; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg17886 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17886
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionATP synthase CF1 alpha subunit
Genome locationCarg_Chr10:1225310..1227709
RNA-Seq ExpressionCarg17886
SyntenyCarg17886
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589581.1 hypothetical protein SDJN03_15004, partial [Cucurbita argyrosperma subsp. sororia]2.3e-7075.12Show/hide
Query:  MPSSASAPASPPSASHSQNSATQPSPRKHLADAATNNDGLFDADEKKPDLLDQFEYDPFLFFLSVFDLKFSFAFEVEIGTVSMSQQFQLQFLSLRDLLDG
        MPSSASAPASPPSASHSQNSATQPSPRKHLADAATNNDGLFDADEKKPDLLDQFE                                             
Subjt:  MPSSASAPASPPSASHSQNSATQPSPRKHLADAATNNDGLFDADEKKPDLLDQFEYDPFLFFLSVFDLKFSFAFEVEIGTVSMSQQFQLQFLSLRDLLDG

Query:  FPSDLDFDNFNSIEKYKKYEADYAQRLMAKYFSKKNLYGGNIYEENTTIDDEIIKSSRWPCTRSFADPLQGFEDHRSSCSTSTMEIHGTISNGKNAVKKS
             DFDNFNSIEKYKKYEADYAQRLMAKYFSKKNLYGGNIYEENTTIDDEIIKSSRWPCTRSFADPLQGFEDHRSSCSTSTMEIHGTISNGKNAVKKS
Subjt:  FPSDLDFDNFNSIEKYKKYEADYAQRLMAKYFSKKNLYGGNIYEENTTIDDEIIKSSRWPCTRSFADPLQGFEDHRSSCSTSTMEIHGTISNGKNAVKKS

Query:  G
        G
Subjt:  G

KAG7023270.1 hypothetical protein SDJN02_14295 [Cucurbita argyrosperma subsp. argyrosperma]7.5e-106100Show/hide
Query:  MPSSASAPASPPSASHSQNSATQPSPRKHLADAATNNDGLFDADEKKPDLLDQFEYDPFLFFLSVFDLKFSFAFEVEIGTVSMSQQFQLQFLSLRDLLDG
        MPSSASAPASPPSASHSQNSATQPSPRKHLADAATNNDGLFDADEKKPDLLDQFEYDPFLFFLSVFDLKFSFAFEVEIGTVSMSQQFQLQFLSLRDLLDG
Subjt:  MPSSASAPASPPSASHSQNSATQPSPRKHLADAATNNDGLFDADEKKPDLLDQFEYDPFLFFLSVFDLKFSFAFEVEIGTVSMSQQFQLQFLSLRDLLDG

Query:  FPSDLDFDNFNSIEKYKKYEADYAQRLMAKYFSKKNLYGGNIYEENTTIDDEIIKSSRWPCTRSFADPLQGFEDHRSSCSTSTMEIHGTISNGKNAVKKS
        FPSDLDFDNFNSIEKYKKYEADYAQRLMAKYFSKKNLYGGNIYEENTTIDDEIIKSSRWPCTRSFADPLQGFEDHRSSCSTSTMEIHGTISNGKNAVKKS
Subjt:  FPSDLDFDNFNSIEKYKKYEADYAQRLMAKYFSKKNLYGGNIYEENTTIDDEIIKSSRWPCTRSFADPLQGFEDHRSSCSTSTMEIHGTISNGKNAVKKS

Query:  G
        G
Subjt:  G

KGN63759.1 hypothetical protein Csa_014356 [Cucumis sativus]9.0e-5965.67Show/hide
Query:  MPSSASAPASPPSASHSQNSATQPSPRKHLADAATNNDGLFDADEKKPDLLDQFEYDPFLFFLSVFDLKFSFAFEVEIGTVSMSQQFQLQFLSLRDLLDG
        MPSSASAPASPPSAS SQNSATQPSPRK+LA+AA NNDGLF+A+EKKPDL DQFE                                             
Subjt:  MPSSASAPASPPSASHSQNSATQPSPRKHLADAATNNDGLFDADEKKPDLLDQFEYDPFLFFLSVFDLKFSFAFEVEIGTVSMSQQFQLQFLSLRDLLDG

Query:  FPSDLDFDNFNSIEKYKKYEADYAQRLMAKYFSKKNLYGGNIYEENTTIDDEIIKSSRWPCTRSFADPLQGFEDHRSSCSTSTMEIHGTISNGKNAVKKS
             DFDNF SIEKY+KYEADYAQRLMAKYFSKKNLYGGNI+EENTTID+EIIKSS+WPCTRS ADPLQGFEDHRSSCSTS ME H  ISNGK+AVKK+
Subjt:  FPSDLDFDNFNSIEKYKKYEADYAQRLMAKYFSKKNLYGGNIYEENTTIDDEIIKSSRWPCTRSFADPLQGFEDHRSSCSTSTMEIHGTISNGKNAVKKS

Query:  G
        G
Subjt:  G

XP_008453324.1 PREDICTED: uncharacterized protein LOC103494077 [Cucumis melo]3.5e-5563.68Show/hide
Query:  MPSSASAPASPPSASHSQNSATQPSPRKHLADAATNNDGLFDADEKKPDLLDQFEYDPFLFFLSVFDLKFSFAFEVEIGTVSMSQQFQLQFLSLRDLLDG
        MPSSASAPASP SASHSQNSATQPSPRK+LA+AA +N    DA+EKKPDL DQFE                                             
Subjt:  MPSSASAPASPPSASHSQNSATQPSPRKHLADAATNNDGLFDADEKKPDLLDQFEYDPFLFFLSVFDLKFSFAFEVEIGTVSMSQQFQLQFLSLRDLLDG

Query:  FPSDLDFDNFNSIEKYKKYEADYAQRLMAKYFSKKNLYGGNIYEENTTIDDEIIKSSRWPCTRSFADPLQGFEDHRSSCSTSTMEIHGTISNGKNAVKKS
             DF NFNSIEKY+KYEADYAQRLMAKYFSKKNLYGGNI+EENTT+D+EIIKSS+WPCTRSFADPLQGFEDHRSSCSTS ME H  ISNGK+AVKK+
Subjt:  FPSDLDFDNFNSIEKYKKYEADYAQRLMAKYFSKKNLYGGNIYEENTTIDDEIIKSSRWPCTRSFADPLQGFEDHRSSCSTSTMEIHGTISNGKNAVKKS

Query:  G
        G
Subjt:  G

XP_022134661.1 uncharacterized protein LOC111006878 [Momordica charantia]8.4e-5764.36Show/hide
Query:  MPSSASAPASPPSASHSQNSATQPSPRKHLAD-AATNNDGLFDADEKKPDLLDQFEYDPFLFFLSVFDLKFSFAFEVEIGTVSMSQQFQLQFLSLRDLLD
        MPSSASAPASPPSASHSQNSAT  SP KHLAD AAT+NDGL DA+EKKPDL DQFE                                            
Subjt:  MPSSASAPASPPSASHSQNSATQPSPRKHLAD-AATNNDGLFDADEKKPDLLDQFEYDPFLFFLSVFDLKFSFAFEVEIGTVSMSQQFQLQFLSLRDLLD

Query:  GFPSDLDFDNFNSIEKYKKYEADYAQRLMAKYFSKKNLYGGNIYEENTTIDDEIIKSSRWPCTRSFADPLQGFEDHRSSCSTSTMEIHGTISNGKNAVKK
              DFD+FNS EK+KKYEADYAQRLMAKYFSKKNLYGGNI+EE TTIDDEIIKSS+WPCTRS+ADPL+GFEDHRSSCSTST + H TISNGK+AVKK
Subjt:  GFPSDLDFDNFNSIEKYKKYEADYAQRLMAKYFSKKNLYGGNIYEENTTIDDEIIKSSRWPCTRSFADPLQGFEDHRSSCSTSTMEIHGTISNGKNAVKK

