; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg17836 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17836
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationCarg_Chr10:4359492..4360622
RNA-Seq ExpressionCarg17836
SyntenyCarg17836
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590140.1 Chlorophyll a-b binding protein 8, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.0e-148100Show/hide
Query:  MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGLLQNKAFLTWMEGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGVIG
        MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGLLQNKAFLTWMEGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGVIG
Subjt:  MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGLLQNKAFLTWMEGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGVIG

Query:  AIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAYPGGPLFNPLGFGK
        AIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAYPGGPLFNPLGFGK
Subjt:  AIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAYPGGPLFNPLGFGK

Query:  DEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH
        DEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH
Subjt:  DEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH

XP_022960627.1 photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic-like [Cucurbita moschata]3.2e-13389.01Show/hide
Query:  MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGL-LQNKAFLTWME------------GLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTS+VGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQ  +  L   +K  L++++            GLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGL-LQNKAFLTWME------------GLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
        VINGRFAMLGV+GAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
Subjt:  VINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH
        PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLL+HLSDPINNNLLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH

XP_022988182.1 photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic-like [Cucurbita maxima]9.6e-13086.81Show/hide
Query:  MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGL-LQNKAFLTWME------------GLSDPEGTGGFIEPRWLAYGE
        MAT+ALVSSSLTS+ GAARQRFG KPCLGSSTKQASFVVRAEATPPVKQ  +  L   +K  L++++            GLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGL-LQNKAFLTWME------------GLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
        VINGRFAMLGV+GAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
Subjt:  VINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH
        PGGPLFNPLGFGKDEKSM DLKLKEVKNGRLAMLAILG FIQGLVTGVGPYQNLL+HLSDP+NNNLLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH

XP_023515627.1 photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic-like [Cucurbita pepo subsp. pepo]5.1e-13187.91Show/hide
Query:  MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGL-LQNKAFLTWME------------GLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTS+VGAARQRFG KPCLGSSTKQASFVVRAEATPPVKQ  +  L   +K  L++++            GLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGL-LQNKAFLTWME------------GLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
        VINGRFAMLGV+GAIAPEILGSLGLIP ETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLG+ERFLGGSGDPAY
Subjt:  VINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH
        PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLL+HLSDPINNNLLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH

XP_038879830.1 photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic [Benincasa hispida]2.1e-12483.52Show/hide
Query:  MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGL-LQNKAFLTWME------------GLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTS+VGAARQR G KP  GSS K ASFVVRAEATPPVKQ     L   +K  L++++            GLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGL-LQNKAFLTWME------------GLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
        VINGRFAMLG  GAIAPEI GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDWAKPGSMGKQYFLGLE+FLGGSGDPAY
Subjt:  VINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH
        PGGPLFNPLGFGKDEKS+KDLKLKEVKNGRLAMLAILG F+QGLVTGVGPYQNLL+HLSDP+NNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH

TrEMBL top hitse value%identityAlignment
A0A1S3BPK7 Chlorophyll a-b binding protein, chloroplastic1.3e-12483.52Show/hide
Query:  MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGL-LQNKAFLTWME------------GLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTS+VGAARQR G KP  GSS K ASFVVRA ATPPVKQ     L   +K  LT+++            GLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGL-LQNKAFLTWME------------GLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
        VINGRFAMLG  GAIAPEI GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLE+FLGGSGDPAY
Subjt:  VINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH
        PGGPLFNPLGFGKDEKSMK+LKLKE+KNGRLAMLAILG FIQGLVTGVGPYQNLL+HLSDP+NNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH

A0A5D3DX73 Chlorophyll a-b binding protein, chloroplastic1.3e-12483.52Show/hide
Query:  MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGL-LQNKAFLTWME------------GLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTS+VGAARQR G KP  GSS K ASFVVRA ATPPVKQ     L   +K  LT+++            GLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGL-LQNKAFLTWME------------GLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
        VINGRFAMLG  GAIAPEI GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLE+FLGGSGDPAY
Subjt:  VINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH
        PGGPLFNPLGFGKDEKSMK+LKLKE+KNGRLAMLAILG FIQGLVTGVGPYQNLL+HLSDP+NNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH

