; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg18007 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18007
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionleucine-rich repeat protein 1-like
Genome locationCarg_Chr11:3873113..3876476
RNA-Seq ExpressionCarg18007
SyntenyCarg18007
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022050.1 Leucine-rich repeat protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-50100Show/hide
Query:  MAATRDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFFFENNPRMEGPELLGLASYDTNCT
        MAATRDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFFFENNPRMEGPELLGLASYDTNCT
Subjt:  MAATRDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFFFENNPRMEGPELLGLASYDTNCT

KAG7023886.1 Leucine-rich repeat protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]9.4e-4164.63Show/hide
Query:  AATRDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF------------------------
        A  RDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIP SLGKLKSLVF                         
Subjt:  AATRDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF------------------------

Query:  ------------------------FENNPRMEGPELLGLASYDTNCT
                                FENNPRMEGPELLGLASYDTNCT
Subjt:  ------------------------FENNPRMEGPELLGLASYDTNCT

XP_022929661.1 leucine-rich repeat protein 1-like [Cucurbita moschata]3.6e-4065.73Show/hide
Query:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------
        DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVF                             
Subjt:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------

Query:  --------------------FENNPRMEGPELLGLASYDTNCT
                            FENNPRMEGPELLGLASYDTNCT
Subjt:  --------------------FENNPRMEGPELLGLASYDTNCT

XP_022968251.1 leucine-rich repeat protein 1-like [Cucurbita maxima]3.6e-4065.73Show/hide
Query:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------
        DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVF                             
Subjt:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------

Query:  --------------------FENNPRMEGPELLGLASYDTNCT
                            FENNPRMEGPELLGLASYDTNCT
Subjt:  --------------------FENNPRMEGPELLGLASYDTNCT

XP_023531685.1 leucine-rich repeat protein 1-like [Cucurbita pepo subsp. pepo]3.6e-4065.73Show/hide
Query:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------
        DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVF                             
Subjt:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------

Query:  --------------------FENNPRMEGPELLGLASYDTNCT
                            FENNPRMEGPELLGLASYDTNCT
Subjt:  --------------------FENNPRMEGPELLGLASYDTNCT

TrEMBL top hitse value%identityAlignment
A0A0A0LZF7 LRRNT_2 domain-containing protein2.3e-4065.03Show/hide
Query:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------
        DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIP+SLGKLKSLVF                             
Subjt:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------

Query:  --------------------FENNPRMEGPELLGLASYDTNCT
                            FENNPRMEGPELLGLASYDTNCT
Subjt:  --------------------FENNPRMEGPELLGLASYDTNCT

A0A6J1ENS2 leucine-rich repeat protein 1-like1.7e-4065.73Show/hide
Query:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------
        DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVF                             
Subjt:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------

Query:  --------------------FENNPRMEGPELLGLASYDTNCT
                            FENNPRMEGPELLGLASYDTNCT
Subjt:  --------------------FENNPRMEGPELLGLASYDTNCT

A0A6J1H928 leucine-rich repeat protein 15.0e-4065.03Show/hide
Query:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------
        DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIP SLGKLKSLVF                             
Subjt:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------

Query:  --------------------FENNPRMEGPELLGLASYDTNCT
                            FENNPRMEGPELLGLASYDTNCT
Subjt:  --------------------FENNPRMEGPELLGLASYDTNCT

A0A6J1HUC7 leucine-rich repeat protein 1-like1.7e-4065.73Show/hide
Query:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------
        DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVF                             
Subjt:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------

Query:  --------------------FENNPRMEGPELLGLASYDTNCT
                            FENNPRMEGPELLGLASYDTNCT
Subjt:  --------------------FENNPRMEGPELLGLASYDTNCT

A0A6J1JGK7 leucine-rich repeat protein 12.9e-4065.03Show/hide
Query:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------
        DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIP+SLGKLKSLVF                             
Subjt:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------

Query:  --------------------FENNPRMEGPELLGLASYDTNCT
                            FENNPRMEGPELLGLASYDTNCT
Subjt:  --------------------FENNPRMEGPELLGLASYDTNCT

SwissProt top hitse value%identityAlignment
B8ABC2 Leucine-rich repeat protein 15.7e-3354.23Show/hide
Query:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------
        DLGN NLSGHLVPELG+L+HLQYLELYKNNI GTIP ELGNLK+LISLDLY NNI+G IP +LGKL SLVF                             
Subjt:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------

Query:  --------------------FENNPRMEGPELLGLASYDTNC
                            FE NPR+EGPEL GLA YDTNC
Subjt:  --------------------FENNPRMEGPELLGLASYDTNC

Q5VQP7 Leucine-rich repeat protein 15.7e-3354.23Show/hide
Query:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------
        DLGN NLSGHLVPELG+L+HLQYLELYKNNI GTIP ELGNLK+LISLDLY NNI+G IP +LGKL SLVF                             
Subjt:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------

Query:  --------------------FENNPRMEGPELLGLASYDTNC
                            FE NPR+EGPEL GLA YDTNC
Subjt:  --------------------FENNPRMEGPELLGLASYDTNC

Q6NQP4 Leucine-rich repeat protein 21.3e-3759.44Show/hide
Query:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------
        DLGNSNLSGHLVPELG+LEHLQYLELYKN I GTIP ELGNLKSLISLDLYNNN+TG+IP SLGKLKSLVF                             
Subjt:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------

Query:  --------------------FENNPRMEGPELLGLASYDTNCT
                            FENN R+EGPELLGLASYDTNCT
Subjt:  --------------------FENNPRMEGPELLGLASYDTNCT

Q9FPJ5 Leucine-rich repeat protein 14.5e-3858.74Show/hide
Query:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------
        DLGNSNLSGHL PELG+LEHLQYLELYKNNI GTIP ELGNLK+LISLDLYNNN+TG +P SLGKLKSLVF                             
Subjt:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------

Query:  --------------------FENNPRMEGPELLGLASYDTNCT
                            FENNPR+EGPELLGLASYDTNCT
Subjt:  --------------------FENNPRMEGPELLGLASYDTNCT

Q9XIC7 Somatic embryogenesis receptor kinase 29.2e-2357.61Show/hide
Query:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFFFENNPRMEGPELLGLASYDT
        DLGN++LSG LVP+LG+L++LQYLELY NNI G +P +LGNL +L+SLDLY N+ TG IP SLGKL  L F   NN  + GP  + L +  T
Subjt:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFFFENNPRMEGPELLGLASYDT

Arabidopsis top hitse value%identityAlignment
AT1G34210.1 somatic embryogenesis receptor-like kinase 26.5e-2457.61Show/hide
Query:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFFFENNPRMEGPELLGLASYDT
        DLGN++LSG LVP+LG+L++LQYLELY NNI G +P +LGNL +L+SLDLY N+ TG IP SLGKL  L F   NN  + GP  + L +  T
Subjt:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFFFENNPRMEGPELLGLASYDT

AT1G71830.1 somatic embryogenesis receptor-like kinase 11.1e-2358.7Show/hide
Query:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFFFENNPRMEGPELLGLASYDT
        DLGN+ LSGHLVPELG L++LQYLELY NNI G IP  LGNL +L+SLDLY N+ +G IP SLGKL  L F   NN  + G   + L +  T
Subjt:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFFFENNPRMEGPELLGLASYDT

AT3G43740.1 Leucine-rich repeat (LRR) family protein9.3e-3959.44Show/hide
Query:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------
        DLGNSNLSGHLVPELG+LEHLQYLELYKN I GTIP ELGNLKSLISLDLYNNN+TG+IP SLGKLKSLVF                             
Subjt:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------

Query:  --------------------FENNPRMEGPELLGLASYDTNCT
                            FENN R+EGPELLGLASYDTNCT
Subjt:  --------------------FENNPRMEGPELLGLASYDTNCT

AT3G43740.2 Leucine-rich repeat (LRR) family protein5.3e-3449.13Show/hide
Query:  DLGNSNLSGHLVPELGRLEHLQYL------------------------------ELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLV
        DLGNSNLSGHLVPELG+LEHLQYL                              ELYKN I GTIP ELGNLKSLISLDLYNNN+TG+IP SLGKLKSLV
Subjt:  DLGNSNLSGHLVPELGRLEHLQYL------------------------------ELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLV

Query:  FF------------------------------------------------FENNPRMEGPELLGLASYDTNCT
        F                                                 FENN R+EGPELLGLASYDTNCT
Subjt:  FF------------------------------------------------FENNPRMEGPELLGLASYDTNCT

AT5G21090.1 Leucine-rich repeat (LRR) family protein3.2e-3958.74Show/hide
Query:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------
        DLGNSNLSGHL PELG+LEHLQYLELYKNNI GTIP ELGNLK+LISLDLYNNN+TG +P SLGKLKSLVF                             
Subjt:  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFF----------------------------

Query:  --------------------FENNPRMEGPELLGLASYDTNCT
                            FENNPR+EGPELLGLASYDTNCT
Subjt:  --------------------FENNPRMEGPELLGLASYDTNCT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCGACTCGGGACTTGGGCAATTCCAATCTGTCTGGACATCTGGTTCCTGAACTAGGAAGGCTCGAGCACCTGCAATATCTGGAACTTTACAAAAACAACATTCA
TGGAACTATCCCAGATGAGCTTGGAAACCTGAAGAGCCTCATCAGTTTGGACTTGTATAACAACAACATCACTGGAAGGATTCCAATTTCATTGGGGAAATTGAAATCTC
TTGTGTTCTTCTTTGAGAATAACCCTAGAATGGAAGGACCAGAATTGTTGGGACTTGCTAGCTATGACACAAATTGCACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCGACTCGGGACTTGGGCAATTCCAATCTGTCTGGACATCTGGTTCCTGAACTAGGAAGGCTCGAGCACCTGCAATATCTGGAACTTTACAAAAACAACATTCA
TGGAACTATCCCAGATGAGCTTGGAAACCTGAAGAGCCTCATCAGTTTGGACTTGTATAACAACAACATCACTGGAAGGATTCCAATTTCATTGGGGAAATTGAAATCTC
TTGTGTTCTTCTTTGAGAATAACCCTAGAATGGAAGGACCAGAATTGTTGGGACTTGCTAGCTATGACACAAATTGCACATAGAAGAAGGGTAAGGTGATGCTACAAAAT
TACAGCTTCAGAATGAGATAGTAAAAGTGTTATTTTCACTCTCTAGTGAACTGGGGATTATATTACTAAATCCAAAATTACAAATTAGTGTTTGTAAAGTGTAACGCCAA
ATGATTCGGTATTTGTATTGTAACTCGTGTATTTTTCTTCTGCCACGACATTGAATTTGTGCTAATGTAATTCTACCAACTAGTCTCTACTTGTTTATTCATTTTGCTAT
CTGTTCAGTAAAGACAGCAGGAATTTATCTTATTTTGGTTTCTCTTTTCTTAGTAATTTTCGTTTTTGA
Protein sequenceShow/hide protein sequence
MAATRDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFFFENNPRMEGPELLGLASYDTNCT