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Carg17965 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17965
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPolyprotein
Genome locationCarg_Chr11:4194092..4200941
RNA-Seq ExpressionCarg17965
SyntenyCarg17965
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051217.1 polyprotein [Cucumis melo var. makuwa]9.9e-1669.35Show/hide
Query:  GTKPIRLTWRTCYKLQNSALAEALIKSPHGRTEFFQTDFENSDVAVPKVSIWDDVLCKVVDL
        GT PI L WRTCYKLQ SA   ALI+SP G+T FFQTDFENS VAV KVS WD+V+CK  D+
Subjt:  GTKPIRLTWRTCYKLQNSALAEALIKSPHGRTEFFQTDFENSDVAVPKVSIWDDVLCKVVDL
KAG6588194.1 hypothetical protein SDJN03_16759, partial [Cucurbita argyrosperma subsp. sororia]5.1e-2887.67Show/hide
Query:  MDATELGTKPIRLTWRTCYKLQNSALAEALIKSPHGRTEFFQTDFENSDVAVPKVSIWDDVLCKVVDLFQSEK
        M    L TKPIRLTWRTCYKLQNSALAEALI+S HGRT FFQTDFENSDVAVPKVSIWDDVLCKV+DLFQSEK
Subjt:  MDATELGTKPIRLTWRTCYKLQNSALAEALIKSPHGRTEFFQTDFENSDVAVPKVSIWDDVLCKVVDLFQSEK
KAG7022092.1 hypothetical protein SDJN02_15821, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-34100Show/hide
Query:  MDATELGTKPIRLTWRTCYKLQNSALAEALIKSPHGRTEFFQTDFENSDVAVPKVSIWDDVLCKVVDLFQSEK
        MDATELGTKPIRLTWRTCYKLQNSALAEALIKSPHGRTEFFQTDFENSDVAVPKVSIWDDVLCKVVDLFQSEK
Subjt:  MDATELGTKPIRLTWRTCYKLQNSALAEALIKSPHGRTEFFQTDFENSDVAVPKVSIWDDVLCKVVDLFQSEK
KGN66494.1 hypothetical protein Csa_006902 [Cucumis sativus]8.4e-1571.19Show/hide
Query:  GTKPIRLTWRTCYKLQNSALAEALIKSPHGRTEFFQTDFENSDVAVPKVSIWDDVLCKV
        GT PI L WRTCYKLQ SAL  ALI+SP G+T FFQT+FENS VA  KVS WD+V+CKV
Subjt:  GTKPIRLTWRTCYKLQNSALAEALIKSPHGRTEFFQTDFENSDVAVPKVSIWDDVLCKV
TYK18873.1 polyprotein [Cucumis melo var. makuwa]9.9e-1669.35Show/hide
Query:  GTKPIRLTWRTCYKLQNSALAEALIKSPHGRTEFFQTDFENSDVAVPKVSIWDDVLCKVVDL
        GT PI L WRTCYKLQ SA   ALI+SP G+T FFQTDFENS VAV KVS WD+V+CK  D+
Subjt:  GTKPIRLTWRTCYKLQNSALAEALIKSPHGRTEFFQTDFENSDVAVPKVSIWDDVLCKVVDL
TrEMBL top hitse value%identityAlignment
A0A0A0LXM3 Uncharacterized protein8.5e-0546.88Show/hide
Query:  MDATELGTKPIRLTWRTCYKL-QNSALAEALIKSPHGRTEFFQTDF--ENSDVAVPKVSIWDDV
        +D    G+ PI +T RTCYKL QN   +EALI+SP G+T FFQ +   ++ D  V KV++W+ V
Subjt:  MDATELGTKPIRLTWRTCYKL-QNSALAEALIKSPHGRTEFFQTDF--ENSDVAVPKVSIWDDV
A0A0A0LZS0 Uncharacterized protein4.1e-1571.19Show/hide
Query:  GTKPIRLTWRTCYKLQNSALAEALIKSPHGRTEFFQTDFENSDVAVPKVSIWDDVLCKV
        GT PI L WRTCYKLQ SAL  ALI+SP G+T FFQT+FENS VA  KVS WD+V+CKV
Subjt:  GTKPIRLTWRTCYKLQNSALAEALIKSPHGRTEFFQTDFENSDVAVPKVSIWDDVLCKV
A0A5A7U9X3 Polyprotein4.8e-1669.35Show/hide
Query:  GTKPIRLTWRTCYKLQNSALAEALIKSPHGRTEFFQTDFENSDVAVPKVSIWDDVLCKVVDL
        GT PI L WRTCYKLQ SA   ALI+SP G+T FFQTDFENS VAV KVS WD+V+CK  D+
Subjt:  GTKPIRLTWRTCYKLQNSALAEALIKSPHGRTEFFQTDFENSDVAVPKVSIWDDVLCKVVDL
A0A5D3D5V1 Polyprotein4.8e-1669.35Show/hide
Query:  GTKPIRLTWRTCYKLQNSALAEALIKSPHGRTEFFQTDFENSDVAVPKVSIWDDVLCKVVDL
        GT PI L WRTCYKLQ SA   ALI+SP G+T FFQTDFENS VAV KVS WD+V+CK  D+
Subjt:  GTKPIRLTWRTCYKLQNSALAEALIKSPHGRTEFFQTDFENSDVAVPKVSIWDDVLCKVVDL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCTACTGAACTTGGGACAAAGCCAATTAGATTGACGTGGAGAACTTGTTACAAGCTGCAAAACAGTGCTTTGGCTGAGGCTTTGATTAAGAGCCCACATGGCAG
AACTGAGTTTTTTCAGACAGATTTTGAGAACTCCGATGTTGCTGTTCCGAAGGTTTCAATATGGGATGACGTTCTTTGCAAAGTTGTGGATTTATTTCAGTCTGAGAAAT
AA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCTACTGAACTTGGGACAAAGCCAATTAGATTGACGTGGAGAACTTGTTACAAGCTGCAAAACAGTGCTTTGGCTGAGGCTTTGATTAAGAGCCCACATGGCAG
AACTGAGTTTTTTCAGACAGATTTTGAGAACTCCGATGTTGCTGTTCCGAAGGTTTCAATATGGGATGACGTTCTTTGCAAAGTTGTGGATTTATTTCAGTCTGAGAAAT
AATCAATTCTCTCTAAGTTTTGATCAAATTTAGATATGATCAACTTTTTTAATTACCTTTAAATATGTGTTTAGAACACTTATAGTGTGTCTAAAGTTATTGTACTTTGT
GATTTCTATGGCTTTTAATTATTGAATAAATCTTAATTGTGTG
Protein sequenceShow/hide protein sequence
MDATELGTKPIRLTWRTCYKLQNSALAEALIKSPHGRTEFFQTDFENSDVAVPKVSIWDDVLCKVVDLFQSEK