; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg17761 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17761
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionATP-dependent DNA helicase At3g02060, chloroplastic
Genome locationCarg_Chr04:17501141..17508330
RNA-Seq ExpressionCarg17761
SyntenyCarg17761
Gene Ontology termsGO:0000967 - rRNA 5'-end processing (biological process)
GO:0000956 - nuclear-transcribed mRNA catabolic process (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0006397 - mRNA processing (biological process)
GO:0071035 - nuclear polyadenylation-dependent rRNA catabolic process (biological process)
GO:0010587 - miRNA catabolic process (biological process)
GO:0060149 - negative regulation of posttranscriptional gene silencing (biological process)
GO:0005634 - nucleus (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0004534 - 5'-3' exoribonuclease activity (molecular function)
GO:0004386 - helicase activity (molecular function)
GO:0003723 - RNA binding (molecular function)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR037235 - TRCF-like, C-terminal D7 domai
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR014001 - Helicase superfamily 1/2, ATP-binding domain
IPR001650 - Helicase, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601968.1 ATP-dependent DNA helicase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.5e-26199.79Show/hide
Query:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI
        QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI
Subjt:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI

Query:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ
        KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ
Subjt:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ

Query:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV
        DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV
Subjt:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV

Query:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM
        DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEP SMEILLKKLYVRRMAADLGIYRIYASGKTVCM
Subjt:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM

Query:  ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY
        ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY
Subjt:  ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY

KAG7032665.1 ATP-dependent DNA helicase, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]5.9e-263100Show/hide
Query:  MQTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVP
        MQTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVP
Subjt:  MQTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVP

Query:  IKTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIV
        IKTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIV
Subjt:  IKTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIV

Query:  QDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSK
        QDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSK
Subjt:  QDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSK

Query:  VDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVC
        VDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVC
Subjt:  VDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVC

Query:  METKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY
        METKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY
Subjt:  METKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY

XP_022957218.1 ATP-dependent DNA helicase At3g02060, chloroplastic [Cucurbita moschata]2.3e-262100Show/hide
Query:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI
        QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI
Subjt:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI

Query:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ
        KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ
Subjt:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ

Query:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV
        DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV
Subjt:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV

Query:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM
        DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM
Subjt:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM

Query:  ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY
        ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY
Subjt:  ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY

XP_022990814.1 ATP-dependent DNA helicase At3g02060, chloroplastic [Cucurbita maxima]2.1e-26099.14Show/hide
Query:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI
        QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI
Subjt:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI

Query:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ
        KTHLS+FSKEKV SAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENF+LGAIKILICTNIVESGLDIQNANTIIVQ
Subjt:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ

Query:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV
        DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV
Subjt:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV

Query:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM
        DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRR HGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM
Subjt:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM

Query:  ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY
        ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY
Subjt:  ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY

XP_023529599.1 ATP-dependent DNA helicase At3g02060, chloroplastic [Cucurbita pepo subsp. pepo]2.5e-26199.57Show/hide
Query:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI
        QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI
Subjt:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI

Query:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ
        KTHLS+FSKEKV SAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ
Subjt:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ

Query:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV
        DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV
Subjt:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV

Query:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM
        DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM
Subjt:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM

Query:  ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY
        ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY
Subjt:  ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY

TrEMBL top hitse value%identityAlignment
A0A1S3CNQ6 ATP-dependent DNA helicase At3g02060, chloroplastic1.6e-25094.21Show/hide
Query:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI
        QTK+EK+KHLEMIKEGQLNI+VGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI
Subjt:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI

Query:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ
        KTHLSSFSKEKV SAIKYELERGGQ+FYV PRIKGLEEVK+FLEASFPDIEI LAHGKQYSKQLEETMENFALG IKILICTNIVESGLDIQNANTIIVQ
Subjt:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ

Query:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV
        DVQQFGLAQLYQLRGRVGRADKEA+AYLFYPDK+LLSD+ALERLAALE+CRELGQGFQLAERDMGIRGFGTIFGEQQ+GDVGNVGIDLFFEMLFDSLSKV
Subjt:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV

Query:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM
        DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKI+NGAE+AAETDIW LMQFTENLRR HGKEPYSMEILLKKLYVRRMAADLGI RIYASGK VCM
Subjt:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM

Query:  ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY
        ET MNKKVF+LIS+SM SEVHRNCL+FEEHQIKAGLLLELPREQLLNW+FECLVELHASLPALIKY
Subjt:  ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY

A0A5A7VIC8 ATP-dependent DNA helicase3.4e-23294.02Show/hide
Query:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI
        QTK+EK+KHLEMIKEGQLNI+VGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI
Subjt:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI

Query:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ
        KTHLSSFSKEKV SAIKYELERGGQ+FYV PRIKGLEEVK+FLEASFPDIEI LAHGKQYSKQLEETMENFALG IKILICTNIVESGLDIQNANTIIVQ
Subjt:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ

Query:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV
        DVQQFGLAQLYQLRGRVGRADKEA+AYLFYPDK+LLSD+ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQ+GDVGNVGIDLFFEMLFDSLSKV
Subjt:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV

Query:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM
        DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKI+NGAE+AAETDIW LMQFTENLRR HGKEPYSMEILLKKLYVRRMAADLGI RIYASGK VCM
Subjt:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM

Query:  ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAG
        ET MNKKVF+LIS+SM SEVHRNCL+FEEHQIK G
Subjt:  ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAG

A0A6J1CJT5 ATP-dependent DNA helicase At3g02060, chloroplastic isoform X18.7e-25295.06Show/hide
Query:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI
        QTK+EK+KHL+MIKEGQL+I+VGTHSLLGDRVVY+NLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI
Subjt:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI

Query:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ
        KTHLSSFSKEKV SAIKYELERGGQVFYV PRIKGLEEVKDFLEASFPDIEI LAHGKQYSKQLEETMENFALG IKILICTNIVESGLDIQNANTIIVQ
Subjt:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ

Query:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV
        DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDK+LLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQ+GDVGNVGIDLFFEMLFDSLSKV
Subjt:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV

Query:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM
        DEHRVVSVPYQSVKID+DI PHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGI RIYASGKTVCM
Subjt:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM

Query:  ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY
        ETKMN+KVFKLI++SM SEVH+NCL+FEEH IKAGLLLELP+EQLLNWIFECLVELHASLPALIKY
Subjt:  ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY

A0A6J1GZL7 ATP-dependent DNA helicase At3g02060, chloroplastic1.1e-262100Show/hide
Query:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI
        QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI
Subjt:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI

Query:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ
        KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ
Subjt:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ

Query:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV
        DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV
Subjt:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV

Query:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM
        DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM
Subjt:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM

Query:  ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY
        ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY
Subjt:  ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY

A0A6J1JT22 ATP-dependent DNA helicase At3g02060, chloroplastic1.0e-26099.14Show/hide
Query:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI
        QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI
Subjt:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI

Query:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ
        KTHLS+FSKEKV SAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENF+LGAIKILICTNIVESGLDIQNANTIIVQ
Subjt:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ

Query:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV
        DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV
Subjt:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV

Query:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM
        DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRR HGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM
Subjt:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM

Query:  ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY
        ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY
Subjt:  ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY

SwissProt top hitse value%identityAlignment
F4JFJ3 ATP-dependent DNA helicase At3g02060, chloroplastic8.7e-22584.33Show/hide
Query:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI
        QTK+EK+++LEMIK G LNI+VGTHSLLG RVVYSNLGLLVVDEEQRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDASLI+TPPPER+PI
Subjt:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI

Query:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ
        KTHLSSF KEKV  AIK EL+RGGQVFYV PRIKGLEEV DFLE +FPDI+I +AHGKQYSKQLEETME FA G IKILICTNIVESGLDIQNANTII+Q
Subjt:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ

Query:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV
        DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDK+LLSDQALERL+ALEECRELGQGFQLAE+DMGIRGFGTIFGEQQ+GDVGNVGIDLFFEMLF+SLSKV
Subjt:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV

Query:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM
        +E R+ SVPY  VKIDI+INP LPSEY+NYLENPM+II+ AEKAAE D+W+LMQFTENLRRQ+GKEPYSMEI+LKKLYVRRMAADLG+ RIYASGK V M
Subjt:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM

Query:  ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY
        +T M+KKVFKLI++SM  +V+R+ L +E  QI A LLLELPREQLLNW+F+CL ELHASLPALIKY
Subjt:  ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY

Q49V12 Transcription-repair-coupling factor8.8e-8440.85Show/hide
Query:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI
        +T  E  +  E +K G ++IVVGTH LLG  + Y +LGLL+VDEEQRFGV+ KE+I S K ++DVLTL+ATPIPRTL++++ G RD S+I TPP  R P+
Subjt:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI

Query:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ
        +T++   +   +  A++ EL R GQVFY++ +++ + E ++ L+   PD  IG+AHG+   + LEETM +F      I++ T I+E+G+D+ NANT+I++
Subjt:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ

Query:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV
        D  +FGL+QLYQLRGRVGR+ +  +AY  +P   +LS+ A +RL A++E  ELG GF++A RD+ IRG G + G+QQ G + +VG DL+ +ML +++++ 
Subjt:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV

Query:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEK-AAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTV
           +        ++I+++I+ +LP+EYI   ++ ++I     K  +ET    LM   + L  +    P  +E LL+ + ++  A   G+  I   GK V
Subjt:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEK-AAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTV

Q4L3G0 Transcription-repair-coupling factor2.8e-8239.61Show/hide
Query:  TKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIK
        TK  K+   E +K G ++IVVGTH LLG  + Y +LGLL+VDEEQRFGV+ KE+I + KT++DVLTL+ATPIPRTL++++ G RD S+I TPP  R P++
Subjt:  TKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIK

Query:  THLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQD
        T++   +   +  A++ EL R GQVFY++ R++ + E ++ L+   PD  I +AHG+   + LEETM +F  G   IL+ T I+E+G+D+ NANT+I+++
Subjt:  THLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQD

Query:  VQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKVD
          +FGL+QLYQLRGRVGR+ +  +AY  +    +L++ A ERL A++E  ELG GF++A RD+ IRG G + G+QQ G + +VG DL+ +ML +++++  
Subjt:  VQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKVD

Query:  EHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGK--TVC
          +        V+++++++ +LP+EYI   +  ++I     K    +   L    + L  +    P  +E LL+ + ++  A   G+  I   GK   V 
Subjt:  EHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGK--TVC

Query:  METKMNKKV
        + TK  +++
Subjt:  METKMNKKV

Q55750 Transcription-repair-coupling factor1.9e-10245.11Show/hide
Query:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI
        +T SEK + L  +K G+L+IVVGT  +LG  V + +LGLLV+DEEQRFGV QKEKI + KT +DVLTL+ATPIPRTLY++L+G R+ SLITTPPP R PI
Subjt:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI

Query:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ
        KTHLS ++ E + +AI+ EL+RGGQVFYV PRI+G+EE+   L    P   I + HG+    +LE TM  F  G   IL+CT I+E+GLDI   NTIIV+
Subjt:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ

Query:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV
        D Q+FGLAQLYQLRGRVGR+  +AHA+L YP++  L+++A  RL AL+E  +LG G+QLA RDM IRG G + G +QSG +  +G + + EML D++ ++
Subjt:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV

Query:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGK-TVC
            +  V  +  +ID+ +   +PS+YI  LE  M           TD   L +   +   ++G  P  +E L K + ++ +A  LG  RI   GK  + 
Subjt:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGK-TVC

Query:  METKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWI
        +ET M +  +KL++E++ + +    +   +  +  GL +  P +Q+ N I
Subjt:  METKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWI

Q5HRQ2 Transcription-repair-coupling factor4.1e-8139.2Show/hide
Query:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI
        +T  E  +  E +K G ++IVVGTH LLG  + Y +LGLL+VDEEQRFGV+ KE+I + K ++DVLTL+ATPIPRTL++++ G RD S+I TPP  R P+
Subjt:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI

Query:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ
        +T++   +   +  A++ EL R GQVFY++ +++ + E ++ L+   PD  I +AHG+   + LEETM +F      IL+ T I+E+G+D+ NANT+I++
Subjt:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ

Query:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV
        +  +FGL+QLYQLRGRVGR+ +  +AY  +P   +L++ A ERL A++E  ELG GF++A RD+ IRG G + G+QQ G + +VG DL+ +ML +++++ 
Subjt:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV

Query:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTV
           +  S     +++++ ++ +LP+EYI   +  ++I     K    +   L    + L  +    P  +E LL  + ++  A   G+  I   GK++
Subjt:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTV

Arabidopsis top hitse value%identityAlignment
AT2G01440.1 DEAD/DEAH box RNA helicase family protein1.5e-4134.7Show/hide
Query:  TKSEKDKHLEMIKE----GQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIAS--FKTSI---------------------DVLTLSATPIP
        T S   K   MI++    G ++ ++GTHSL+ +++ YS L + VVDE+QRFGV Q+ K  S  + TS+                      VL +SATPIP
Subjt:  TKSEKDKHLEMIKE----GQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIAS--FKTSI---------------------DVLTLSATPIP

Query:  RTLYLALTGFRDASLITTPPPERVPIKTHLSSFSK---EKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEAS---------FPDIEIGLAHGKQYSK
        R+L LAL G    + IT  P  R+P++TH+   ++   ++V S +  +L+ GG+V+ V+P I   E++     AS         FP    GL HG+  S 
Subjt:  RTLYLALTGFRDASLITTPPPERVPIKTHLSSFSK---EKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEAS---------FPDIEIGLAHGKQYSK

Query:  QLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAER
          EE +  F  G  +IL+ T ++E G+D+ +A+ ++V + ++FG+AQL+QLRGRVGR  +++        K LL   +   L  L    +   GF LA  
Subjt:  QLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAER

Query:  DMGIRGFGTIFGEQQSG
        D+ +RG G + G++QSG
Subjt:  DMGIRGFGTIFGEQQSG

AT3G02060.1 DEAD/DEAH box helicase, putative6.2e-22684.33Show/hide
Query:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI
        QTK+EK+++LEMIK G LNI+VGTHSLLG RVVYSNLGLLVVDEEQRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDASLI+TPPPER+PI
Subjt:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI

Query:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ
        KTHLSSF KEKV  AIK EL+RGGQVFYV PRIKGLEEV DFLE +FPDI+I +AHGKQYSKQLEETME FA G IKILICTNIVESGLDIQNANTII+Q
Subjt:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ

Query:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV
        DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDK+LLSDQALERL+ALEECRELGQGFQLAE+DMGIRGFGTIFGEQQ+GDVGNVGIDLFFEMLF+SLSKV
Subjt:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV

Query:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM
        +E R+ SVPY  VKIDI+INP LPSEY+NYLENPM+II+ AEKAAE D+W+LMQFTENLRRQ+GKEPYSMEI+LKKLYVRRMAADLG+ RIYASGK V M
Subjt:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM

Query:  ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY
        +T M+KKVFKLI++SM  +V+R+ L +E  QI A LLLELPREQLLNW+F+CL ELHASLPALIKY
Subjt:  ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY

AT3G02060.2 DEAD/DEAH box helicase, putative6.2e-22684.33Show/hide
Query:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI
        QTK+EK+++LEMIK G LNI+VGTHSLLG RVVYSNLGLLVVDEEQRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDASLI+TPPPER+PI
Subjt:  QTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI

Query:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ
        KTHLSSF KEKV  AIK EL+RGGQVFYV PRIKGLEEV DFLE +FPDI+I +AHGKQYSKQLEETME FA G IKILICTNIVESGLDIQNANTII+Q
Subjt:  KTHLSSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQ

Query:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV
        DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDK+LLSDQALERL+ALEECRELGQGFQLAE+DMGIRGFGTIFGEQQ+GDVGNVGIDLFFEMLF+SLSKV
Subjt:  DVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKV

Query:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM
        +E R+ SVPY  VKIDI+INP LPSEY+NYLENPM+II+ AEKAAE D+W+LMQFTENLRRQ+GKEPYSMEI+LKKLYVRRMAADLG+ RIYASGK V M
Subjt:  DEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCM

Query:  ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY
        +T M+KKVFKLI++SM  +V+R+ L +E  QI A LLLELPREQLLNW+F+CL ELHASLPALIKY
Subjt:  ETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY

AT5G26742.1 DEAD box RNA helicase (RH3)1.3e-0527.34Show/hide
Query:  SSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQDVQQ
        +S SK  + S +     +GG+        +  +EV   L  S   I     HG     Q E T+  F  G   +L+ T++   GLDI N + +I  ++  
Subjt:  SSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQDVQQ

Query:  FGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALER
             +++  GR GRA KE  A L +      + ++LER
Subjt:  FGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALER

AT5G26742.2 DEAD box RNA helicase (RH3)1.3e-0527.34Show/hide
Query:  SSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQDVQQ
        +S SK  + S +     +GG+        +  +EV   L  S   I     HG     Q E T+  F  G   +L+ T++   GLDI N + +I  ++  
Subjt:  SSFSKEKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQDVQQ

Query:  FGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALER
             +++  GR GRA KE  A L +      + ++LER
Subjt:  FGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALER


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGACAAAATCAGAGAAAGATAAGCATCTAGAAATGATCAAAGAAGGCCAATTGAACATTGTTGTTGGGACTCACTCACTCCTTGGAGATCGTGTTGTGTATAGTAA
TTTAGGGCTTCTAGTTGTTGATGAGGAACAGAGGTTTGGTGTCAAACAGAAGGAGAAAATTGCTTCTTTTAAAACTTCAATTGATGTTCTTACTCTCTCCGCAACACCGA
TACCGCGGACCCTGTATTTAGCATTGACTGGATTTCGCGATGCTAGCTTGATTACAACTCCTCCACCGGAAAGAGTTCCAATAAAGACCCATCTCTCATCATTCAGTAAA
GAAAAAGTGAATTCGGCTATTAAGTATGAGCTGGAACGTGGAGGCCAAGTCTTTTATGTTTTTCCTCGAATTAAAGGACTCGAGGAAGTGAAGGATTTTCTTGAGGCGAG
TTTTCCAGACATTGAAATAGGTCTTGCTCATGGAAAGCAATACTCGAAGCAACTTGAAGAAACCATGGAAAATTTTGCGCTTGGTGCTATTAAGATTCTTATATGTACGA
ATATTGTTGAAAGTGGTCTGGATATTCAAAATGCAAACACCATCATTGTTCAGGATGTTCAACAATTTGGGTTAGCACAATTATACCAGCTGCGTGGAAGGGTGGGCCGG
GCAGACAAGGAAGCTCATGCGTACTTGTTTTACCCAGACAAGGCCCTGCTATCTGATCAAGCACTGGAAAGGCTTGCCGCCCTTGAAGAATGCCGTGAACTTGGGCAAGG
TTTCCAACTCGCCGAGAGAGACATGGGCATAAGAGGCTTTGGTACCATCTTCGGTGAGCAACAAAGTGGTGATGTTGGAAATGTGGGCATTGATCTCTTCTTTGAAATGC
TTTTTGACAGCTTGTCTAAGGTTGACGAACACAGGGTAGTCTCTGTCCCATACCAGTCAGTAAAGATTGATATAGATATTAATCCTCATTTGCCCTCTGAGTACATTAAT
TATTTGGAGAATCCCATGAAAATTATTAATGGAGCTGAAAAGGCGGCTGAGACAGACATCTGGGCTTTAATGCAATTTACTGAAAATTTGCGCCGTCAACATGGAAAAGA
GCCTTACTCCATGGAGATTCTGCTGAAGAAGCTTTATGTGAGGAGAATGGCAGCGGATCTAGGAATTTATCGGATATATGCTTCAGGAAAGACCGTTTGCATGGAAACTA
AAATGAATAAGAAAGTTTTCAAGTTGATATCTGAATCAATGGTATCAGAGGTGCATCGAAATTGTTTGACTTTTGAGGAACATCAGATCAAGGCTGGACTTCTCTTAGAG
CTACCAAGAGAACAACTGCTAAATTGGATCTTTGAGTGCTTGGTGGAACTTCATGCTTCCCTCCCAGCCTTGATCAAATACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGACAAAATCAGAGAAAGATAAGCATCTAGAAATGATCAAAGAAGGCCAATTGAACATTGTTGTTGGGACTCACTCACTCCTTGGAGATCGTGTTGTGTATAGTAA
TTTAGGGCTTCTAGTTGTTGATGAGGAACAGAGGTTTGGTGTCAAACAGAAGGAGAAAATTGCTTCTTTTAAAACTTCAATTGATGTTCTTACTCTCTCCGCAACACCGA
TACCGCGGACCCTGTATTTAGCATTGACTGGATTTCGCGATGCTAGCTTGATTACAACTCCTCCACCGGAAAGAGTTCCAATAAAGACCCATCTCTCATCATTCAGTAAA
GAAAAAGTGAATTCGGCTATTAAGTATGAGCTGGAACGTGGAGGCCAAGTCTTTTATGTTTTTCCTCGAATTAAAGGACTCGAGGAAGTGAAGGATTTTCTTGAGGCGAG
TTTTCCAGACATTGAAATAGGTCTTGCTCATGGAAAGCAATACTCGAAGCAACTTGAAGAAACCATGGAAAATTTTGCGCTTGGTGCTATTAAGATTCTTATATGTACGA
ATATTGTTGAAAGTGGTCTGGATATTCAAAATGCAAACACCATCATTGTTCAGGATGTTCAACAATTTGGGTTAGCACAATTATACCAGCTGCGTGGAAGGGTGGGCCGG
GCAGACAAGGAAGCTCATGCGTACTTGTTTTACCCAGACAAGGCCCTGCTATCTGATCAAGCACTGGAAAGGCTTGCCGCCCTTGAAGAATGCCGTGAACTTGGGCAAGG
TTTCCAACTCGCCGAGAGAGACATGGGCATAAGAGGCTTTGGTACCATCTTCGGTGAGCAACAAAGTGGTGATGTTGGAAATGTGGGCATTGATCTCTTCTTTGAAATGC
TTTTTGACAGCTTGTCTAAGGTTGACGAACACAGGGTAGTCTCTGTCCCATACCAGTCAGTAAAGATTGATATAGATATTAATCCTCATTTGCCCTCTGAGTACATTAAT
TATTTGGAGAATCCCATGAAAATTATTAATGGAGCTGAAAAGGCGGCTGAGACAGACATCTGGGCTTTAATGCAATTTACTGAAAATTTGCGCCGTCAACATGGAAAAGA
GCCTTACTCCATGGAGATTCTGCTGAAGAAGCTTTATGTGAGGAGAATGGCAGCGGATCTAGGAATTTATCGGATATATGCTTCAGGAAAGACCGTTTGCATGGAAACTA
AAATGAATAAGAAAGTTTTCAAGTTGATATCTGAATCAATGGTATCAGAGGTGCATCGAAATTGTTTGACTTTTGAGGAACATCAGATCAAGGCTGGACTTCTCTTAGAG
CTACCAAGAGAACAACTGCTAAATTGGATCTTTGAGTGCTTGGTGGAACTTCATGCTTCCCTCCCAGCCTTGATCAAATACTAG
Protein sequenceShow/hide protein sequence
MQTKSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSK
EKVNSAIKYELERGGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGR
ADKEAHAYLFYPDKALLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYIN
YLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCMETKMNKKVFKLISESMVSEVHRNCLTFEEHQIKAGLLLE
LPREQLLNWIFECLVELHASLPALIKY