; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg17904 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17904
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTranscription initiation factor IIE subunit alpha
Genome locationCarg_Chr10:1139571..1144130
RNA-Seq ExpressionCarg17904
SyntenyCarg17904
Gene Ontology termsGO:0001113 - transcriptional open complex formation at RNA polymerase II promoter (biological process)
GO:0005673 - transcription factor TFIIE complex (cellular component)
InterPro domainsIPR002853 - Transcription initiation factor IIE subunit alpha, N-terminal
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017919 - Transcription factor TFE/TFIIEalpha HTH domain
IPR024550 - TFIIEalpha/SarR/Rpc3 HTH domain
IPR036390 - Winged helix DNA-binding domain superfamily
IPR039997 - Transcription factor E


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022134956.1 general transcription factor IIE subunit 1 [Momordica charantia]2.6e-25094.98Show/hide
Query:  MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA
        MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKL+TRDHRRETAKGAKIFSAA
Subjt:  MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA

Query:  IAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD
        +AATADGQ PGKEGDEKIKMHTHSYCSLDYAQ+YDVVRYR+HRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD
Subjt:  IAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD

Query:  KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE
        KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE
Subjt:  KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE

Query:  VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKA
        VAFSGAEGKGV+VKSE+ENT LKVLPPWMIK+GMNLTKEQRGEVK +SKMDAGSA AQFSDDKKSSANDDDKTN QDEYVKAYYAAILKKQQELEE+AK 
Subjt:  VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKA

Query:  QKELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEEG
         +ELSSTEVTE++S  NSSRQVGMKAKRE DEE+DDIEWEEAPI GNANENYKVGDLNVEASASVEDEEEDDVDWEEG
Subjt:  QKELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEEG

XP_022922068.1 general transcription factor IIE subunit 1-like [Cucurbita moschata]7.2e-264100Show/hide
Query:  MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA
        MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA
Subjt:  MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA

Query:  IAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD
        IAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD
Subjt:  IAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD

Query:  KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE
        KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE
Subjt:  KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE

Query:  VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKA
        VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKA
Subjt:  VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKA

Query:  QKELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEEG
        QKELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEEG
Subjt:  QKELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEEG

XP_022987307.1 general transcription factor IIE subunit 1-like [Cucurbita maxima]9.7e-26198.33Show/hide
Query:  MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA
        MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA
Subjt:  MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA

Query:  IAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD
        +AATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD
Subjt:  IAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD

Query:  KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE
        KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE
Subjt:  KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE

Query:  VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKA
        VAFSGAE KGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKG+SKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAK 
Subjt:  VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKA

Query:  QKELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEEG
        QKELS TE+T+NLSYTN+SRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEEG
Subjt:  QKELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEEG

XP_023515738.1 general transcription factor IIE subunit 1-like [Cucurbita pepo subsp. pepo]5.7e-26198.54Show/hide
Query:  MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA
        MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA
Subjt:  MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA

Query:  IAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD
        IAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD
Subjt:  IAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD

Query:  KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE
        KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE
Subjt:  KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE

Query:  VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKA
        VAFSGAEGKGVNVKSESENT LKVLPPWMIKEGMNLTKEQRGEVKG++KMDAGSAS QFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAK 
Subjt:  VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKA

Query:  QKELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEEG
        QKELSSTEVTENLSYTNSSRQVGMKAKREED+EEDDIEWEEAPI+GNANENYKVGDLNVEASASVEDEEEDDVDWEEG
Subjt:  QKELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEEG

XP_038880289.1 general transcription factor IIE subunit 1 isoform X1 [Benincasa hispida]5.9e-25095.4Show/hide
Query:  MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA
        MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKL+TRDHRRETAKGAKIFSAA
Subjt:  MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA

Query:  IAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD
        +AATADGQHP KEGDEKIKMHTHSYCSLDYAQ+YDVVRYR+HRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS EDEYFHCENCNGELVAESD
Subjt:  IAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD

Query:  KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE
        KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKS+QGLGYGGTPMPFVGETKVE
Subjt:  KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE

