CuGenDBv2

Gene ID	Carg17863
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
Genome location	Carg_Chr10:4531330..4531818
RNA-Seq Expression	Carg17863
Synteny	Carg17863
Gene Ontology terms	NA
InterPro domains	IPR025322 - Protein of unknown function DUF4228, plant

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6590171.1 hypothetical protein SDJN03_15594, partial [Cucurbita argyrosperma subsp. sororia]

2.2e-87

99.38

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Query:  MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG
        MFQFPDMIVCHA+SFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG
Subjt:  MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG

Query:  GAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG
        GAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG
Subjt:  GAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG

KAG7023832.1 hypothetical protein SDJN02_14858, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.7e-88

100

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Query:  MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG
        MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG
Subjt:  MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG

Query:  GAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG
        GAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG
Subjt:  GAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG

XP_022961145.1 uncharacterized protein LOC111461744 [Cucurbita moschata]

5.7e-88

100

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Query:  MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG
        MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG
Subjt:  MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG

Query:  GAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG
        GAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG
Subjt:  GAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG

XP_022988214.1 uncharacterized protein LOC111485518 [Cucurbita maxima]

4.8e-87

98.77

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Query:  MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG
        MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPF+YVRGRNGKALIKVMPEFIVRLVSPG
Subjt:  MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG

Query:  GAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG
        GAYGGEGGGFLCSTPELKKHYDQLVGT KGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG
Subjt:  GAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG

XP_023516713.1 uncharacterized protein LOC111780520 [Cucurbita pepo subsp. pepo]

2.8e-87

99.38

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Query:  MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG
        MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG
Subjt:  MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG

Query:  GAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG
        GAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVG KVKQKEG
Subjt:  GAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LZV5 Uncharacterized protein

3.1e-71

80.12

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Query:  MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG
        MFQFPDM+VCHA+SFFIGH IPSL+I+D+L+AGETYL+LPIDRF+  DVLSTSSLA IGAGN + EKFS  CPFEYVRG NGK LIKVMPEFIVRL+S  
Subjt:  MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG

Query:  GAYGGE----GGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG
           GGE    GGGFLCSTPELKKHYDQLVG++KGQVWSP LETISEYKIRYSPCRFVGFK+KQKEG
Subjt:  GAYGGE----GGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG

A0A1S3BP11 uncharacterized protein LOC103491983

9.5e-73

81.93

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Query:  MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSP-
        MFQFPDM+VCHA+SFFIGH IPSL+I+D+LL GETYLVLPIDRF+  DVLSTSSLA IGAGN +AEKFS  CPFEYVRG NG+ LIKVMPEFIVRL+SP 
Subjt:  MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSP-

Query:  ---GGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG
           GG  GG GGGFLCSTPELKKHYDQLVG++KGQVWSP LETISEYKIRYSPCRFVGFK+KQKEG
Subjt:  ---GGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG

A0A5A7UN34 DUF4228 domain protein

9.5e-73

81.93

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Query:  MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSP-
        MFQFPDM+VCHA+SFFIGH IPSL+I+D+LL GETYLVLPIDRF+  DVLSTSSLA IGAGN +AEKFS  CPFEYVRG NG+ LIKVMPEFIVRL+SP 
Subjt:  MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSP-

Query:  ---GGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG
           GG  GG GGGFLCSTPELKKHYDQLVG++KGQVWSP LETISEYKIRYSPCRFVGFK+KQKEG
Subjt:  ---GGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG

A0A6J1HB88 uncharacterized protein LOC111461744

2.8e-88

100

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Query:  MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG
        MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG
Subjt:  MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG

Query:  GAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG
        GAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG
Subjt:  GAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG

A0A6J1JKY3 uncharacterized protein LOC111485518

2.3e-87

98.77

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Query:  MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG
        MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPF+YVRGRNGKALIKVMPEFIVRLVSPG
Subjt:  MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG

Query:  GAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG
        GAYGGEGGGFLCSTPELKKHYDQLVGT KGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG
Subjt:  GAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G28190.1 unknown protein

3.4e-14

35.26

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Query:  FPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDV--LSTSSLAAIGAGNEAAEKFSSS-CPFEYVRGRNGKAL-IKVMPEFIVRLVSP
        FP   +C +D  +IG + P L+  + L  G  Y +LP D F  ND+  L+ ++L     G    +K      PF   +G  G+ L I+V  EF+  L+  
Subjt:  FPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDV--LSTSSLAAIGAGNEAAEKFSSS-CPFEYVRGRNGKAL-IKVMPEFIVRLVSP

Query:  GGAY-----------GGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYK
        G              GGEG G +C+T +LKK Y QLVG  +   W P LETI+E K
Subjt:  GGAY-----------GGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYK

AT5G12340.1 unknown protein

3.1e-39

49.72

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Query:  MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKF---------SSSCPFEYVRGRNGKALIKVMPE
        MF+FPD IVCHADSF+IG +IP+LA++D L+ G+TY VLPI+RF    +L+TS L+   +  E              SS  PFEY +G NGK LIKV PE
Subjt:  MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKF---------SSSCPFEYVRGRNGKALIKVMPE

Query:  FIVRLVSPG-------GAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKE
        FI+ L+              GE    +C++PELKK YDQLVGT +  +WSP+L+TISE+KIR SP RF G   KQ E
Subjt:  FIVRLVSPG-------GAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKE

Sequences

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CDS sequence

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ATGTTCCAATTTCCCGACATGATAGTCTGCCACGCTGACTCCTTCTTCATCGGCCACCGAATTCCATCCTTAGCCATTGAAGACAAGCTTCTCGCCGGCGAAACCTACTT
GGTTCTCCCCATCGACCGATTCTCCTTGAACGACGTTCTCTCAACGTCGTCGCTCGCTGCTATCGGCGCCGGGAATGAGGCGGCGGAGAAATTCTCTAGTTCGTGTCCGT
TTGAGTACGTCCGAGGGCGGAATGGGAAAGCGCTGATTAAGGTCATGCCGGAGTTTATTGTTCGGTTGGTCTCTCCCGGCGGCGCGTACGGCGGAGAGGGTGGTGGGTTT
TTGTGTAGCACGCCGGAGTTGAAGAAGCATTACGATCAACTCGTCGGAACATCGAAGGGGCAGGTTTGGTCGCCGTCGTTGGAGACTATTTCGGAGTATAAAATTAGGTA
TTCGCCCTGTAGATTTGTTGGGTTTAAAGTCAAACAAAAGGAAGGCTAA

mRNA sequence

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Protein sequence

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MFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGF
LCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG

Carg17863 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome