCA
AGGAAGACTTAATTTGTCCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGTCCATTTGCCCGTAGGACGTCTCATTTTGTTTCTAATTTGTTTGTTTCTCATTGCTTGTGCAGGTACAGGTACAAAGACTTTTTCTTTGCCATCATTATTTCAAG
TTACTTCAAGATCTTTCTTGTTTGCATGATGATCTGGGAATTTCCATCTCCAGTGATCTTCATTATAGATTTATTTGTTTTATCATCCAATGTAATAGCAATTAAAGGCA
AGGAAGACTTAATTTGTCCGTAG
Protein sequenceShow/hide protein sequence
MRPFARRTSHFVSNLFVSHCLCRYRYKDFFFAIIISSYFKIFLVCMMIWEFPSPVIFIIDLFVLSSNVIAIKGKEDLICP