; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg17829 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17829
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRING-type E3 ubiquitin transferase
Genome locationCarg_Chr10:4292229..4292645
RNA-Seq ExpressionCarg17829
SyntenyCarg17829
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR003613 - U box domain
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590132.1 E3 ubiquitin-protein ligase PUB22, partial [Cucurbita argyrosperma subsp. sororia]1.3e-69100Show/hide
Query:  MAEIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKNCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVIL
        MAEIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKNCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVIL
Subjt:  MAEIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKNCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVIL

Query:  KEAMRGRSSRLECLNKLEAFLAETERNKIYLQ
        KEAMRGRSSRLECLNKLEAFLAETERNKIYLQ
Subjt:  KEAMRGRSSRLECLNKLEAFLAETERNKIYLQ

KAG7023798.1 E3 ubiquitin-protein ligase PUB22, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-73100Show/hide
Query:  MAEIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKNCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVIL
        MAEIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKNCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVIL
Subjt:  MAEIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKNCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVIL

Query:  KEAMRGRSSRLECLNKLEAFLAETERNKIYLQASIHTI
        KEAMRGRSSRLECLNKLEAFLAETERNKIYLQASIHTI
Subjt:  KEAMRGRSSRLECLNKLEAFLAETERNKIYLQASIHTI

XP_022961129.1 E3 ubiquitin-protein ligase PUB23-like [Cucurbita moschata]1.9e-6898.48Show/hide
Query:  MAEIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKNCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVIL
        M EIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKNCPVTKQPLIGTDLTPNHTLRRVIQGW CVNAEHGAERVRSPKGEGDGGHVVKVIL
Subjt:  MAEIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKNCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVIL

Query:  KEAMRGRSSRLECLNKLEAFLAETERNKIYLQ
        KEAMRGRSSRLECLNKLEAFLAETERNKIYLQ
Subjt:  KEAMRGRSSRLECLNKLEAFLAETERNKIYLQ

XP_022987530.1 E3 ubiquitin-protein ligase PUB23-like [Cucurbita maxima]6.2e-6796.21Show/hide
Query:  MAEIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKNCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVIL
        MAEIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCK CPVTKQPLIG DLTPNHTLRRVIQGWSCVN EHG ERVRSPKGEGDGGHVVK+IL
Subjt:  MAEIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKNCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVIL

Query:  KEAMRGRSSRLECLNKLEAFLAETERNKIYLQ
        KEAMRGRSSRLECLNKLEAFLAETERNKIYLQ
Subjt:  KEAMRGRSSRLECLNKLEAFLAETERNKIYLQ

XP_023516896.1 E3 ubiquitin-protein ligase PUB22-like [Cucurbita pepo subsp. pepo]2.8e-6797.73Show/hide
Query:  MAEIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKNCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVIL
        MAEIEVPSDFLCPISLQIMSDPVTISTGITY+RESIEKWLLFCKNC VTKQPLIGTDLTPNHTLRRVIQGW CVNAEHGAERVRSPKGEGDGGHVVKVIL
Subjt:  MAEIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKNCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVIL

Query:  KEAMRGRSSRLECLNKLEAFLAETERNKIYLQ
        KEAMRGRSSRLECLNKLEAFLAETERNKIYLQ
Subjt:  KEAMRGRSSRLECLNKLEAFLAETERNKIYLQ

TrEMBL top hitse value%identityAlignment
A0A0A0LXW1 RING-type E3 ubiquitin transferase7.1e-4569.34Show/hide
Query:  MAEIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKN----CPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVV
        MAEIEVPSDFLCPISLQ+M DPVTISTGITYDRESI+KWL  CKN    CPV+KQ L   DLTPNHTLRRVIQGW  +N  HG E++ +P+ E D G VV
Subjt:  MAEIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKN----CPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVV

Query:  KVILKEAMRG-RSSRLECLNKLEAFLAETERNKIYLQ
        K+ILKEAM+  RSS LECL +L++ +AE E NKIYLQ
Subjt:  KVILKEAMRG-RSSRLECLNKLEAFLAETERNKIYLQ

A0A1S3BNV9 RING-type E3 ubiquitin transferase5.1e-4368.61Show/hide
Query:  MAEIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKN----CPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVV
        MAEIEVPSDFLCPISLQIM DPVTISTGITYDRE I+KWL  CKN    CPV+KQ L   DLTPNHTL RVIQGW  ++  HG E++ +PK E D G  V
Subjt:  MAEIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKN----CPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVV

Query:  KVILKEAMRG-RSSRLECLNKLEAFLAETERNKIYLQ
        K ILKEAM+  RSSRLECL +L++ +AE E NKIYLQ
Subjt:  KVILKEAMRG-RSSRLECLNKLEAFLAETERNKIYLQ

A0A6J1EH89 RING-type E3 ubiquitin transferase1.6e-4168.38Show/hide
Query:  IEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKN-------CPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVV
        +EVPSDFLCPISLQIM DPVTISTGITYDRESIEKWL   KN       CPVTK PL   DLTPNHTLRR+IQGW  +NA  G E + +PKGE D G VV
Subjt:  IEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKN-------CPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVV

Query:  KVILKEAMRGRSSRLECLNKLEAFLAETERNKIYLQ
        K++ KEAMR  SSRLECL +L+A + E ERNK YLQ
Subjt:  KVILKEAMRGRSSRLECLNKLEAFLAETERNKIYLQ

A0A6J1HD28 RING-type E3 ubiquitin transferase9.3e-6998.48Show/hide
Query:  MAEIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKNCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVIL
        M EIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKNCPVTKQPLIGTDLTPNHTLRRVIQGW CVNAEHGAERVRSPKGEGDGGHVVKVIL
Subjt:  MAEIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKNCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVIL

Query:  KEAMRGRSSRLECLNKLEAFLAETERNKIYLQ
        KEAMRGRSSRLECLNKLEAFLAETERNKIYLQ
Subjt:  KEAMRGRSSRLECLNKLEAFLAETERNKIYLQ

A0A6J1JH48 RING-type E3 ubiquitin transferase3.0e-6796.21Show/hide
Query:  MAEIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKNCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVIL
        MAEIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCK CPVTKQPLIG DLTPNHTLRRVIQGWSCVN EHG ERVRSPKGEGDGGHVVK+IL
Subjt:  MAEIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKNCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVIL

Query:  KEAMRGRSSRLECLNKLEAFLAETERNKIYLQ
        KEAMRGRSSRLECLNKLEAFLAETERNKIYLQ
Subjt:  KEAMRGRSSRLECLNKLEAFLAETERNKIYLQ

SwissProt top hitse value%identityAlignment
Q84TG3 E3 ubiquitin-protein ligase PUB235.7e-3149.25Show/hide
Query:  EIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCK--NCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVIL
        EIE+P  FLCPISL+IM DPV +STGITYDR+SIEKWL   K  +CPVTKQ +   DLTPNHTLRR+IQ W  +NA +G ER+ +P+       + K+I 
Subjt:  EIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCK--NCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVIL

Query:  KEAMRGRSSRLECLNKLEAFLAETERNKIYLQAS
        +++     ++++CL +L   ++E   NK  L+A+
Subjt:  KEAMRGRSSRLECLNKLEAFLAETERNKIYLQAS

Q9FXA4 U-box domain-containing protein 261.1e-2141.79Show/hide
Query:  IEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCK-NCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVILK-
        I++P  F CPISL +MSDPVTISTG TYDR SI+ W+      CPVT+  L    L PNHTLRR+IQ W   N  +G ER+ +PK   D   V  ++ + 
Subjt:  IEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCK-NCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVILK-

Query:  EAMRGR----SSRLECLNKLEAFLAETERNKIYL
         A+ G      SR   + +L     ++E+N++ +
Subjt:  EAMRGR----SSRLECLNKLEAFLAETERNKIYL

Q9LT79 U-box domain-containing protein 251.5e-2342.03Show/hide
Query:  IEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKN--CPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVILK
        I++P  F CPISL++M DPVT+ TG TYDR SIE W+    N  CPVT+ PL    L PNHTLRR+IQ W   N  +G ER+ +PK   D    V+ +L 
Subjt:  IEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKN--CPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVILK

Query:  EAMR------GRSSRLECLNKLEAFLAETERNKIYLQA
        +A           SR   L +L  F  ++++N++ + A
Subjt:  EAMR------GRSSRLECLNKLEAFLAETERNKIYLQA

Q9SF15 E3 ubiquitin-protein ligase PUB241.2e-2545.26Show/hide
Query:  EIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKNCPVTKQPL-IGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVI--
        EIE+P+ F+CPISL+IM DPVT  +GITYDR++I KWL    +CPVTKQPL + +DLTPNH LRR+IQ W   N   G  R+ +P+      +VV+ I  
Subjt:  EIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKNCPVTKQPL-IGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVI--

Query:  LKEAMRGRSSRLECLNKLEAFLAETERNKIYLQASIH
        LK+  +    R E L KLE    +    ++  +  +H
Subjt:  LKEAMRGRSSRLECLNKLEAFLAETERNKIYLQASIH

Q9SVC6 E3 ubiquitin-protein ligase PUB221.0e-3253.73Show/hide
Query:  EIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCK--NCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVIL
        EIE+PS FLCPISL IM DPV +STGITYDRESIEKWL   K  +CPVTKQ +  TDLTPNHTLRR+IQ W  +NA +G ER+ +PK       + K+I 
Subjt:  EIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCK--NCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVIL

Query:  KEAMRGRSSRLECLNKLEAFLAETERNKIYLQAS
        KE+     ++++CL +L   ++E   NK  L+A+
Subjt:  KEAMRGRSSRLECLNKLEAFLAETERNKIYLQAS

Arabidopsis top hitse value%identityAlignment
AT1G49780.1 plant U-box 267.6e-2341.79Show/hide
Query:  IEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCK-NCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVILK-
        I++P  F CPISL +MSDPVTISTG TYDR SI+ W+      CPVT+  L    L PNHTLRR+IQ W   N  +G ER+ +PK   D   V  ++ + 
Subjt:  IEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCK-NCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVILK-

