; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg18048 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18048
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2
Genome locationCarg_Chr11:11968613..11970433
RNA-Seq ExpressionCarg18048
SyntenyCarg18048
Gene Ontology termsGO:0000741 - karyogamy (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589135.1 DDB1- and CUL4-associated factor 13, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1297.96Show/hide
Query:  MASFAARAILRSSSGKATALLSAGARAGSARSTFRISSERSFSQCAVCK
        MASFAARAILRSSSG ATALLSAGARAGSARSTFRISSERSFSQCAVCK
Subjt:  MASFAARAILRSSSGKATALLSAGARAGSARSTFRISSERSFSQCAVCK

KAG7022834.1 hypothetical protein SDJN02_16570 [Cucurbita argyrosperma subsp. argyrosperma]5.6e-20100Show/hide
Query:  MASFAARAILRSSSGKATALLSAGARAGSARSTFRISSERSFSQCAVCKNAGRVLVLLQET
        MASFAARAILRSSSGKATALLSAGARAGSARSTFRISSERSFSQCAVCKNAGRVLVLLQET
Subjt:  MASFAARAILRSSSGKATALLSAGARAGSARSTFRISSERSFSQCAVCKNAGRVLVLLQET

XP_038887455.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X1 [Benincasa hispida]1.0e-0574.47Show/hide
Query:  MASFAARAILRSSSGKATALLSAGARAGSARSTFRISSERSFSQCAV
        MASFA RAI RSSSGKA  LLS GARA  ARS FRI+S+R FSQC+V
Subjt:  MASFAARAILRSSSGKATALLSAGARAGSARSTFRISSERSFSQCAV

XP_038887456.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X2 [Benincasa hispida]1.0e-0574.47Show/hide
Query:  MASFAARAILRSSSGKATALLSAGARAGSARSTFRISSERSFSQCAV
        MASFA RAI RSSSGKA  LLS GARA  ARS FRI+S+R FSQC+V
Subjt:  MASFAARAILRSSSGKATALLSAGARAGSARSTFRISSERSFSQCAV

XP_038887457.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X3 [Benincasa hispida]1.0e-0574.47Show/hide
Query:  MASFAARAILRSSSGKATALLSAGARAGSARSTFRISSERSFSQCAV
        MASFA RAI RSSSGKA  LLS GARA  ARS FRI+S+R FSQC+V
Subjt:  MASFAARAILRSSSGKATALLSAGARAGSARSTFRISSERSFSQCAV

TrEMBL top hitse value%identityAlignment
A0A5D3CTR8 Protein NUCLEAR FUSION DEFECTIVE 69.3e-0579.07Show/hide
Query:  MASFAARAILRSSSGKATALLSAGARAGSARSTFRISSERSFS
        MASFAARAI RSSSGKA  LLSAGARA  ARS FRI+S+R FS
Subjt:  MASFAARAILRSSSGKATALLSAGARAGSARSTFRISSERSFS

A0A6J1GM36 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.9e-0572.34Show/hide
Query:  MASFAARAILRSSSGKATALLSAGARAGSARSTFRISSERSFSQCAV
        MASFAARAI RSS GKA  LLS G+RA  ARS+FRI+++R FSQCAV
Subjt:  MASFAARAILRSSSGKATALLSAGARAGSARSTFRISSERSFSQCAV

A0A6J1GM60 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X21.9e-0572.34Show/hide
Query:  MASFAARAILRSSSGKATALLSAGARAGSARSTFRISSERSFSQCAV
        MASFAARAI RSS GKA  LLS G+RA  ARS+FRI+++R FSQCAV
Subjt:  MASFAARAILRSSSGKATALLSAGARAGSARSTFRISSERSFSQCAV

A0A6J1HZK6 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X21.9e-0572.34Show/hide
Query:  MASFAARAILRSSSGKATALLSAGARAGSARSTFRISSERSFSQCAV
        MASFAARAI RSS G+A  LLS G+RA  ARS+FRI+S+R FSQCAV
Subjt:  MASFAARAILRSSSGKATALLSAGARAGSARSTFRISSERSFSQCAV

A0A6J1I278 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.9e-0572.34Show/hide
Query:  MASFAARAILRSSSGKATALLSAGARAGSARSTFRISSERSFSQCAV
        MASFAARAI RSS G+A  LLS G+RA  ARS+FRI+S+R FSQCAV
Subjt:  MASFAARAILRSSSGKATALLSAGARAGSARSTFRISSERSFSQCAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTTCGCTGCTAGGGCCATTTTGCGATCCTCCTCCGGCAAGGCTACGGCTCTTCTGAGTGCCGGAGCCAGAGCGGGCTCGGCTCGTTCAACATTTCGCATTTC
TTCCGAACGATCTTTCTCTCAGTGTGCTGTATGTAAGAATGCAGGAAGAGTACTTGTTCTTCTACAAGAAACATGA
mRNA sequenceShow/hide mRNA sequence
TATTGAAATTTTATAATAAACTAATTTAATCTTAAAAAGAAAAAGAAAAAAAAAAAAAAAAAGGGAAAGAAATGAAAACACCCAAATTTCTCGGGACGCGGCGGCTGGGT
TGGACAATGAATGCCCCCAGTCCAAGACGGGAGCTCTGTTCGTTGTGGCTTGCACAGAACTTCTCGCCGCATTCTCATGTTTGCCGATGGCTTCCTTCGCTGCTAGGGCC
ATTTTGCGATCCTCCTCCGGCAAGGCTACGGCTCTTCTGAGTGCCGGAGCCAGAGCGGGCTCGGCTCGTTCAACATTTCGCATTTCTTCCGAACGATCTTTCTCTCAGTG
TGCTGTATGTAAGAATGCAGGAAGAGTACTTGTTCTTCTACAAGAAACATGA
Protein sequenceShow/hide protein sequence
MASFAARAILRSSSGKATALLSAGARAGSARSTFRISSERSFSQCAVCKNAGRVLVLLQET