Query:  VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKA
        VAFSGAEGKGV+VKSESENT LKVLPPWMIK+GMNLTKEQRGEVK +SKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAK 
Subjt:  VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKA

Query:  QKELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEEG
        Q+EL STEVTEN++  NSSRQVGMKAKREED EEDDIEWEEAPI GNANENYKV DLNVEASASVEDEEEDDVDWEEG
Subjt:  QKELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEEG

TrEMBL top hitse value%identityAlignment
A0A5A7UX12 Transcription initiation factor IIE subunit alpha1.5e-24392.68Show/hide
Query:  MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA
        MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKL+TRDHRRETAKGAKIFSAA
Subjt:  MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA

Query:  IAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD
        +AATADGQH  KEGDEKIKMHTHSYCSLDYAQ+YDVVRYR+HRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS EDEYFHCENCNGELVAESD
Subjt:  IAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD

Query:  KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE
        KLAA QGGDGDDNARKRRHEKLKDMLQKME QLKPL+EQL+RVKDLPVPEFGTLLAWEARASAAARG NGDLNGNDPSKSSQ  GYGGTPMPFVGETKVE
Subjt:  KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE

Query:  VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKA
        VAFSGAEGKGV+VKSES+NT LKVLPPWMIK+GMNLTKEQRGEVK +SK DAGSASAQFSDDKKS ANDDDKTNIQDEYVKAYYAAILKKQQELEEAAK 
Subjt:  VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKA

Query:  QKELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEEG
        Q+ELSSTEVTE+++ TNSSR+VGMKAKREED+++DDIEWEEAPI GNANENYKV DLNVEASA VEDEEEDDVDWEEG
Subjt:  QKELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEEG

A0A5D3DYI4 Transcription initiation factor IIE subunit alpha1.2e-24392.68Show/hide
Query:  MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA
        MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKL+TRDHRRETAKGAKIFSAA
Subjt:  MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA

Query:  IAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD
        +AATADGQH  KEGDEKIKMHTHSYCSLDYAQ+YDVVRYR+HRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS EDEYFHCENCNGELVAESD
Subjt:  IAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD

Query:  KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE
        KLAA QGGDGDDNARKRRHEKLKDMLQKME QLKPL+EQL+RVKDLPVPEFGTLLAWEARASAAARG NGDLNGNDPSKSSQ  GYGGTPMPFVGETKVE
Subjt:  KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE

Query:  VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKA
        VAFSGA+GKGV+VKSES+NT LKVLPPWMIK+GMNLTKEQRGEVK +SK DAGSASAQFSDDKKS ANDDDKTNIQDEYVKAYYAAILKKQQELEEAAK 
Subjt:  VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKA

Query:  QKELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEEG
        Q+ELSSTEVTE+++ TNSSRQVGMKAKREED+++DDIEWEEAPI GNANENYKV DLNVEASA VEDEEEDDVDWEEG
Subjt:  QKELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEEG

A0A6J1BZ86 Transcription initiation factor IIE subunit alpha1.3e-25094.98Show/hide
Query:  MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA
        MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKL+TRDHRRETAKGAKIFSAA
Subjt:  MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA

Query:  IAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD
        +AATADGQ PGKEGDEKIKMHTHSYCSLDYAQ+YDVVRYR+HRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD
Subjt:  IAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD

Query:  KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE
        KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE
Subjt:  KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE

Query:  VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKA
        VAFSGAEGKGV+VKSE+ENT LKVLPPWMIK+GMNLTKEQRGEVK +SKMDAGSA AQFSDDKKSSANDDDKTN QDEYVKAYYAAILKKQQELEE+AK 
Subjt:  VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKA

Query:  QKELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEEG
         +ELSSTEVTE++S  NSSRQVGMKAKRE DEE+DDIEWEEAPI GNANENYKVGDLNVEASASVEDEEEDDVDWEEG
Subjt:  QKELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEEG

A0A6J1E5J2 Transcription initiation factor IIE subunit alpha3.5e-264100Show/hide
Query:  MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA
        MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA
Subjt:  MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA

Query:  IAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD
        IAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD
Subjt:  IAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD

Query:  KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE
        KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE
Subjt:  KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE

Query:  VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKA
        VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKA
Subjt:  VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKA

Query:  QKELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEEG
        QKELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEEG
Subjt:  QKELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEEG

A0A6J1JA07 Transcription initiation factor IIE subunit alpha4.7e-26198.33Show/hide
Query:  MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA
        MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA
Subjt:  MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA

Query:  IAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD
        +AATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD
Subjt:  IAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESD

Query:  KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE
        KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE
Subjt:  KLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE

Query:  VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKA
        VAFSGAE KGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKG+SKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAK 
Subjt:  VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKA

Query:  QKELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEEG
        QKELS TE+T+NLSYTN+SRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEEG
Subjt:  QKELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEEG

SwissProt top hitse value%identityAlignment
P29083 General transcription factor IIE subunit 14.4e-0622.95Show/hide
Query:  VVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRL
        + LD L R   V+EED+ + LK   KQLR  L  L+ +K +    R ETA             ADG           K   H+Y  ++Y  + +VV+Y+L
Subjt:  VVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRL

Query:  HRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLS
          M+++++ +  D      + CP CS  +T L+A +L       F C  C+ E+             + D++A  ++    + +L +   Q++P+   L 
Subjt:  HRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLS

Query:  RVKDLPV------PEFGTLLAW-EARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVEVAFSGAEGKGVNVKSESENTALKVLPPWMIKEGM
          +D+ +      PE   + A  +++  AA       L G    ++        T  P   +   +      + +    ++  E  + K  P W+ +  +
Subjt:  RVKDLPV------PEFGTLLAW-EARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVEVAFSGAEGKGVNVKSESENTALKVLPPWMIKEGM

Query:  NLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSSTEVTENLSYTNSS------RQVGMKA-K
                  +G   MDA      F + ++  A  DD     +E ++A      K    +  +  A   +++   +++ S T+ S      R   +   K
Subjt:  NLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSSTEVTENLSYTNSS------RQVGMKA-K

Query:  REEDEEEDDIEWEE
        REEDEEEDD E+EE
Subjt:  REEDEEEDDIEWEE

P36100 Transcription initiation factor IIE subunit alpha2.1e-0821.75Show/hide
Query:  GIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVV
        G  V+VLDA+     + E+DL + L ++  +L   +  L  ++L++   +RE                    P  +  E++      Y  + Y    D +
Subjt:  GIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVV

Query:  RYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLM
        ++++H++ ++LKD+L+  +    Y+CP C  +YT L+A++L++ +   F C  C+  LV              +D++ K+  EK +D L ++  Q++P++
Subjt:  RYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLM

Query:  EQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVEVAFSGAEGKG------VNVKSESENTALKVLPPWMIK
        + L ++ D  + E  T     AR       ++     N    S+        P+P +  T +    S   G        +N+ + S+  A + L     +
Subjt:  EQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVEVAFSGAEGKG------VNVKSESENTALKVLPPWMIK

Query:  E--GMNLTKE-QRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSSTEVTENLSYTNSSRQVGMKAKR
        E    N   E  +    G + +       +F     +SA D    + +     +Y       +QE+EE     +E   T      +      ++  + + 
Subjt:  E--GMNLTKE-QRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSSTEVTENLSYTNSSRQVGMKAKR

Query:  EEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVD
        EE+EEED+ E EE  +E   ++N +    N     ++EDE ED  D
Subjt:  EEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVD

Q557M8 General transcription factor IIE subunit 12.5e-1725.06Show/hide
Query:  LVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQ
        LVK+  RAFY D                   AV++   L  ++ +++EDLA  L++  K +R+ L  L+ + +V     +  AKG               
Subjt:  LVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQ

Query:  HPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESDKLAAAQGG
         P + G       TH    +DY  + D+V+Y+L+  +KK++     K  VQ Y C  C + YTALD  +L++++     CE C+GEL  E +  +  Q  
Subjt:  HPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESDKLAAAQGG

Query:  DGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGND-----PSKSSQGLGYGGTPMPFVGETKVEVAF
                 +H+   D+      QL+ ++EQL + +   +P F   LA      +A +G +  +N N      P  S+  +  G      +  T   + F
Subjt:  DGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGND-----PSKSSQGLGYGGTPMPFVGETKVEVAF