A0A6J1DIF2 Chlorophyll a-b binding protein, chloroplastic1.3e-12482.42Show/hide
Query:  MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGL-LQNKAFLTWME------------GLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTS+VGAAR RFG +P  GSS K ASFVVRAEATPPVKQ  +  L   +K  L++++            GLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGL-LQNKAFLTWME------------GLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
        VINGR+AMLGV+GAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDWA PGSMGKQYFLGLE+FLGGSG+PAY
Subjt:  VINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH
        PGGPLFNPLGFGKDEKS+KDLKLKEVKNGRLAMLAILG F+QGLVTGVGPYQNLL+HLSDP+NNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH

A0A6J1H7Y6 Chlorophyll a-b binding protein, chloroplastic1.6e-13389.01Show/hide
Query:  MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGL-LQNKAFLTWME------------GLSDPEGTGGFIEPRWLAYGE
        MATQALVSSSLTS+VGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQ  +  L   +K  L++++            GLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGL-LQNKAFLTWME------------GLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
        VINGRFAMLGV+GAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
Subjt:  VINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH
        PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLL+HLSDPINNNLLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH

A0A6J1JLI6 Chlorophyll a-b binding protein, chloroplastic4.7e-13086.81Show/hide
Query:  MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGL-LQNKAFLTWME------------GLSDPEGTGGFIEPRWLAYGE
        MAT+ALVSSSLTS+ GAARQRFG KPCLGSSTKQASFVVRAEATPPVKQ  +  L   +K  L++++            GLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGL-LQNKAFLTWME------------GLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
        VINGRFAMLGV+GAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
Subjt:  VINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH
        PGGPLFNPLGFGKDEKSM DLKLKEVKNGRLAMLAILG FIQGLVTGVGPYQNLL+HLSDP+NNNLLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH

SwissProt top hitse value%identityAlignment
P27521 Chlorophyll a-b binding protein 4, chloroplastic3.1e-3038.4Show/hide
Query:  LGSSTKQASFVVRAEATPPVKQTEHYGLLQNKAFLTWMEGLSDPE-------GTGGFIEP----------RWLAYGEVINGRFAMLGVIGAIAPEILGSL
        +GSS K +SF V A      K+ E            W+ GL+ P+       G  GF +P          +W    E++NGR+AMLGV G + PE+   +
Subjt:  LGSSTKQASFVVRAEATPPVKQTEHYGLLQNKAFLTWMEGLSDPE-------GTGGFIEP----------RWLAYGEVINGRFAMLGVIGAIAPEILGSL

Query:  GLI-PPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMG-----KQYFLGLERFLGGSGDPAYPGGPLFNPLGFGKDEKS
        G+I  PE    W+       AG   Y+A   TLFV+E  L  + E RR+QD   PGS+      KQY L         G+  YPGG +FNPL F   +++
Subjt:  GLI-PPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMG-----KQYFLGLERFLGGSGDPAYPGGPLFNPLGFGKDEKS

Query:  MKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLL
            K KE+ NGRLAMLA LG  +Q  VTG GP++NLL HLSDP +N ++
Subjt:  MKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLL

P27522 Chlorophyll a-b binding protein 8, chloroplastic7.2e-11276.28Show/hide
Query:  MATQALVSSSLTST-VGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGL-LQNKAFLTWME------------GLSDPEGTGGFIEPRWLAYG
        MATQAL+SSS  ST   AARQ  G +    S T++ASFVVRA +TPPVKQ  +  L   +K  L++++            GLSDPEGTGGFIEP+WLAYG
Subjt:  MATQALVSSSLTST-VGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGL-LQNKAFLTWME------------GLSDPEGTGGFIEPRWLAYG