Query:  SG
        +G
Subjt:  SG

TrEMBL top hitse value%identityAlignment
A0A0A0LRW5 Uncharacterized protein4.4e-5965.67Show/hide
Query:  MPSSASAPASPPSASHSQNSATQPSPRKHLADAATNNDGLFDADEKKPDLLDQFEYDPFLFFLSVFDLKFSFAFEVEIGTVSMSQQFQLQFLSLRDLLDG
        MPSSASAPASPPSAS SQNSATQPSPRK+LA+AA NNDGLF+A+EKKPDL DQFE                                             
Subjt:  MPSSASAPASPPSASHSQNSATQPSPRKHLADAATNNDGLFDADEKKPDLLDQFEYDPFLFFLSVFDLKFSFAFEVEIGTVSMSQQFQLQFLSLRDLLDG

Query:  FPSDLDFDNFNSIEKYKKYEADYAQRLMAKYFSKKNLYGGNIYEENTTIDDEIIKSSRWPCTRSFADPLQGFEDHRSSCSTSTMEIHGTISNGKNAVKKS
             DFDNF SIEKY+KYEADYAQRLMAKYFSKKNLYGGNI+EENTTID+EIIKSS+WPCTRS ADPLQGFEDHRSSCSTS ME H  ISNGK+AVKK+
Subjt:  FPSDLDFDNFNSIEKYKKYEADYAQRLMAKYFSKKNLYGGNIYEENTTIDDEIIKSSRWPCTRSFADPLQGFEDHRSSCSTSTMEIHGTISNGKNAVKKS

Query:  G
        G
Subjt:  G

A0A1S3BVY9 uncharacterized protein LOC1034940771.7e-5563.68Show/hide
Query:  MPSSASAPASPPSASHSQNSATQPSPRKHLADAATNNDGLFDADEKKPDLLDQFEYDPFLFFLSVFDLKFSFAFEVEIGTVSMSQQFQLQFLSLRDLLDG
        MPSSASAPASP SASHSQNSATQPSPRK+LA+AA +N    DA+EKKPDL DQFE                                             
Subjt:  MPSSASAPASPPSASHSQNSATQPSPRKHLADAATNNDGLFDADEKKPDLLDQFEYDPFLFFLSVFDLKFSFAFEVEIGTVSMSQQFQLQFLSLRDLLDG

Query:  FPSDLDFDNFNSIEKYKKYEADYAQRLMAKYFSKKNLYGGNIYEENTTIDDEIIKSSRWPCTRSFADPLQGFEDHRSSCSTSTMEIHGTISNGKNAVKKS
             DF NFNSIEKY+KYEADYAQRLMAKYFSKKNLYGGNI+EENTT+D+EIIKSS+WPCTRSFADPLQGFEDHRSSCSTS ME H  ISNGK+AVKK+
Subjt:  FPSDLDFDNFNSIEKYKKYEADYAQRLMAKYFSKKNLYGGNIYEENTTIDDEIIKSSRWPCTRSFADPLQGFEDHRSSCSTSTMEIHGTISNGKNAVKKS

Query:  G
        G
Subjt:  G

A0A2I4G2J5 uncharacterized protein LOC1090041162.6e-3547.06Show/hide
Query:  MPSSASAPASPPSASHSQNSATQPS---PRKHLADAATNNDGLFDADEKKPDLLDQFEYDPFLFFLSVFDLKFSFAFEVEIGTVSMSQQFQLQFLSLRDL
        +PSS+  P+SPPSAS+S+NSAT P+    +K   + ATNN G    DEK+PDL + FEY                                         
Subjt:  MPSSASAPASPPSASHSQNSATQPS---PRKHLADAATNNDGLFDADEKKPDLLDQFEYDPFLFFLSVFDLKFSFAFEVEIGTVSMSQQFQLQFLSLRDL