Query:  EAMRGR----SSRLECLNKLEAFLAETERNKIYL
         A+ G      SR   + +L     ++E+N++ +
Subjt:  EAMRGR----SSRLECLNKLEAFLAETERNKIYL

AT2G35930.1 plant U-box 234.0e-3249.25Show/hide
Query:  EIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCK--NCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVIL
        EIE+P  FLCPISL+IM DPV +STGITYDR+SIEKWL   K  +CPVTKQ +   DLTPNHTLRR+IQ W  +NA +G ER+ +P+       + K+I 
Subjt:  EIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCK--NCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVIL

Query:  KEAMRGRSSRLECLNKLEAFLAETERNKIYLQAS
        +++     ++++CL +L   ++E   NK  L+A+
Subjt:  KEAMRGRSSRLECLNKLEAFLAETERNKIYLQAS

AT3G11840.1 plant U-box 248.7e-2745.26Show/hide
Query:  EIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKNCPVTKQPL-IGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVI--
        EIE+P+ F+CPISL+IM DPVT  +GITYDR++I KWL    +CPVTKQPL + +DLTPNH LRR+IQ W   N   G  R+ +P+      +VV+ I  
Subjt:  EIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKNCPVTKQPL-IGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVI--

Query:  LKEAMRGRSSRLECLNKLEAFLAETERNKIYLQASIH
        LK+  +    R E L KLE    +    ++  +  +H
Subjt:  LKEAMRGRSSRLECLNKLEAFLAETERNKIYLQASIH

AT3G19380.1 plant U-box 251.1e-2442.03Show/hide
Query:  IEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKN--CPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVILK
        I++P  F CPISL++M DPVT+ TG TYDR SIE W+    N  CPVT+ PL    L PNHTLRR+IQ W   N  +G ER+ +PK   D    V+ +L 
Subjt:  IEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKN--CPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVILK

Query:  EAMR------GRSSRLECLNKLEAFLAETERNKIYLQA
        +A           SR   L +L  F  ++++N++ + A
Subjt:  EAMR------GRSSRLECLNKLEAFLAETERNKIYLQA

AT3G52450.1 plant U-box 227.3e-3453.73Show/hide
Query:  EIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCK--NCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVIL
        EIE+PS FLCPISL IM DPV +STGITYDRESIEKWL   K  +CPVTKQ +  TDLTPNHTLRR+IQ W  +NA +G ER+ +PK       + K+I 
Subjt:  EIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCK--NCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVIL

Query:  KEAMRGRSSRLECLNKLEAFLAETERNKIYLQAS
        KE+     ++++CL +L   ++E   NK  L+A+
Subjt:  KEAMRGRSSRLECLNKLEAFLAETERNKIYLQAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAAATCGAGGTTCCTTCCGACTTTCTATGCCCGATTTCTCTACAAATCATGAGCGACCCAGTGACGATATCGACCGGGATCACATACGATAGAGAGAGCATTGA
GAAATGGCTCTTGTTTTGCAAGAACTGCCCGGTGACAAAGCAGCCACTGATCGGTACAGATTTGACGCCGAACCATACGCTGCGTCGGGTGATTCAAGGGTGGAGCTGTG
TCAACGCCGAGCACGGGGCGGAGCGGGTCCGAAGCCCTAAGGGTGAGGGTGATGGAGGGCATGTTGTTAAGGTGATCCTTAAGGAGGCAATGAGAGGTAGAAGCTCAAGG
CTTGAGTGCCTGAACAAATTGGAAGCTTTCTTGGCTGAGACTGAGAGGAACAAAATCTACTTGCAGGCAAGCATTCATACTATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGAAATCGAGGTTCCTTCCGACTTTCTATGCCCGATTTCTCTACAAATCATGAGCGACCCAGTGACGATATCGACCGGGATCACATACGATAGAGAGAGCATTGA
GAAATGGCTCTTGTTTTGCAAGAACTGCCCGGTGACAAAGCAGCCACTGATCGGTACAGATTTGACGCCGAACCATACGCTGCGTCGGGTGATTCAAGGGTGGAGCTGTG
TCAACGCCGAGCACGGGGCGGAGCGGGTCCGAAGCCCTAAGGGTGAGGGTGATGGAGGGCATGTTGTTAAGGTGATCCTTAAGGAGGCAATGAGAGGTAGAAGCTCAAGG
CTTGAGTGCCTGAACAAATTGGAAGCTTTCTTGGCTGAGACTGAGAGGAACAAAATCTACTTGCAGGCAAGCATTCATACTATTTAA
Protein sequenceShow/hide protein sequence
MAEIEVPSDFLCPISLQIMSDPVTISTGITYDRESIEKWLLFCKNCPVTKQPLIGTDLTPNHTLRRVIQGWSCVNAEHGAERVRSPKGEGDGGHVVKVILKEAMRGRSSR
LECLNKLEAFLAETERNKIYLQASIHTI