Query:  EVINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPA
        EVINGRFAMLG  GAIAPEILG  GLIP ETAL WF+TGVIPPAGTYNYWAD YTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLE+ LGGSGDPA
Subjt:  EVINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH
        YPGGPLFNPLGFGKDEKSMK+LKLKE+KNGRLAMLAILG FIQ LVTGVGPYQNLL+HL+DP+NNN+LTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH

Q32904 Chlorophyll a-b binding protein 3, chloroplastic8.3e-10873.09Show/hide
Query:  MATQALV-SSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQ--TEHYGLLQNKAFLTWME------------GLSDPEGTGGFIEPRWLAY
        MATQALV SSSLT    A RQ F  +    S       +VRA ATPPVKQ   +      +K  L++++            GLSDPEGTGGFIEPRWLAY
Subjt:  MATQALV-SSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQ--TEHYGLLQNKAFLTWME------------GLSDPEGTGGFIEPRWLAY

Query:  GEVINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDP
        GEVINGRFAMLG +GAIAPE LG +GLIP ETAL WF+TGVIPPAGTYNYWAD YTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLE+  GGSG+P
Subjt:  GEVINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDP

Query:  AYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH
        AYPGGP FNPLGFGKDEKS+K+LKLKEVKNGRLAMLAILG FIQGLVTGVGPYQNLL+H++DP+NNN+LTSLKFH
Subjt:  AYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH

Q9C639 Photosystem I chlorophyll a/b-binding protein 5, chloroplastic8.4e-3641.12Show/hide
Query:  TWMEGLS---------------DPEGTGGFIEP-RWLAYGEVINGRFAMLGVIGAIAPEILGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVL
        TW+ GL+               DP G G   E  +W    E+++ RFAMLGV G +  ++L + G+      LP W++ G +     +++ A   TL V+
Subjt:  TWMEGLS---------------DPEGTGGFIEP-RWLAYGEVINGRFAMLGVIGAIAPEILGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVL

Query:  EMALMGFAEHRRFQDWAKPGSMGKQ--YFLGLERFLGGSGDPAYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLN
        +  LMGFAE +R+ D+  PGS  K+  +F GLE  L G  +P YPGGPL NPLG  KD ++  D KLKE+KNGRLAM+A+LG F+Q  VT  GP  NL+ 
Subjt:  EMALMGFAEHRRFQDWAKPGSMGKQ--YFLGLERFLGGSGDPAYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLN

Query:  HLSDPINNNLLTSL
        HLS+P +  ++ +L
Subjt:  HLSDPINNNLLTSL

Q9SY97 Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic1.3e-11375.46Show/hide
Query:  MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGL-LQNKAFLTWME------------GLSDPEGTGGFIEPRWLAYGE
        MA QALVSSSLTS+V  ARQ FG KP   +S K++SFVV+A ATPPVKQ  +  L   +   L++++            GLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGL-LQNKAFLTWME------------GLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
        +INGRFAMLG  GAIAPEILG  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFVLEMALMGFAEHRR QDW  PGSMGKQYFLGLE+ L GSG+PAY
Subjt:  VINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH
        PGGP FNPLGFGKDEKS+K+LKLKEVKNGRLAMLAILG FIQGLVTGVGPYQNLL+HL+DP+NNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH

Arabidopsis top hitse value%identityAlignment
AT1G45474.1 photosystem I light harvesting complex gene 56.0e-3741.12Show/hide
Query:  TWMEGLS---------------DPEGTGGFIEP-RWLAYGEVINGRFAMLGVIGAIAPEILGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVL
        TW+ GL+               DP G G   E  +W    E+++ RFAMLGV G +  ++L + G+      LP W++ G +     +++ A   TL V+
Subjt:  TWMEGLS---------------DPEGTGGFIEP-RWLAYGEVINGRFAMLGVIGAIAPEILGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVL

Query:  EMALMGFAEHRRFQDWAKPGSMGKQ--YFLGLERFLGGSGDPAYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLN
        +  LMGFAE +R+ D+  PGS  K+  +F GLE  L G  +P YPGGPL NPLG  KD ++  D KLKE+KNGRLAM+A+LG F+Q  VT  GP  NL+ 
Subjt:  EMALMGFAEHRRFQDWAKPGSMGKQ--YFLGLERFLGGSGDPAYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLN

Query:  HLSDPINNNLLTSL
        HLS+P +  ++ +L
Subjt:  HLSDPINNNLLTSL

AT1G45474.2 photosystem I light harvesting complex gene 56.0e-3741.12Show/hide
Query:  TWMEGLS---------------DPEGTGGFIEP-RWLAYGEVINGRFAMLGVIGAIAPEILGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVL
        TW+ GL+               DP G G   E  +W    E+++ RFAMLGV G +  ++L + G+      LP W++ G +     +++ A   TL V+
Subjt:  TWMEGLS---------------DPEGTGGFIEP-RWLAYGEVINGRFAMLGVIGAIAPEILGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVL

Query:  EMALMGFAEHRRFQDWAKPGSMGKQ--YFLGLERFLGGSGDPAYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLN
        +  LMGFAE +R+ D+  PGS  K+  +F GLE  L G  +P YPGGPL NPLG  KD ++  D KLKE+KNGRLAM+A+LG F+Q  VT  GP  NL+ 
Subjt:  EMALMGFAEHRRFQDWAKPGSMGKQ--YFLGLERFLGGSGDPAYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLN

Query:  HLSDPINNNLLTSL
        HLS+P +  ++ +L
Subjt:  HLSDPINNNLLTSL

AT1G61520.1 photosystem I light harvesting complex gene 39.3e-11575.46Show/hide
Query:  MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGL-LQNKAFLTWME------------GLSDPEGTGGFIEPRWLAYGE
        MA QALVSSSLTS+V  ARQ FG KP   +S K++SFVV+A ATPPVKQ  +  L   +   L++++            GLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGL-LQNKAFLTWME------------GLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
        +INGRFAMLG  GAIAPEILG  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFVLEMALMGFAEHRR QDW  PGSMGKQYFLGLE+ L GSG+PAY
Subjt:  VINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH
        PGGP FNPLGFGKDEKS+K+LKLKEVKNGRLAMLAILG FIQGLVTGVGPYQNLL+HL+DP+NNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH

AT1G61520.2 photosystem I light harvesting complex gene 32.9e-10087.63Show/hide
Query:  GLSDPEGTGGFIEPRWLAYGEVINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGS
        GLSDPEGTGGFIEPRWLAYGE+INGRFAMLG  GAIAPEILG  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFVLEMALMGFAEHRR QDW  PGS
Subjt:  GLSDPEGTGGFIEPRWLAYGEVINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGS

Query:  MGKQYFLGLERFLGGSGDPAYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH
        MGKQYFLGLE+ L GSG+PAYPGGP FNPLGFGKDEKS+K+LKLKEVKNGRLAMLAILG FIQGLVTGVGPYQNLL+HL+DP+NNN+LTSLKFH
Subjt:  MGKQYFLGLERFLGGSGDPAYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH

AT1G61520.3 photosystem I light harvesting complex gene 39.3e-11575.46Show/hide
Query:  MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGL-LQNKAFLTWME------------GLSDPEGTGGFIEPRWLAYGE
        MA QALVSSSLTS+V  ARQ FG KP   +S K++SFVV+A ATPPVKQ  +  L   +   L++++            GLSDPEGTGGFIEPRWLAYGE
Subjt:  MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGL-LQNKAFLTWME------------GLSDPEGTGGFIEPRWLAYGE

