; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg17917 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17917
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAT-rich interactive domain protein
Genome locationCarg_Chr10:1079661..1080882
RNA-Seq ExpressionCarg17917
SyntenyCarg17917
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589553.1 hypothetical protein SDJN03_14976, partial [Cucurbita argyrosperma subsp. sororia]4.9e-102100Show/hide
Query:  MALTITNGGATCGTGGGILYRTSTRTPSNQVLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQQEEERNRMAEIAENAGVAFD
        MALTITNGGATCGTGGGILYRTSTRTPSNQVLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQQEEERNRMAEIAENAGVAFD
Subjt:  MALTITNGGATCGTGGGILYRTSTRTPSNQVLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQQEEERNRMAEIAENAGVAFD

Query:  VDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAPSLE
        VDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAPSLE
Subjt:  VDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAPSLE

XP_022134616.1 uncharacterized protein LOC111006843 [Momordica charantia]4.5e-8786.63Show/hide
Query:  MALTITNGGATCGTGGGILYRTSTRTPSNQVLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQQEEERNRMAEI------AEN
        MALTITNGGA  G+GGGILYRTST+ PSNQ L RRNALF PS EARTLHVV +KKSSFR GR DSKNRRSST+TKEQEE +EEERNRMAEI       EN
Subjt:  MALTITNGGATCGTGGGILYRTSTRTPSNQVLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQQEEERNRMAEI------AEN

Query:  AGVAFDVDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAPS
        AGVAFDVDENLPELPGLQPDFWEG +WDPLGFFLEYLWAFGIAFA+IACGIAVTTYNEGATDFKDTPAYKESVQTQE+LEEPEASNPDVFESNPTEVAPS
Subjt:  AGVAFDVDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAPS

Query:  LE
        LE
Subjt:  LE

XP_022922065.1 uncharacterized protein LOC111430129 [Cucurbita moschata]1.4e-10199.49Show/hide
Query:  MALTITNGGATCGTGGGILYRTSTRTPSNQVLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQQEEERNRMAEIAENAGVAFD
        MALTITNGGATCGTGGGILYRTSTRTPSNQVLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQQEEE+NRMAEIAENAGVAFD
Subjt:  MALTITNGGATCGTGGGILYRTSTRTPSNQVLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQQEEERNRMAEIAENAGVAFD

Query:  VDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAPSLE
        VDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAPSLE
Subjt:  VDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAPSLE

XP_022987248.1 uncharacterized protein LOC111484859 [Cucurbita maxima]4.2e-10198.98Show/hide
Query:  MALTITNGGATCGTGGGILYRTSTRTPSNQVLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQQEEERNRMAEIAENAGVAFD
        MALTITNGGATCGTGGGILYRTSTRTPSNQ LFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQ+EEERNRMAEIAENAGVAFD
Subjt:  MALTITNGGATCGTGGGILYRTSTRTPSNQVLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQQEEERNRMAEIAENAGVAFD

Query:  VDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAPSLE
        VDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAPSLE
Subjt:  VDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAPSLE

XP_023515371.1 uncharacterized protein LOC111779544 [Cucurbita pepo subsp. pepo]6.0e-10097.96Show/hide
Query:  MALTITNGGATCGTGGGILYRTSTRTPSNQVLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQQEEERNRMAEIAENAGVAFD
        MALTITNGGA CGTGGGILYRTSTRTPSNQ LFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSST TKEQEEQQE+ERNRMAEIAENAGVAFD
Subjt:  MALTITNGGATCGTGGGILYRTSTRTPSNQVLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQQEEERNRMAEIAENAGVAFD

Query:  VDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAPSLE
        VDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAPSLE
Subjt:  VDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAPSLE

TrEMBL top hitse value%identityAlignment
A0A1S3BW57 uncharacterized protein LOC1034941201.8e-8182.76Show/hide
Query:  MALTITNGGATCGTGGGILYRTSTRT-PSNQVLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQQEEERNRMA------EIAE
        M LTITNGGAT GT GGILYRT TRT PSN  LFRRNALF PSKEARTLHVV +KKSSFR GR DSKNRRSST+ KEQ++++EEERNR A       I E
Subjt:  MALTITNGGATCGTGGGILYRTSTRT-PSNQVLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQQEEERNRMA------EIAE

Query:  NAGVAFDVDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAP
        NAGV FDVDENLPELPGLQPDFWEG QWD LGFFLEYLWAFGI FA+IACGIAVTTYNEGATDFK+TPAYKESVQT+EIL EPEASNPDVFESNPTEVAP
Subjt:  NAGVAFDVDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAP

Query:  SLE
        SLE
Subjt:  SLE

A0A5A7UV79 Putative AT-rich interactive domain-containing protein 5A1.8e-8182.76Show/hide
Query:  MALTITNGGATCGTGGGILYRTSTRT-PSNQVLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQQEEERNRMA------EIAE
        M LTITNGGAT GT GGILYRT TRT PSN  LFRRNALF PSKEARTLHVV +KKSSFR GR DSKNRRSST+ KEQ++++EEERNR A       I E
Subjt:  MALTITNGGATCGTGGGILYRTSTRT-PSNQVLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQQEEERNRMA------EIAE

Query:  NAGVAFDVDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAP
        NAGV FDVDENLPELPGLQPDFWEG QWD LGFFLEYLWAFGI FA+IACGIAVTTYNEGATDFK+TPAYKESVQT+EIL EPEASNPDVFESNPTEVAP
Subjt:  NAGVAFDVDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAP

Query:  SLE
        SLE
Subjt:  SLE

A0A6J1BYA9 uncharacterized protein LOC1110068432.2e-8786.63Show/hide
Query:  MALTITNGGATCGTGGGILYRTSTRTPSNQVLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQQEEERNRMAEI------AEN
        MALTITNGGA  G+GGGILYRTST+ PSNQ L RRNALF PS EARTLHVV +KKSSFR GR DSKNRRSST+TKEQEE +EEERNRMAEI       EN
Subjt:  MALTITNGGATCGTGGGILYRTSTRTPSNQVLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQQEEERNRMAEI------AEN

Query:  AGVAFDVDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAPS
        AGVAFDVDENLPELPGLQPDFWEG +WDPLGFFLEYLWAFGIAFA+IACGIAVTTYNEGATDFKDTPAYKESVQTQE+LEEPEASNPDVFESNPTEVAPS
Subjt:  AGVAFDVDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAPS

Query:  LE
        LE
Subjt:  LE

A0A6J1E7K1 uncharacterized protein LOC1114301296.9e-10299.49Show/hide
Query:  MALTITNGGATCGTGGGILYRTSTRTPSNQVLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQQEEERNRMAEIAENAGVAFD
        MALTITNGGATCGTGGGILYRTSTRTPSNQVLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQQEEE+NRMAEIAENAGVAFD
Subjt:  MALTITNGGATCGTGGGILYRTSTRTPSNQVLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQQEEERNRMAEIAENAGVAFD

Query:  VDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAPSLE
        VDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAPSLE
Subjt:  VDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAPSLE

A0A6J1JIX0 uncharacterized protein LOC1114848592.0e-10198.98Show/hide
Query:  MALTITNGGATCGTGGGILYRTSTRTPSNQVLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQQEEERNRMAEIAENAGVAFD
        MALTITNGGATCGTGGGILYRTSTRTPSNQ LFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQ+EEERNRMAEIAENAGVAFD
Subjt:  MALTITNGGATCGTGGGILYRTSTRTPSNQVLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQQEEERNRMAEIAENAGVAFD

Query:  VDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAPSLE
        VDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAPSLE
Subjt:  VDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAPSLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73885.1 unknown protein1.5e-2740.31Show/hide
Query:  MALTITNGGATCGTGGGILYRTSTRTPSNQVLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQQEEERNRMAEIAENAGVAFD
        MALT+++G      GGG   R +  T S++  F    L +    +RT       +        D +N  S     +++  +     R     ++A     
Subjt:  MALTITNGGATCGTGGGILYRTSTRTPSNQVLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQQEEERNRMAEIAENAGVAFD

Query:  VDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASN-PDVFESNPTEVAPSL
            + +LPGL+PD +EG++WD LGFF++YLWAFGI FA+I+ G+A  TYNEGATDFK+TP YKE++Q++++L+E E+SN  DVFESNPTEVAP++
Subjt:  VDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASN-PDVFESNPTEVAPSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTGACCATAACCAATGGCGGCGCCACTTGTGGCACCGGCGGGGGAATTCTCTATAGAACCTCCACCAGAACTCCTTCTAACCAAGTCCTTTTCCGTCGCAACGC
GCTCTTTTCGCCGTCTAAAGAAGCCCGCACCCTCCATGTCGTTCATTCAAAGAAATCCTCCTTCCGAATTGGCCGAATCGACAGTAAGAACCGGAGGAGCTCGACGTCAA
CCAAGGAACAGGAAGAACAACAAGAAGAAGAACGAAATCGGATGGCCGAAATTGCTGAAAATGCCGGTGTAGCGTTTGATGTGGATGAGAATTTGCCGGAATTGCCTGGG
CTCCAGCCTGATTTCTGGGAGGGTCAGCAGTGGGATCCCCTCGGCTTCTTCCTCGAGTACTTGTGGGCCTTTGGCATCGCTTTCGCGGTAATTGCATGTGGGATTGCTGT
CACTACATACAACGAAGGAGCCACTGATTTCAAGGACACGCCTGCATACAAAGAATCAGTTCAAACTCAAGAGATATTAGAAGAACCAGAGGCATCAAACCCAGATGTCT
TTGAATCTAATCCAACAGAGGTGGCTCCTAGTTTGGAATGA
mRNA sequenceShow/hide mRNA sequence
CTCTATCTCCTTATCCGCACAATCCTCCTCCTCCATTTTTCTGGGTGTTCAGAGCTCACTCTCCTCCACTCAAATGGCTCTGACCATAACCAATGGCGGCGCCACTTGTG
GCACCGGCGGGGGAATTCTCTATAGAACCTCCACCAGAACTCCTTCTAACCAAGTCCTTTTCCGTCGCAACGCGCTCTTTTCGCCGTCTAAAGAAGCCCGCACCCTCCAT
GTCGTTCATTCAAAGAAATCCTCCTTCCGAATTGGCCGAATCGACAGTAAGAACCGGAGGAGCTCGACGTCAACCAAGGAACAGGAAGAACAACAAGAAGAAGAACGAAA
TCGGATGGCCGAAATTGCTGAAAATGCCGGTGTAGCGTTTGATGTGGATGAGAATTTGCCGGAATTGCCTGGGCTCCAGCCTGATTTCTGGGAGGGTCAGCAGTGGGATC
CCCTCGGCTTCTTCCTCGAGTACTTGTGGGCCTTTGGCATCGCTTTCGCGGTAATTGCATGTGGGATTGCTGTCACTACATACAACGAAGGAGCCACTGATTTCAAGGAC
ACGCCTGCATACAAAGAATCAGTTCAAACTCAAGAGATATTAGAAGAACCAGAGGCATCAAACCCAGATGTCTTTGAATCTAATCCAACAGAGGTGGCTCCTAGTTTGGA
ATGATCTTGATATTTCGATATCAAAAACAGACCCCACATCTTGAATCCATTATCATCCTCGTAAGCAGTTAAAGAAGTGAAAAGGAAACAAAGAATACTGTGTGAATTTG
TAATGCCATAAGCTTTCTAGGTATGTTATGAAAACCTTATTCTATTGAATCTAGTAAAGATTTTGATTTTGCATGTCTTAGTTTTCTTGTCACCATATTGTTCTTCT
Protein sequenceShow/hide protein sequence
MALTITNGGATCGTGGGILYRTSTRTPSNQVLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTSTKEQEEQQEEERNRMAEIAENAGVAFDVDENLPELPG
LQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAPSLE