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Carg17940 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17940
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSCAPER_N domain-containing protein
Genome locationCarg_Chr10:991959..992479
RNA-Seq ExpressionCarg17940
SyntenyCarg17940
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589532.1 SNAP25-likeous protein SNAP33, partial [Cucurbita argyrosperma subsp. sororia]4.2e-1684.21Show/hide
Query:  LSNLLDHPQ---IGLLLLESLSIVAHFALFHPENQQVLRWGKSPTILHKVRDLPFVF
        L NL D      IGLLLLESLSIVAHFALFHPENQQVLRWGKSPTILHKV DLPFVF
Subjt:  LSNLLDHPQ---IGLLLLESLSIVAHFALFHPENQQVLRWGKSPTILHKVRDLPFVF

KAG7023217.1 hypothetical protein SDJN02_14242, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-32100Show/hide
Query:  FKLSNLLDHPQIGLLLLESLSIVAHFALFHPENQQVLRWGKSPTILHKVRDLPFVFCILQRPRTDASVG
        FKLSNLLDHPQIGLLLLESLSIVAHFALFHPENQQVLRWGKSPTILHKVRDLPFVFCILQRPRTDASVG
Subjt:  FKLSNLLDHPQIGLLLLESLSIVAHFALFHPENQQVLRWGKSPTILHKVRDLPFVFCILQRPRTDASVG

XP_022930561.1 uncharacterized protein LOC111436972 isoform X1 [Cucurbita moschata]1.8e-1491.11Show/hide
Query:  IGLLLLESLSIVAHFALFHPENQQVLRWGKSPTILHKVRDLPFVF
        IGLLLLESLSI+ HFALFHPENQ+VLRWGKSPTILHKV DLPFVF
Subjt:  IGLLLLESLSIVAHFALFHPENQQVLRWGKSPTILHKVRDLPFVF

XP_022972181.1 uncharacterized protein LOC111470776 isoform X2 [Cucurbita maxima]1.8e-1491.11Show/hide
Query:  IGLLLLESLSIVAHFALFHPENQQVLRWGKSPTILHKVRDLPFVF
        IGLLLLESLSI+ HFALFHPENQ+VLRWGKSPTILHKV DLPFVF
Subjt:  IGLLLLESLSIVAHFALFHPENQQVLRWGKSPTILHKVRDLPFVF

XP_023529956.1 uncharacterized protein LOC111792645 isoform X2 [Cucurbita pepo subsp. pepo]1.8e-1491.11Show/hide
Query:  IGLLLLESLSIVAHFALFHPENQQVLRWGKSPTILHKVRDLPFVF
        IGLLLLESLSI+ HFALFHPENQ+VLRWGKSPTILHKV DLPFVF
Subjt:  IGLLLLESLSIVAHFALFHPENQQVLRWGKSPTILHKVRDLPFVF

TrEMBL top hitse value%identityAlignment
A0A6J1BYK0 uncharacterized protein LOC111006915 isoform X21.9e-1489.13Show/hide
Query:  QIGLLLLESLSIVAHFALFHPENQQVLRWGKSPTILHKVRDLPFVF
        QIGLLLLESLSI+ HFALFHPENQ+VL WGKSPTILHKV DLPFVF
Subjt:  QIGLLLLESLSIVAHFALFHPENQQVLRWGKSPTILHKVRDLPFVF

A0A6J1ERA8 uncharacterized protein LOC111436972 isoform X28.6e-1591.11Show/hide
Query:  IGLLLLESLSIVAHFALFHPENQQVLRWGKSPTILHKVRDLPFVF
        IGLLLLESLSI+ HFALFHPENQ+VLRWGKSPTILHKV DLPFVF
Subjt:  IGLLLLESLSIVAHFALFHPENQQVLRWGKSPTILHKVRDLPFVF

A0A6J1EX75 uncharacterized protein LOC111436972 isoform X18.6e-1591.11Show/hide
Query:  IGLLLLESLSIVAHFALFHPENQQVLRWGKSPTILHKVRDLPFVF
        IGLLLLESLSI+ HFALFHPENQ+VLRWGKSPTILHKV DLPFVF
Subjt:  IGLLLLESLSIVAHFALFHPENQQVLRWGKSPTILHKVRDLPFVF

A0A6J1I587 uncharacterized protein LOC111470776 isoform X18.6e-1591.11Show/hide
Query:  IGLLLLESLSIVAHFALFHPENQQVLRWGKSPTILHKVRDLPFVF
        IGLLLLESLSI+ HFALFHPENQ+VLRWGKSPTILHKV DLPFVF
Subjt:  IGLLLLESLSIVAHFALFHPENQQVLRWGKSPTILHKVRDLPFVF

A0A6J1I597 uncharacterized protein LOC111470776 isoform X28.6e-1591.11Show/hide
Query:  IGLLLLESLSIVAHFALFHPENQQVLRWGKSPTILHKVRDLPFVF
        IGLLLLESLSI+ HFALFHPENQ+VLRWGKSPTILHKV DLPFVF
Subjt:  IGLLLLESLSIVAHFALFHPENQQVLRWGKSPTILHKVRDLPFVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTAAGCTTTCAAACCTGCTTGATCATCCTCAGATTGGTCTTCTGCTTCTTGAGTCTTTGTCCATTGTTGCCCATTTTGCTCTGTTCCATCCTGAGAATCAACAAGTTCT
TCGCTGGGGAAAGAGCCCTACCATACTCCACAAGGTGCGCGACCTGCCGTTCGTATTCTGTATTCTTCAGCGACCCCGAACTGATGCCAGTGTTGGCTAG
mRNA sequenceShow/hide mRNA sequence
TTTAAGCTTTCAAACCTGCTTGATCATCCTCAGATTGGTCTTCTGCTTCTTGAGTCTTTGTCCATTGTTGCCCATTTTGCTCTGTTCCATCCTGAGAATCAACAAGTTCT
TCGCTGGGGAAAGAGCCCTACCATACTCCACAAGGTGCGCGACCTGCCGTTCGTATTCTGTATTCTTCAGCGACCCCGAACTGATGCCAGTGTTGGCTAGTACCCTGGTC
GCTGCTTGTTGAGTGTGCGCAGAACAAGTCCGTTGTCCTGCAGGAACTAAGCATAGACATGCTGCTCTCGTTATTGAGATCCTGCAAAAATAATCCGCTAGTGTCAGCTG
TGCAATCCAATTCAACACAAGAACGATGAATCAAATGAATGTAACCCAAATGGTGTCGAGTCTCCTAGTAGGAAGGCCGACCACTACATAAGCAGAAGCAAGCTACCTTT
CTTTG
Protein sequenceShow/hide protein sequence
FKLSNLLDHPQIGLLLLESLSIVAHFALFHPENQQVLRWGKSPTILHKVRDLPFVFCILQRPRTDASVG