Query:  VINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY
        +INGRFAMLG  GAIAPEILG  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFVLEMALMGFAEHRR QDW  PGSMGKQYFLGLE+ L GSG+PAY
Subjt:  VINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH
        PGGP FNPLGFGKDEKS+K+LKLKEVKNGRLAMLAILG FIQGLVTGVGPYQNLL+HL+DP+NNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTCAGGCACTTGTTTCATCTTCCTTAACCTCCACGGTGGGCGCCGCCAGACAAAGATTTGGTCCCAAACCCTGTCTTGGATCCTCCACAAAACAAGCTTCTTT
TGTTGTTAGAGCTGAAGCCACTCCTCCCGTTAAGCAAACCGAGCATTATGGTTTGCTTCAAAACAAAGCCTTTCTTACTTGGATGGAAGGGCTATCGGACCCTGAAGGCA
CGGGAGGGTTCATCGAGCCGAGATGGTTGGCATACGGGGAGGTAATCAACGGGCGGTTCGCAATGTTGGGAGTAATAGGAGCCATAGCCCCAGAGATATTAGGGTCACTA
GGGCTAATCCCACCAGAAACAGCCCTCCCATGGTTCAAAACTGGGGTGATCCCACCAGCAGGGACCTACAACTATTGGGCAGACCCCTACACACTATTTGTACTTGAAAT
GGCTCTAATGGGGTTCGCTGAACATAGAAGATTTCAAGATTGGGCTAAGCCAGGGTCCATGGGGAAGCAGTACTTCTTGGGTCTAGAGAGGTTCTTGGGTGGGTCAGGGG
ACCCAGCTTACCCAGGTGGGCCCTTGTTCAACCCTCTAGGGTTTGGTAAAGATGAGAAGTCAATGAAGGATTTGAAGCTAAAAGAAGTGAAGAATGGAAGGCTTGCAATG
TTGGCCATATTGGGTTTGTTTATACAAGGACTTGTCACTGGCGTTGGCCCTTACCAAAACCTTTTGAACCATTTGTCTGACCCTATTAACAATAACCTCTTGACAAGCCT
TAAATTTCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCACTCAGGCACTTGTTTCATCTTCCTTAACCTCCACGGTGGGCGCCGCCAGACAAAGATTTGGTCCCAAACCCTGTCTTGGATCCTCCACAAAACAAGCTTCTTT
TGTTGTTAGAGCTGAAGCCACTCCTCCCGTTAAGCAAACCGAGCATTATGGTTTGCTTCAAAACAAAGCCTTTCTTACTTGGATGGAAGGGCTATCGGACCCTGAAGGCA
CGGGAGGGTTCATCGAGCCGAGATGGTTGGCATACGGGGAGGTAATCAACGGGCGGTTCGCAATGTTGGGAGTAATAGGAGCCATAGCCCCAGAGATATTAGGGTCACTA
GGGCTAATCCCACCAGAAACAGCCCTCCCATGGTTCAAAACTGGGGTGATCCCACCAGCAGGGACCTACAACTATTGGGCAGACCCCTACACACTATTTGTACTTGAAAT
GGCTCTAATGGGGTTCGCTGAACATAGAAGATTTCAAGATTGGGCTAAGCCAGGGTCCATGGGGAAGCAGTACTTCTTGGGTCTAGAGAGGTTCTTGGGTGGGTCAGGGG
ACCCAGCTTACCCAGGTGGGCCCTTGTTCAACCCTCTAGGGTTTGGTAAAGATGAGAAGTCAATGAAGGATTTGAAGCTAAAAGAAGTGAAGAATGGAAGGCTTGCAATG
TTGGCCATATTGGGTTTGTTTATACAAGGACTTGTCACTGGCGTTGGCCCTTACCAAAACCTTTTGAACCATTTGTCTGACCCTATTAACAATAACCTCTTGACAAGCCT
TAAATTTCACTAG
Protein sequenceShow/hide protein sequence
MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGLLQNKAFLTWMEGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGVIGAIAPEILGSL
GLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAM
LAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH