; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg17912 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17912
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionATP-dependent helicase/nuclease subunit A isoform 1
Genome locationCarg_Chr10:1100305..1102215
RNA-Seq ExpressionCarg17912
SyntenyCarg17912
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023244.1 hypothetical protein SDJN02_14269, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-35100Show/hide
Query:  TLPKDLNLRRKGSCEIWKMMGSSRSWAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
        TLPKDLNLRRKGSCEIWKMMGSSRSWAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
Subjt:  TLPKDLNLRRKGSCEIWKMMGSSRSWAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
XP_008453375.1 PREDICTED: uncharacterized protein LOC103494113 [Cucumis melo]1.3e-2481.82Show/hide
Query:  KDLNLRRKGSCEIWKMMGSSRSWAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDS
        K  + +R  SCE  KM+GSSR WAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERL+QYE ELKKKE+MKELEDS
Subjt:  KDLNLRRKGSCEIWKMMGSSRSWAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDS
XP_022922063.1 uncharacterized protein LOC111430128 [Cucurbita moschata]4.2e-2398.41Show/hide
Query:  MMGSSRSWAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
        MMGSSRSWAY RIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
Subjt:  MMGSSRSWAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
XP_022987318.1 uncharacterized protein LOC111484905 [Cucurbita maxima]4.0e-3496.3Show/hide
Query:  TLPKDLNLRRKGSCEIWKMMGSSRSWAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
        TLPKDLNLRR+GSCEIWKMMGSSR+WAY RIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
Subjt:  TLPKDLNLRRKGSCEIWKMMGSSRSWAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
XP_023516642.1 uncharacterized protein LOC111780454 [Cucurbita pepo subsp. pepo]9.3e-2396.83Show/hide
Query:  MMGSSRSWAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
        MMGSSR+WAY RIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
Subjt:  MMGSSRSWAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
TrEMBL top hitse value%identityAlignment
A0A1S3BW37 uncharacterized protein LOC1034941136.3e-2581.82Show/hide
Query:  KDLNLRRKGSCEIWKMMGSSRSWAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDS
        K  + +R  SCE  KM+GSSR WAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERL+QYE ELKKKE+MKELEDS
Subjt:  KDLNLRRKGSCEIWKMMGSSRSWAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDS
A0A5A7USD3 ATP-dependent helicase/nuclease subunit A isoform 14.2e-2191.94Show/hide
Query:  MMGSSRSWAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDS
        M+GSSR WAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERL+QYE ELKKKE+MKELEDS
Subjt:  MMGSSRSWAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDS
A0A6J1BYI4 uncharacterized protein LOC1110068982.3e-1987.1Show/hide
Query:  MMGSSRSWAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDS
        M+G+ R WAY RII GTIVGGVLGFYVMHRVEVGYKEK+KERLRQYE ELKKKEQMKELEDS
Subjt:  MMGSSRSWAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDS
A0A6J1E2A1 uncharacterized protein LOC1114301282.0e-2398.41Show/hide
Query:  MMGSSRSWAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
        MMGSSRSWAY RIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
Subjt:  MMGSSRSWAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
A0A6J1JJ44 uncharacterized protein LOC1114849052.0e-3496.3Show/hide
Query:  TLPKDLNLRRKGSCEIWKMMGSSRSWAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
        TLPKDLNLRR+GSCEIWKMMGSSR+WAY RIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
Subjt:  TLPKDLNLRRKGSCEIWKMMGSSRSWAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G18510.1 unknown protein2.1e-1257.14Show/hide
Query:  SSRSWAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKEL
        SS +W Y RIIAGT++GG LGFYVMHR+EV YK +M+E L QYE +++K+++ + L
Subjt:  SSRSWAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKEL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACACTTCCAAAGGATCTCAATTTGAGAAGGAAAGGGAGCTGTGAAATTTGGAAAATGATGGGCAGTTCCCGTTCATGGGCTTATACGCGGATCATCGCCGGTACCATTGT
CGGCGGTGTTCTTGGCTTCTACGTAATGCACCGCGTTGAAGTTGGCTATAAGGAGAAGATGAAAGAAAGATTAAGACAATACGAAATCGAACTAAAGAAGAAAGAACAAA
TGAAAGAGCTTGAAGACTCGTCATAG
mRNA sequenceShow/hide mRNA sequence
ACACTTCCAAAGGATCTCAATTTGAGAAGGAAAGGGAGCTGTGAAATTTGGAAAATGATGGGCAGTTCCCGTTCATGGGCTTATACGCGGATCATCGCCGGTACCATTGT
CGGCGGTGTTCTTGGCTTCTACGTAATGCACCGCGTTGAAGTTGGCTATAAGGAGAAGATGAAAGAAAGATTAAGACAATACGAAATCGAACTAAAGAAGAAAGAACAAA
TGAAAGAGCTTGAAGACTCGTCATAGTTGTTTTTGCAGGTGCGGGATACATTATCTGATGCTGCAGTCTCTCGGAAGTTTGGGGAATTTTTTGTCAACTGGGCTTTGTCC
TTCAAGATTTGAAGCTGTTTGAGTTTGTCACTATTCAATTCCCTGCATTTTCGTGTGGCAGGGCGTTTGAAATCATGCGAGTATATACCCCATTCCACCACTACCTTAGA
AGTTTTTTATGGCTTGAATTTGTTGGTGAATGTTCATCGTGGCGTCAAATTCAGAATTTTTATTAGAAAGGTTAATGGATCCTTGGCGCTCTCGATTAATGCTCATACTT
CATTGCATTTGTACTGTCATAAACATGGGTGAATGAAAATTGGATTTCATATTCATATATTCGTCCTTGAAATGCTGAAAAAGGGCGACTTTTCAGGTCTCGTTATATTG
GTATATTCTTGTCATAATACAGCCGGATGGATCATAAGTGAAAGGAAAAGTTGAAATGTAAACTTTACC
Protein sequenceShow/hide protein sequence
TLPKDLNLRRKGSCEIWKMMGSSRSWAYTRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS