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Carg18004 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18004
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDNA (Cytosine-5)-methyltransferase CMT3-like
Genome locationCarg_Chr11:3896646..3896996
RNA-Seq ExpressionCarg18004
SyntenyCarg18004
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653489.1 hypothetical protein Csa_006929, partial [Cucumis sativus]4.6e-2375Show/hide
Query:  STTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGGGGGNSYYSHNQTAVGFPWGVG
        S +FSDQWLLATIALII GFLAYA+YDAA+ASASEV QRLV+VSPLLLVV VHWLSLG  GG       Y++N +AVGFPWGVG
Subjt:  STTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGGGGGNSYYSHNQTAVGFPWGVG

KAG6588160.1 hypothetical protein SDJN03_16725, partial [Cucurbita argyrosperma subsp. sororia]2.8e-52100Show/hide
Query:  MAAYTRSTTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPW
        MAAYTRSTTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPW
Subjt:  MAAYTRSTTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPW

Query:  SAAILLLMLYFFFLTN
        SAAILLLMLYFFFLTN
Subjt:  SAAILLLMLYFFFLTN

OMP03394.1 hypothetical protein COLO4_10451 [Corchorus olitorius]2.5e-1353.12Show/hide
Query:  TRSTTF--SDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLF
        +R++TF  S+QWLL T ++++ GFL Y +YDA +A+A+E+LQRL+I+SPLLLVVVVHWLS G         S       A G PWGV F+LLLL F
Subjt:  TRSTTF--SDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLF

XP_011660097.1 uncharacterized protein LOC105436341 [Cucumis sativus]8.9e-3579.09Show/hide
Query:  STTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPWSAAILL
        S +FSDQWLLATIALII GFLAYA+YDAA+ASASEV QRLV+VSPLLLVV VHWLSLG  GG       Y++N +AVGFPWGVGFLLLLLLFPWS AILL
Subjt:  STTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPWSAAILL

Query:  LMLYFFFLTN
        L+LYFFFLTN
Subjt:  LMLYFFFLTN

XP_022157357.1 uncharacterized protein LOC111024080 [Momordica charantia]1.0e-3071.55Show/hide
Query:  MAAYTRSTTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPW
        MAA TRS   S+QWLLAT+ALI  GFLAYAIYDAA+AS +E+ QR+V+VSPLLLVV VHWLS+GGG  G G        Q AVGFPWGVG LLLL+LFPW
Subjt:  MAAYTRSTTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPW

Query:  SAAILLLMLYFFFLTN
        SAA+LLL+LYFFFLTN
Subjt:  SAAILLLMLYFFFLTN

TrEMBL top hitse value%identityAlignment
A0A0A0M2K2 Uncharacterized protein4.3e-3579.09Show/hide
Query:  STTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPWSAAILL
        S +FSDQWLLATIALII GFLAYA+YDAA+ASASEV QRLV+VSPLLLVV VHWLSLG  GG       Y++N +AVGFPWGVGFLLLLLLFPWS AILL
Subjt:  STTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPWSAAILL

Query:  LMLYFFFLTN
        L+LYFFFLTN
Subjt:  LMLYFFFLTN

A0A1R3HRX6 Uncharacterized protein3.6e-1353.19Show/hide
Query:  TRSTTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLF
        T   T S+QWLL T ++++ GFL Y +YDA +A+A+E+LQRL+I+SPLLLVVVVHWLS G         S       A G PWGV F+LLLL F
Subjt:  TRSTTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLF

A0A1R3K8K8 Uncharacterized protein1.2e-1353.12Show/hide
Query:  TRSTTF--SDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLF
        +R++TF  S+QWLL T ++++ GFL Y +YDA +A+A+E+LQRL+I+SPLLLVVVVHWLS G         S       A G PWGV F+LLLL F
Subjt:  TRSTTF--SDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLF

A0A5A7TFN5 DNA (Cytosine-5)-methyltransferase CMT3-like4.3e-3579.09Show/hide
Query:  STTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPWSAAILL
        S +FSDQWLLATIALII GFLAYA+YDAA+ASASEV QRLV+VSPLLLVV VHWLSLG  GG       Y++N +AVGFPWGVGFLLLLLLFPWS AILL
Subjt:  STTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPWSAAILL

Query:  LMLYFFFLTN
        L+LYFFFLTN
Subjt:  LMLYFFFLTN

A0A6J1DUA1 uncharacterized protein LOC1110240804.9e-3171.55Show/hide
Query:  MAAYTRSTTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPW
        MAA TRS   S+QWLLAT+ALI  GFLAYAIYDAA+AS +E+ QR+V+VSPLLLVV VHWLS+GGG  G G        Q AVGFPWGVG LLLL+LFPW
Subjt:  MAAYTRSTTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPW

Query:  SAAILLLMLYFFFLTN
        SAA+LLL+LYFFFLTN
Subjt:  SAAILLLMLYFFFLTN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCATACACCAGATCAACAACCTTCTCAGACCAATGGCTTCTTGCAACCATAGCTCTTATAATCTCCGGATTCTTAGCCTATGCCATTTACGACGCCGCCATCGC
CTCGGCCTCCGAGGTGTTACAGAGGCTCGTCATCGTCTCGCCCCTGCTTTTGGTCGTCGTCGTTCACTGGCTGTCCCTCGGCGGCGGCGGCGGCGGCGGCGGCGGAAACA
GTTACTACAGCCATAACCAGACGGCTGTGGGATTTCCATGGGGTGTTGGGTTTCTTTTGCTTTTGCTTCTATTTCCATGGAGTGCTGCCATTCTTCTTCTTATGCTTTAT
TTCTTCTTTCTTACCAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCATACACCAGATCAACAACCTTCTCAGACCAATGGCTTCTTGCAACCATAGCTCTTATAATCTCCGGATTCTTAGCCTATGCCATTTACGACGCCGCCATCGC
CTCGGCCTCCGAGGTGTTACAGAGGCTCGTCATCGTCTCGCCCCTGCTTTTGGTCGTCGTCGTTCACTGGCTGTCCCTCGGCGGCGGCGGCGGCGGCGGCGGCGGAAACA
GTTACTACAGCCATAACCAGACGGCTGTGGGATTTCCATGGGGTGTTGGGTTTCTTTTGCTTTTGCTTCTATTTCCATGGAGTGCTGCCATTCTTCTTCTTATGCTTTAT
TTCTTCTTTCTTACCAACTGA
Protein sequenceShow/hide protein sequence
MAAYTRSTTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPWSAAILLLMLY
FFFLTN