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Carg17762 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17762
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:17508515..17510159
RNA-Seq ExpressionCarg17762
SyntenyCarg17762
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601969.1 hypothetical protein SDJN03_07202, partial [Cucurbita argyrosperma subsp. sororia]4.5e-10399.44Show/hide
Query:  MDITFEHCFKDTSWSYLCRIYSSAQDLLVYTTLSRLQEGYNITQGRVEVGTNKHRVIEHFRRKFGCACPHGRPSWPREGLGLWALALLDRTSRWVDRVRV
        MDITFEHCFKDTSWSYLCRIYSSAQDLLVYTTLSRLQEGY+ITQGRVEVGTNKHRVIEHFRRKFGCACPHGRPSWPREGLGLWALALLDRTSRWVDRVRV
Subjt:  MDITFEHCFKDTSWSYLCRIYSSAQDLLVYTTLSRLQEGYNITQGRVEVGTNKHRVIEHFRRKFGCACPHGRPSWPREGLGLWALALLDRTSRWVDRVRV

Query:  VGLLVRNWVEDLWALSWAETRMGFAPGRLWACGLVCPGILDRFTRRVRVDPTLWLWTSFSLQKLQILIPPSGSSTTVVLR
        VGLLVRNWVEDLWALSWAETRMGFAPGRLWACGLVCPGILDRFTRRVRVDPTLWLWTSFSLQKLQILIPPSGSSTTVVLR
Subjt:  VGLLVRNWVEDLWALSWAETRMGFAPGRLWACGLVCPGILDRFTRRVRVDPTLWLWTSFSLQKLQILIPPSGSSTTVVLR
KAG7032666.1 hypothetical protein SDJN02_06716, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-115100Show/hide
Query:  MLQCQAKVYYILLVSWNKLMDITFEHCFKDTSWSYLCRIYSSAQDLLVYTTLSRLQEGYNITQGRVEVGTNKHRVIEHFRRKFGCACPHGRPSWPREGLG
        MLQCQAKVYYILLVSWNKLMDITFEHCFKDTSWSYLCRIYSSAQDLLVYTTLSRLQEGYNITQGRVEVGTNKHRVIEHFRRKFGCACPHGRPSWPREGLG
Subjt:  MLQCQAKVYYILLVSWNKLMDITFEHCFKDTSWSYLCRIYSSAQDLLVYTTLSRLQEGYNITQGRVEVGTNKHRVIEHFRRKFGCACPHGRPSWPREGLG

Query:  LWALALLDRTSRWVDRVRVVGLLVRNWVEDLWALSWAETRMGFAPGRLWACGLVCPGILDRFTRRVRVDPTLWLWTSFSLQKLQILIPPSGSSTTVVLR
        LWALALLDRTSRWVDRVRVVGLLVRNWVEDLWALSWAETRMGFAPGRLWACGLVCPGILDRFTRRVRVDPTLWLWTSFSLQKLQILIPPSGSSTTVVLR
Subjt:  LWALALLDRTSRWVDRVRVVGLLVRNWVEDLWALSWAETRMGFAPGRLWACGLVCPGILDRFTRRVRVDPTLWLWTSFSLQKLQILIPPSGSSTTVVLR
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCAATGCCAAGCAAAAGTATATTACATTTTGTTAGTAAGTTGGAACAAGCTGATGGATATCACTTTCGAGCATTGTTTCAAGGATACAAGCTGGAGTTATCTTTG
CAGAATATATAGCAGTGCCCAGGATCTGCTGGTGTATACGACGTTATCGAGACTCCAAGAAGGCTACAACATCACTCAGGGAAGGGTTGAAGTAGGAACCAACAAGCATA
GAGTTATTGAACATTTCAGAAGAAAATTTGGCTGTGCCTGCCCTCATGGCCGCCCTTCCTGGCCACGTGAGGGGTTGGGTCTGTGGGCCTTGGCGCTTCTGGACCGCACG
AGTCGTTGGGTCGACCGAGTTCGTGTAGTGGGCCTGTTGGTGAGGAACTGGGTCGAGGACTTGTGGGCCTTGAGTTGGGCCGAGACACGCATGGGCTTCGCGCCTGGTAG
ATTGTGGGCCTGTGGGCTCGTCTGCCCTGGGATACTGGATCGGTTTACACGTCGGGTTCGGGTTGACCCAACTCTATGGCTCTGGACCTCTTTTTCTCTGCAGAAGTTAC
AAATTTTGATTCCTCCTTCGGGGAGCTCAACGACGGTGGTTCTACGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGCAATGCCAAGCAAAAGTATATTACATTTTGTTAGTAAGTTGGAACAAGCTGATGGATATCACTTTCGAGCATTGTTTCAAGGATACAAGCTGGAGTTATCTTTG
CAGAATATATAGCAGTGCCCAGGATCTGCTGGTGTATACGACGTTATCGAGACTCCAAGAAGGCTACAACATCACTCAGGGAAGGGTTGAAGTAGGAACCAACAAGCATA
GAGTTATTGAACATTTCAGAAGAAAATTTGGCTGTGCCTGCCCTCATGGCCGCCCTTCCTGGCCACGTGAGGGGTTGGGTCTGTGGGCCTTGGCGCTTCTGGACCGCACG
AGTCGTTGGGTCGACCGAGTTCGTGTAGTGGGCCTGTTGGTGAGGAACTGGGTCGAGGACTTGTGGGCCTTGAGTTGGGCCGAGACACGCATGGGCTTCGCGCCTGGTAG
ATTGTGGGCCTGTGGGCTCGTCTGCCCTGGGATACTGGATCGGTTTACACGTCGGGTTCGGGTTGACCCAACTCTATGGCTCTGGACCTCTTTTTCTCTGCAGAAGTTAC
AAATTTTGATTCCTCCTTCGGGGAGCTCAACGACGGTGGTTCTACGGTAG
Protein sequenceShow/hide protein sequence
MLQCQAKVYYILLVSWNKLMDITFEHCFKDTSWSYLCRIYSSAQDLLVYTTLSRLQEGYNITQGRVEVGTNKHRVIEHFRRKFGCACPHGRPSWPREGLGLWALALLDRT
SRWVDRVRVVGLLVRNWVEDLWALSWAETRMGFAPGRLWACGLVCPGILDRFTRRVRVDPTLWLWTSFSLQKLQILIPPSGSSTTVVLR