Query:  -------SGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQD---EYVKAYY
                G E     VK E++ T L  LPPW++    N  K +   VK +S ++    +   ++++ ++  +  K + QD    Y+K +Y
Subjt:  -------SGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQD---EYVKAYY

Q5R8H5 General transcription factor IIE subunit 14.4e-0622.95Show/hide
Query:  VVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRL
        + LD L R   V+EED+ + LK   KQLR  L  L+ +K +    R ETA             ADG           K   H+Y  ++Y  + +VV+Y+L
Subjt:  VVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRL

Query:  HRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLS
          M+++++ +  D      + CP CS  +T L+A +L       F C  C+ E+             + D++A  ++    + +L +   Q++P+   L 
Subjt:  HRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLS

Query:  RVKDLPV------PEFGTLLAW-EARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVEVAFSGAEGKGVNVKSESENTALKVLPPWMIKEGM
          +D+ +      PE   + A  +++  AA       L G    ++        T  P   +   +      +      ++  E  + K  P W+ +  +
Subjt:  RVKDLPV------PEFGTLLAW-EARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVEVAFSGAEGKGVNVKSESENTALKVLPPWMIKEGM

Query:  NLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSSTEVTENLSYTNSS------RQVGMKA-K
                  +G   MDA      F + ++  A  DD     +E ++A      K    +  +  A   +++   +++ S T+ S      R   +   K
Subjt:  NLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSSTEVTENLSYTNSS------RQVGMKA-K

Query:  REEDEEEDDIEWEE
        REEDEEEDD E+EE
Subjt:  REEDEEEDDIEWEE

Q9P3W1 Transcription initiation factor IIE subunit alpha3.4e-0622.22Show/hide
Query:  EPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAA
        E   RL+K+  RAFY+                     ++ +DA+ R   + +E  A  + +  K+ R     L E++L+    R E              
Subjt:  EPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAA

Query:  TADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESDKLA
                KEG ++ + HT +Y  +D+    D +++R+H++ K ++D + +    + Y+CP C++++++LD L L++ E   F C  C  EL        
Subjt:  TADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESDKLA

Query:  AAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVEVAF
             D +++A     +K    L K+  Q+  +++ L RV ++ VP+     A E     +    N  L+  + SKS+  +              + V F
Subjt:  AAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVEVAF

Query:  SG---AEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSAND--DDKTNIQDE--YVKAYYAAILKKQQELEE
        S     + K      +    A  +LP W      + T    G +       AG+  A     +  + N+  D KT+I  E   + AYYA +  KQ+E  E
Subjt:  SG---AEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSAND--DDKTNIQDE--YVKAYYAAILKKQQELEE

Query:  AAKA-----QKELSSTEVTENLSYTNSSRQVG-MKAKREEDEEEDDIEWEEA-PIEGN-------ANENYKVGDLNVEASA---------SVEDEEEDDV
           +     +++    +VT   S  N S   G +K K E    + DI+ +    IE N       +      GD  ++ S            ++++ED+ 
Subjt:  AAKA-----QKELSSTEVTENLSYTNSSRQVG-MKAKREEDEEEDDIEWEEA-PIEGN-------ANENYKVGDLNVEASA---------SVEDEEEDDV

Query:  DWEE
        D+E+
Subjt:  DWEE

Arabidopsis top hitse value%identityAlignment
AT1G03280.1 Transcription factor TFIIE, alpha subunit2.9e-16265.08Show/hide
Query:  IEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIA
        ++PF +LV+L ARAFYDD TTK DNQ K+ RSDNRGIA VVLDAL RRQWVREEDLAK+L+LH+KQLR+ +R  EEEKL+ RDHR+ETAKGAK++SAA+A
Subjt:  IEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIA

Query:  ATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESDKL
        AT DG+      ++K+K+HTHSYC LDYAQ+ DVVR+RLHRMKK+LKDELEDKNTVQEY CPNC R+Y ALDALRLIS+ D+ FHCENCNGELV E +KL
Subjt:  ATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESDKL

Query:  AAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVEVA
         + +  DGDDNAR+RR E LK+MLQK+EVQ+KPLM+QL+RVKDLP+PEFG+ LAWEARA+ AAR  NGDLN NDP + SQG GYG TPMPF+GETKVEV 
Subjt:  AAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVEVA

Query:  FSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGS-ASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQ
                 +VKS+  +++LKVLPPWMIKEGMNLT+EQRGE++ ++K+D G+ A+A+ SDDKKS+  + D+ +++DEY+KAYYA ++K+Q   E AA+  
Subjt:  FSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGS-ASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQ

Query:  KELSSTEVTENL--SYTNSSRQVGMKAKREEDEEED--DIEWEE-APIEGNANENYKVGDLNVEASAS--VEDEEEDDVDWEEG
        ++ S+ E T  +      S RQV MKAKREEDE+ED  ++EWEE AP+   AN NYKV DLNVEA AS   E+EEEDDVDWEEG
Subjt:  KELSSTEVTENL--SYTNSSRQVGMKAKREEDEEED--DIEWEE-APIEGNANENYKVGDLNVEASAS--VEDEEEDDVDWEEG

AT4G20340.1 Transcription factor TFIIE, alpha subunit1.1e-13256.25Show/hide
Query:  IEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIA
        +EPF +LV+L  R FYD+ T + DNQ K+ + + +G AV+VLDALTRRQWVREEDLAK +K ++K+LR+ +R  EE+K V R HR+ETAK AK++S A+ 
Subjt:  IEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIA

Query:  ATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESDKL
         T DG+      ++ +K HTHSYC LDYAQ+YD+VRY+LHR+KKK KDELED+NTVQEY CPNC R+Y ALDALRLIS+ED+ FHCENCNGELV E +KL
Subjt:  ATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESDKL

Query:  AAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVEVA
         + +  D  DNAR+R+ EK+K  LQ +E +LKPLME ++RVKDLP P F    AWEARA+ AAR  NGD N +DPS+S    GYG TPMPF+GETKVEV 
Subjt:  AAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVEVA

Query:  FSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKS-SANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQ
            EG   +V S   +++LK+LPPWMIK+GM LT+EQRGE++ ++ +D    +A+ SDDKKS   N DD  +++DEY+KAYYAAI+++Q+   +  + +
Subjt:  FSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKS-SANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQ

Query:  KELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDE---EEDDVDWEEG
            ST      + T S RQVGMK+KRE  EEE+D+EWEE      AN NYKV DLNVEA  + E E   E+DD+DWEEG
Subjt:  KELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDE---EEDDVDWEEG

AT4G20810.1 transcription initiation factor IIE (TFIIE) alpha subunit family protein / general transcription factor TFIIE family protein1.4e-10850Show/hide
Query:  LVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQ
        +VKL A+ FYD+ T K +NQ K+ ++ + GIAV+VLDALTRRQWVREEDLAK LKL++KQLR  LR+ EE++ + R HR+E +          +AT +G+
Subjt:  LVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQ

Query:  HPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESDKLAAAQ-G
             G++K+K+H +SYC LDY+Q+YDV+RY+LHRMKK+ KD LEDK+ VQEY CPNC R+               +FHCENCNGELV E +KL + +  
Subjt:  HPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESDKLAAAQ-G

Query:  GDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVEVAFSGAE
         DG DN R RR + LKD+LQ MEV+LKPLM+ ++R+KDLPVP F +  AWE R + AAR  NGDLN +D  +  QG GYG TPMPF+GET++EV   G E
Subjt:  GDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVEVAFSGAE

Query:  GKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSST
         + V      +++  K+ P W+IK+GMNL+ EQRGE++ ++K D G +S +         N DD  N++DEY+KAYYAAIL ++QEL E    Q+     
Subjt:  GKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSST

Query:  EVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEE
             L+ ++S RQVGMK+KREE+EE      EEA +   AN NYKV DLNVEA  +  +++E+DVDW+E
Subjt:  EVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATCGAACCTTTTAACAGGTTGGTGAAGCTAGCTGCAAGAGCTTTCTACGATGACATTACGACTAAAGGAGATAATCAGCCCAAGACCGGTCGGAGTGATAATAG
GGGAATCGCGGTTGTCGTGCTTGATGCTCTCACGAGACGACAATGGGTTCGAGAAGAAGATTTGGCAAAGAACTTAAAACTACATTCGAAGCAATTACGTCGAACTCTAA
GGTTTTTAGAAGAGGAAAAATTGGTTACCCGAGATCATAGAAGGGAGACAGCTAAGGGAGCAAAGATATTTAGCGCTGCAATTGCTGCCACAGCCGATGGCCAACACCCG
GGGAAGGAGGGGGATGAAAAGATTAAGATGCACACACATTCTTATTGCTCGCTAGACTATGCACAGGTCTATGATGTGGTTAGATACAGACTGCACCGCATGAAGAAAAA
ACTGAAAGATGAACTGGAGGACAAGAACACAGTTCAAGAGTATATATGCCCCAACTGTTCGAGAAGGTACACTGCTTTGGATGCTCTTCGATTAATCTCTCTTGAGGATG
AATACTTCCATTGTGAAAATTGCAATGGCGAGCTGGTTGCTGAGAGTGACAAACTGGCTGCTGCCCAAGGAGGGGATGGAGATGATAATGCCAGGAAGCGCCGGCATGAA
AAATTGAAGGACATGCTTCAGAAGATGGAGGTTCAGCTTAAACCTTTAATGGAACAACTCAGCAGAGTCAAAGATTTGCCAGTTCCAGAGTTTGGAACTCTTTTAGCATG
GGAAGCTCGTGCAAGTGCAGCTGCACGTGGAGCAAATGGTGATCTCAATGGCAATGATCCCTCAAAATCATCACAAGGTTTAGGATATGGGGGAACGCCTATGCCTTTTG
TTGGCGAGACCAAGGTTGAAGTTGCCTTTTCTGGGGCTGAGGGCAAGGGAGTGAATGTTAAATCTGAATCTGAGAACACTGCTCTGAAAGTGTTACCTCCTTGGATGATC
AAAGAAGGGATGAACCTCACAAAGGAACAACGCGGGGAGGTCAAAGGGGACTCAAAGATGGATGCTGGTTCAGCTTCTGCTCAGTTTTCTGATGATAAAAAGTCATCGGC
CAATGATGATGATAAAACGAATATACAGGATGAGTATGTTAAAGCTTATTATGCTGCCATACTGAAGAAGCAACAAGAGCTTGAAGAAGCTGCTAAGGCACAAAAGGAAT
TATCCAGTACAGAGGTTACTGAAAACTTGTCTTACACAAATTCCAGTCGCCAGGTAGGAATGAAGGCAAAACGTGAAGAGGATGAAGAAGAAGATGATATTGAATGGGAG
GAGGCTCCAATAGAGGGTAACGCAAATGAAAATTACAAGGTTGGTGACTTGAATGTTGAAGCATCAGCTTCGGTAGAAGATGAAGAAGAAGATGATGTGGATTGGGAGGA
AGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATTTTTTCTTTTCCTTTTCTCCCACGATTCTCAGATCGCTCTCTGCGAAGTCCTGCTCGAGTCGAATACTGAAAAAAATCAGCTCACATGTAATAGCTACACCAGCACTT
GAGCAATTGAATCCCAAGTTAATTCATCATCATCATGAGTATCGAACCTTTTAACAGGTTGGTGAAGCTAGCTGCAAGAGCTTTCTACGATGACATTACGACTAAAGGAG
ATAATCAGCCCAAGACCGGTCGGAGTGATAATAGGGGAATCGCGGTTGTCGTGCTTGATGCTCTCACGAGACGACAATGGGTTCGAGAAGAAGATTTGGCAAAGAACTTA
AAACTACATTCGAAGCAATTACGTCGAACTCTAAGGTTTTTAGAAGAGGAAAAATTGGTTACCCGAGATCATAGAAGGGAGACAGCTAAGGGAGCAAAGATATTTAGCGC
TGCAATTGCTGCCACAGCCGATGGCCAACACCCGGGGAAGGAGGGGGATGAAAAGATTAAGATGCACACACATTCTTATTGCTCGCTAGACTATGCACAGGTCTATGATG
TGGTTAGATACAGACTGCACCGCATGAAGAAAAAACTGAAAGATGAACTGGAGGACAAGAACACAGTTCAAGAGTATATATGCCCCAACTGTTCGAGAAGGTACACTGCT
TTGGATGCTCTTCGATTAATCTCTCTTGAGGATGAATACTTCCATTGTGAAAATTGCAATGGCGAGCTGGTTGCTGAGAGTGACAAACTGGCTGCTGCCCAAGGAGGGGA
TGGAGATGATAATGCCAGGAAGCGCCGGCATGAAAAATTGAAGGACATGCTTCAGAAGATGGAGGTTCAGCTTAAACCTTTAATGGAACAACTCAGCAGAGTCAAAGATT
TGCCAGTTCCAGAGTTTGGAACTCTTTTAGCATGGGAAGCTCGTGCAAGTGCAGCTGCACGTGGAGCAAATGGTGATCTCAATGGCAATGATCCCTCAAAATCATCACAA
GGTTTAGGATATGGGGGAACGCCTATGCCTTTTGTTGGCGAGACCAAGGTTGAAGTTGCCTTTTCTGGGGCTGAGGGCAAGGGAGTGAATGTTAAATCTGAATCTGAGAA
CACTGCTCTGAAAGTGTTACCTCCTTGGATGATCAAAGAAGGGATGAACCTCACAAAGGAACAACGCGGGGAGGTCAAAGGGGACTCAAAGATGGATGCTGGTTCAGCTT
CTGCTCAGTTTTCTGATGATAAAAAGTCATCGGCCAATGATGATGATAAAACGAATATACAGGATGAGTATGTTAAAGCTTATTATGCTGCCATACTGAAGAAGCAACAA
GAGCTTGAAGAAGCTGCTAAGGCACAAAAGGAATTATCCAGTACAGAGGTTACTGAAAACTTGTCTTACACAAATTCCAGTCGCCAGGTAGGAATGAAGGCAAAACGTGA
AGAGGATGAAGAAGAAGATGATATTGAATGGGAGGAGGCTCCAATAGAGGGTAACGCAAATGAAAATTACAAGGTTGGTGACTTGAATGTTGAAGCATCAGCTTCGGTAG
AAGATGAAGAAGAAGATGATGTGGATTGGGAGGAAGGTTGAAGAGGCAAACAGAATTTTATACCCCAGTATATGATACAAGGTGATATTGCCTTTCTTCCATCTGGAAGG
CCTTAGTGAATTACGGTAGGAGCTCTGTAGTTAATCTTGTGCAGTCGTGTTACTTGTTATATTAGAGCCGATTTTAATGATCCCTAACCTATACTTGCTTGATTTACTGC
TGATATTTCATCTTGGGGGCTCTGATGAATTGAATTGTTCTTTACCAGTTTGGTGTGTGGGAAGAAAAGATGAAGGAAAATAGATGTTTAATTGATTCAAGGAATGTAAA
TCCATTAGTTACCAATTACAGTGGGACGACACTTGTGCAAACTTACGGTGTATTTTACGATAACTTTTACTTGTTTAGCCAATACAGAAGTTTAGAAATAAAGACAGCGA
TTTCCAGACATTTTCACCTTTCTCACCCTGTAGGAACAACAGAGCATATCAGGTACGATATCTTTTTGAATATTTCATAATGCATGTGCTTGTTTGTATGTTTATATTCT
CATATCGTCAGATGAGTGAGTTAGTATAGTTTTTTCGTGTTGTTTTTGGTAGAATGCAGCATTTAGAAGTTAATAATCCTGCATAAAACTGTCCTCTTCTCAAAGGTTTG
TCTTATATCCTCTTAATATGTTGCCCTGATC
Protein sequenceShow/hide protein sequence
MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHP
GKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHE
KLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVEVAFSGAEGKGVNVKSESENTALKVLPPWMI
KEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWE
EAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEEG