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Carg17832 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17832
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncoiled-coil domain-containing protein R3HCC1L
Genome locationCarg_Chr10:4303759..4311371
RNA-Seq ExpressionCarg17832
SyntenyCarg17832
Gene Ontology termsNA
InterPro domainsIPR039884 - Coiled-coil domain-containing protein R3HC1/R3HCL


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023801.1 hypothetical protein SDJN02_14827 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-40100Show/hide
Query:  MDKEEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQDQVSFYFIF
        MDKEEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQDQVSFYFIF
Subjt:  MDKEEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQDQVSFYFIF
XP_022961195.1 coiled-coil domain-containing protein R3HCC1L [Cucurbita moschata]1.6e-37100Show/hide
Query:  MDKEEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQDQVS
        MDKEEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQDQVS
Subjt:  MDKEEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQDQVS
XP_022988104.1 coiled-coil domain-containing protein R3HCC1L isoform X1 [Cucurbita maxima]6.6e-3695.56Show/hide
Query:  MDKEEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQDQVS
        MDKEEER+QRRSNWSETVEDLVTAGDTDAAISLLESV+SDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDI AKALVLKQ DQVS
Subjt:  MDKEEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQDQVS
XP_022988105.1 coiled-coil domain-containing protein R3HCC1L isoform X2 [Cucurbita maxima]6.6e-3695.56Show/hide
Query:  MDKEEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQDQVS
        MDKEEER+QRRSNWSETVEDLVTAGDTDAAISLLESV+SDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDI AKALVLKQ DQVS
Subjt:  MDKEEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQDQVS
XP_023516771.1 coiled-coil domain-containing protein R3HCC1L [Cucurbita pepo subsp. pepo]1.6e-37100Show/hide
Query:  MDKEEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQDQVS
        MDKEEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQDQVS
Subjt:  MDKEEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQDQVS
TrEMBL top hitse value%identityAlignment
A0A6J1H9N8 coiled-coil domain-containing protein R3HCC1L7.6e-38100Show/hide
Query:  MDKEEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQDQVS
        MDKEEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQDQVS
Subjt:  MDKEEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQDQVS
A0A6J1JC58 coiled-coil domain-containing protein R3HCC1L isoform X33.2e-3695.56Show/hide
Query:  MDKEEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQDQVS
        MDKEEER+QRRSNWSETVEDLVTAGDTDAAISLLESV+SDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDI AKALVLKQ DQVS
Subjt:  MDKEEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQDQVS
A0A6J1JIN7 coiled-coil domain-containing protein R3HCC1L isoform X23.2e-3695.56Show/hide
Query:  MDKEEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQDQVS
        MDKEEER+QRRSNWSETVEDLVTAGDTDAAISLLESV+SDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDI AKALVLKQ DQVS
Subjt:  MDKEEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQDQVS
A0A6J1JKP2 coiled-coil domain-containing protein R3HCC1L isoform X13.2e-3695.56Show/hide
Query:  MDKEEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQDQVS
        MDKEEER+QRRSNWSETVEDLVTAGDTDAAISLLESV+SDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDI AKALVLKQ DQVS
Subjt:  MDKEEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQDQVS
A0A6J1JLB3 coiled-coil domain-containing protein R3HCC1L isoform X43.2e-3695.56Show/hide