Query:  LDGFPSDLDFDNFNSIEKYKKYEADYAQRLMAKYFSKKNLYGGNIYEENTTIDDEIIKSSRWPCTRSFADPLQGFEDHRSSCSTSTMEIHGTISNGKNAV
                  D+   IE++KKYEADY  RLMAKYFSKKNLYGGNIY+ + TI+DE+IKSSRWPCTRS+ADP+QGFED RSS S  + E   TISNGK+ +
Subjt:  LDGFPSDLDFDNFNSIEKYKKYEADYAQRLMAKYFSKKNLYGGNIYEENTTIDDEIIKSSRWPCTRSFADPLQGFEDHRSSCSTSTMEIHGTISNGKNAV

Query:  KKSG
        KK+G
Subjt:  KKSG

A0A5D3BGU2 Uncharacterized protein1.7e-5563.68Show/hide
Query:  MPSSASAPASPPSASHSQNSATQPSPRKHLADAATNNDGLFDADEKKPDLLDQFEYDPFLFFLSVFDLKFSFAFEVEIGTVSMSQQFQLQFLSLRDLLDG
        MPSSASAPASP SASHSQNSATQPSPRK+LA+AA +N    DA+EKKPDL DQFE                                             
Subjt:  MPSSASAPASPPSASHSQNSATQPSPRKHLADAATNNDGLFDADEKKPDLLDQFEYDPFLFFLSVFDLKFSFAFEVEIGTVSMSQQFQLQFLSLRDLLDG

Query:  FPSDLDFDNFNSIEKYKKYEADYAQRLMAKYFSKKNLYGGNIYEENTTIDDEIIKSSRWPCTRSFADPLQGFEDHRSSCSTSTMEIHGTISNGKNAVKKS
             DF NFNSIEKY+KYEADYAQRLMAKYFSKKNLYGGNI+EENTT+D+EIIKSS+WPCTRSFADPLQGFEDHRSSCSTS ME H  ISNGK+AVKK+
Subjt:  FPSDLDFDNFNSIEKYKKYEADYAQRLMAKYFSKKNLYGGNIYEENTTIDDEIIKSSRWPCTRSFADPLQGFEDHRSSCSTSTMEIHGTISNGKNAVKKS

Query:  G
        G
Subjt:  G

A0A6J1BYF6 uncharacterized protein LOC1110068784.1e-5764.36Show/hide
Query:  MPSSASAPASPPSASHSQNSATQPSPRKHLAD-AATNNDGLFDADEKKPDLLDQFEYDPFLFFLSVFDLKFSFAFEVEIGTVSMSQQFQLQFLSLRDLLD
        MPSSASAPASPPSASHSQNSAT  SP KHLAD AAT+NDGL DA+EKKPDL DQFE                                            
Subjt:  MPSSASAPASPPSASHSQNSATQPSPRKHLAD-AATNNDGLFDADEKKPDLLDQFEYDPFLFFLSVFDLKFSFAFEVEIGTVSMSQQFQLQFLSLRDLLD

Query:  GFPSDLDFDNFNSIEKYKKYEADYAQRLMAKYFSKKNLYGGNIYEENTTIDDEIIKSSRWPCTRSFADPLQGFEDHRSSCSTSTMEIHGTISNGKNAVKK
              DFD+FNS EK+KKYEADYAQRLMAKYFSKKNLYGGNI+EE TTIDDEIIKSS+WPCTRS+ADPL+GFEDHRSSCSTST + H TISNGK+AVKK
Subjt:  GFPSDLDFDNFNSIEKYKKYEADYAQRLMAKYFSKKNLYGGNIYEENTTIDDEIIKSSRWPCTRSFADPLQGFEDHRSSCSTSTMEIHGTISNGKNAVKK

Query:  SG
        +G
Subjt:  SG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGTCGTCTGCATCAGCTCCGGCCTCTCCTCCGTCGGCGTCTCATTCGCAGAATTCTGCTACCCAACCTTCCCCGCGCAAACACTTGGCCGATGCTGCAACCAATAA
TGACGGACTTTTTGATGCGGACGAGAAGAAACCCGATTTATTGGATCAATTTGAGTATGACCCTTTCTTATTCTTCCTGTCTGTGTTTGATTTGAAGTTTTCCTTTGCTT
TTGAAGTCGAAATCGGTACTGTTTCAATGTCTCAACAGTTTCAACTGCAGTTCCTTTCACTTCGCGATCTTTTGGATGGTTTTCCCTCCGATTTAGATTTTGATAATTTC
AACTCCATTGAGAAGTACAAGAAGTATGAAGCTGACTACGCTCAACGCCTAATGGCCAAATACTTTTCAAAGAAAAACCTCTATGGAGGAAACATCTATGAAGAGAACAC
AACCATTGATGACGAGATTATAAAGTCGAGCAGGTGGCCTTGTACACGCTCATTTGCAGACCCTTTGCAGGGTTTTGAAGATCACAGAAGCAGCTGTTCAACATCCACCA
TGGAAATCCACGGTACCATCTCAAATGGGAAGAATGCTGTGAAGAAGAGTGGATGA
mRNA sequenceShow/hide mRNA sequence
AGCACTGTTATTATATTAATTCGTTTCCCGTTCTCATTCCCACGTGAAGTTTCGTTCGCCGTTCAGAAAATTTAGAAGATAGAACAGTGATTTGAAGAGCGGCATGCCGT
CGTCTGCATCAGCTCCGGCCTCTCCTCCGTCGGCGTCTCATTCGCAGAATTCTGCTACCCAACCTTCCCCGCGCAAACACTTGGCCGATGCTGCAACCAATAATGACGGA
CTTTTTGATGCGGACGAGAAGAAACCCGATTTATTGGATCAATTTGAGTATGACCCTTTCTTATTCTTCCTGTCTGTGTTTGATTTGAAGTTTTCCTTTGCTTTTGAAGT
CGAAATCGGTACTGTTTCAATGTCTCAACAGTTTCAACTGCAGTTCCTTTCACTTCGCGATCTTTTGGATGGTTTTCCCTCCGATTTAGATTTTGATAATTTCAACTCCA
TTGAGAAGTACAAGAAGTATGAAGCTGACTACGCTCAACGCCTAATGGCCAAATACTTTTCAAAGAAAAACCTCTATGGAGGAAACATCTATGAAGAGAACACAACCATT
GATGACGAGATTATAAAGTCGAGCAGGTGGCCTTGTACACGCTCATTTGCAGACCCTTTGCAGGGTTTTGAAGATCACAGAAGCAGCTGTTCAACATCCACCATGGAAAT
CCACGGTACCATCTCAAATGGGAAGAATGCTGTGAAGAAGAGTGGATGATATACTTAGGATTGAAGAAGATGAAGCTCAGTATAGATGATTCTTGGTAACGCATTTTAAT
TATTTTAAACGCTTTTTAACTATTGACAAATATTCGCATTTAAATTATTTTCAT
Protein sequenceShow/hide protein sequence
MPSSASAPASPPSASHSQNSATQPSPRKHLADAATNNDGLFDADEKKPDLLDQFEYDPFLFFLSVFDLKFSFAFEVEIGTVSMSQQFQLQFLSLRDLLDGFPSDLDFDNF
NSIEKYKKYEADYAQRLMAKYFSKKNLYGGNIYEENTTIDDEIIKSSRWPCTRSFADPLQGFEDHRSSCSTSTMEIHGTISNGKNAVKKSG