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Carg17885 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17885
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr10:1232226..1232914
RNA-Seq ExpressionCarg17885
SyntenyCarg17885
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589583.1 Transcription factor BIM1, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1377.19Show/hide
Query:  MGNWWSVVSNAVTPPQRRLSNGVVEQMENNYLQFGRRDNRR--VEKRGSFFRPQASS
        MGNWWSVVSNAVTPPQRRLSNGVVE+MENNYLQFGRRDNR    ++  S FR  +SS
Subjt:  MGNWWSVVSNAVTPPQRRLSNGVVEQMENNYLQFGRRDNRR--VEKRGSFFRPQASS
KAG7023271.1 hypothetical protein SDJN02_14296, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-47100Show/hide
Query:  MGNWWSVVSNAVTPPQRRLSNGVVEQMENNYLQFGRRDNRRVEKRGSFFRPQASSSAALIQESREKQVPNASIRKPRFVVKRLSSFRLGDLQQPESCSR
        MGNWWSVVSNAVTPPQRRLSNGVVEQMENNYLQFGRRDNRRVEKRGSFFRPQASSSAALIQESREKQVPNASIRKPRFVVKRLSSFRLGDLQQPESCSR
Subjt:  MGNWWSVVSNAVTPPQRRLSNGVVEQMENNYLQFGRRDNRRVEKRGSFFRPQASSSAALIQESREKQVPNASIRKPRFVVKRLSSFRLGDLQQPESCSR
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAATTGGTGGAGTGTTGTGAGTAACGCCGTCACCCCGCCGCAACGTCGTCTGTCAAACGGCGTCGTGGAACAAATGGAAAACAACTACCTTCAATTCGGAAGGAG
GGACAATCGCCGCGTGGAGAAAAGAGGGAGTTTCTTCCGACCTCAAGCCTCGTCTTCCGCCGCGCTAATTCAGGAATCGCGCGAAAAGCAAGTACCGAATGCGAGTATAA
GAAAACCTAGGTTTGTCGTGAAGAGACTGAGTTCGTTTCGTCTTGGAGATCTCCAGCAGCCGGAGAGTTGCTCCAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAATTGGTGGAGTGTTGTGAGTAACGCCGTCACCCCGCCGCAACGTCGTCTGTCAAACGGCGTCGTGGAACAAATGGAAAACAACTACCTTCAATTCGGAAGGAG
GGACAATCGCCGCGTGGAGAAAAGAGGGAGTTTCTTCCGACCTCAAGCCTCGTCTTCCGCCGCGCTAATTCAGGAATCGCGCGAAAAGCAAGTACCGAATGCGAGTATAA
GAAAACCTAGGTTTGTCGTGAAGAGACTGAGTTCGTTTCGTCTTGGAGATCTCCAGCAGCCGGAGAGTTGCTCCAGATAA
Protein sequenceShow/hide protein sequence
MGNWWSVVSNAVTPPQRRLSNGVVEQMENNYLQFGRRDNRRVEKRGSFFRPQASSSAALIQESREKQVPNASIRKPRFVVKRLSSFRLGDLQQPESCSR