Query:  MDKEEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQDQVS
        MDKEEER+QRRSNWSETVEDLVTAGDTDAAISLLESV+SDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDI AKALVLKQ DQVS
Subjt:  MDKEEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQDQVS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G22120.1 unknown protein1.9e-1247.78Show/hide
Query:  EEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQ-------TSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQ
        EEE +    NWSE VEDLV AGD  AAIS LES+ ++LQ       + E +    QL+AALT L+ LYSS+G SLK+D++  ++ ++KQ+
Subjt:  EEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQ-------TSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAAGAAGAAGAACGGCAACAGCGGCGATCGAACTGGAGTGAGACAGTGGAGGATCTCGTCACTGCCGGTGACACTGATGCTGCAATTTCTCTTCTCGAATCGGT
GATTTCTGACCTCCAAACTTCAGAAAACTCTAATCCAGATCCTCAATTGGCCGCCGCTCTCACCGACTTGTCTGCTCTTTACTCTTCTAAAGGTTTCTCTCTTAAAGCCG
ACGACATTGCGGCTAAAGCTTTGGTTCTTAAACAGCAAGACCAAGTCTCTTTCTATTTCATCTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATACGACTGAGATATTTATAAACTTTCTGCGCGACTTCCTCATCTTCCTCTGTTGCTTGATTATCAACCGGAGCGATGGACAAAGAAGAAGAACGGCAACAGCGGCGATC
GAACTGGAGTGAGACAGTGGAGGATCTCGTCACTGCCGGTGACACTGATGCTGCAATTTCTCTTCTCGAATCGGTGATTTCTGACCTCCAAACTTCAGAAAACTCTAATC
CAGATCCTCAATTGGCCGCCGCTCTCACCGACTTGTCTGCTCTTTACTCTTCTAAAGGTTTCTCTCTTAAAGCCGACGACATTGCGGCTAAAGCTTTGGTTCTTAAACAG
CAAGACCAAGTCTCTTTCTATTTCATCTTTTAGGTTCGCGAAGATTGTGAAAGAGGATCGAACTTCATCCGCAACTGTTACGCTGTCTTCTCATAATTCAGTCGATGAAG
CTTCCGTTGGAACTGGTACTTTGGATCATACGAGAGATTGTCCAGACAATGCTGTACCCTGTGATGATGATGATTGGGAAGCTATTGCAGATCGCCCACCAAATGAATTA
CTCTCCTTGCAATGTGAACCTGATAAACCTGAAATTTTAATCAGAGAGACAACAGACCAAACCACAATCAGAGAGACAACAGACAAAACCACTAGACGGCGTGGGAGGGG
AACATTTTCATATAAGAAACATGAATTATATAGTGATAGGCTATCTGATTCTTCAACTACCAATGATACAAAGGACGAAGATGCTTCTCATGAGTTGGAGGTGGGGCGTA
AGGAGCTAAAAAGTGCACAATATGGTACTCAACATGTTCTGGTCCTAGCTGACTTTCCACCGAGTACCAAAACAATAGATCTTGAAAGGCTACTTGGAAATTTCAAGAAT
TCTGGAGTTGTCATTCGCTGGGTCAATGATACGGTCGCACTTGCAGTTTTTCCGACACCGTCAACTGCACTTGAAGTTCTCAATCATGTTAGATGCCCTTTCACTATACG
CCTACTTGATGAAAATGATACTCTATTGAGCTCAATTCCACCGAGAGATTTGGAGCCTCCAAAGCAGAGGCCAAAGACATCGGCCAGAACTGCCCAACGACTGATTGCTC
AAGGAATGGGATTGAAGCTGCCGGCTTCCACCACTGCCTTCGGGTCCAAAGAACTAAGAAAACAGGAAGAAGACAGGAGGAATCGCATTGTGTCAAGACAAAAATTGAGA
GATGAAGCTTGGGGAGAATGATGATCCAAGTTAGTATCTTCTTACTTTTTCTTGAACAAACGGATACTGTCTGTGTCCCCATAATAACCATATAAAGACAAATCAACCAC
GGCCACACTGTTAAATGATCAATCTCCTTGTTTTCCTTTATTTTTTGCTCCCTTTGCCTTACTCCATTACCCATCTATTGTGTGTGATTAAAGAAACATCAAACCTCATT
CTTGTGGCTGCAACTGTTCTGTTTTTGGATTCATTGGTCTGTACAACTTTGTTACTTGACTTTGTACATTTGCCTGTCAGACCAGGTCCAATGAAAATGAGTGATATATT
TACTAGTTATTCCTCACGAAATTTTTTCGTCATAATGTTAGTTTCATATCATTGAATTCATACCATGAATCTTCTCGTATTTAGTAATATGATACTTTGGTTATTATTCT
ATCACTTCTCAACTAAGCGTACTGTTTGTTTGATAAGCTCAACCACATATTCACTATGACTAACTATGGTTGTGTCATTACGAGACTTGTAGCTTCTTTGTTTCGAACTC
TAGGGTATTTATTTCACCTTGGCTATGTCAAGGGTATGACTCTGATACCAATTGTTAAGAACGATCTTCAAAATATCTCCACAATGGTATGACATTGTCCACTTTGGACA
ATAAACTCTTGAGAAATGGTTTCATGCTATTGGAGATATTTGTGTCTTTACATATGTACTATGAATCAACGTAGATTTGGTCACATTCCTAAAAAAATGTTCTTTTTCTT
ACAATAAAGGGTAAATAGGTTATTATTCAGGTCCTTGATGAAGTTTCATATCATGGAAGCTTTAGTTTTCTTTCAGCATAGAGGGAAGCTCAAGGATGAAAGAATTCATT
TATTCTTCAAGGAGTGAGACTCTAAGCTATTTGGTAAGTGTGAGATCCCACTTCGATAGGAGAGGGGAACAAGCATTCCTTATAAGGGTGTGGAAAGTTCTCTACAGTAA
ACGAGATTTAAAATCGTGAGGCTGATGGTGAGACATAACGAGCTAAAACAGACAAATATCTGCTAGCGGTGGACTTGAACTATTACAGTAAGCCTCTCTCATCAATGAAT
AACTTGAACTTTTCTTTCCTTGCGAAGAAAATGCTTATGAATCCTCGTTCCTTTTCCTCTCATATTGACCAAAATTCTTTTGGTTAAAAGACTTTTGAAAAAGATAGTGT
GAATGCAATGAAGCCAAGGAAAATTTGGTTCATAGGTAATGAAGTGTCCTTTTTTTGGTATAAAAACAA
Protein sequenceShow/hide protein sequence
MDKEEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSALYSSKGFSLKADDIAAKALVLKQQDQVSFYFIF