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Carg18049 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18049
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionauxilin-related protein 2-like isoform X2
Genome locationCarg_Chr11:11965142..11967099
RNA-Seq ExpressionCarg18049
SyntenyCarg18049
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589135.1 DDB1- and CUL4-associated factor 13, partial [Cucurbita argyrosperma subsp. sororia]3.0e-31100Show/hide
Query:  MKSREEKRTANSHVIEIGSDNRVGRNKAVTLDEVIAWAKEDQLVLSLRPKSDARSIPGHRRKREQNRKKFLISSR
        MKSREEKRTANSHVIEIGSDNRVGRNKAVTLDEVIAWAKEDQLVLSLRPKSDARSIPGHRRKREQNRKKFLISSR
Subjt:  MKSREEKRTANSHVIEIGSDNRVGRNKAVTLDEVIAWAKEDQLVLSLRPKSDARSIPGHRRKREQNRKKFLISSR

KAG6600651.1 hypothetical protein SDJN03_05884, partial [Cucurbita argyrosperma subsp. sororia]5.4e-0973.47Show/hide
Query:  MKSREEKRTANSHVIEIGSDNRVGRNKAVTLDEVIAWAKEDQLVLSLRP
        MK REE+RT NS++IEIGSDNR G+NKAV  D VIA  KE+QLVLSLRP
Subjt:  MKSREEKRTANSHVIEIGSDNRVGRNKAVTLDEVIAWAKEDQLVLSLRP

KAG7022833.1 hypothetical protein SDJN02_16569, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-31100Show/hide
Query:  MKSREEKRTANSHVIEIGSDNRVGRNKAVTLDEVIAWAKEDQLVLSLRPKSDARSIPGHRRKREQNRKKFLISSR
        MKSREEKRTANSHVIEIGSDNRVGRNKAVTLDEVIAWAKEDQLVLSLRPKSDARSIPGHRRKREQNRKKFLISSR
Subjt:  MKSREEKRTANSHVIEIGSDNRVGRNKAVTLDEVIAWAKEDQLVLSLRPKSDARSIPGHRRKREQNRKKFLISSR

XP_022977821.1 uncharacterized protein LOC111478006 isoform X1 [Cucurbita maxima]3.5e-0868.75Show/hide
Query:  MKSREEKRTANSHVIEIGSDNRVGRNKAVTLDEVIAWAKEDQLVLSLR
        +K+REE++T NS VIEIG+DN  G+N+ V LDEVIAWAKE Q VLSLR
Subjt:  MKSREEKRTANSHVIEIGSDNRVGRNKAVTLDEVIAWAKEDQLVLSLR

XP_022977832.1 uncharacterized protein LOC111478006 isoform X2 [Cucurbita maxima]3.5e-0868.75Show/hide
Query:  MKSREEKRTANSHVIEIGSDNRVGRNKAVTLDEVIAWAKEDQLVLSLR
        +K+REE++T NS VIEIG+DN  G+N+ V LDEVIAWAKE Q VLSLR
Subjt:  MKSREEKRTANSHVIEIGSDNRVGRNKAVTLDEVIAWAKEDQLVLSLR

TrEMBL top hitse value%identityAlignment
A0A6J1EDE7 putative tyrosine-protein phosphatase auxilin isoform X19.7e-0468.42Show/hide
Query:  SREEKRTANSHVIEIGSDNRVGRNKAVTLDEVIAWAKE
        S EE    +S+VIEIGSDNR G N+AV L+EVIAWAKE
Subjt:  SREEKRTANSHVIEIGSDNRVGRNKAVTLDEVIAWAKE

A0A6J1IJU2 putative tyrosine-protein phosphatase auxilin isoform X22.5e-0471.05Show/hide
Query:  SREEKRTANSHVIEIGSDNRVGRNKAVTLDEVIAWAKE
        S EE    +S+VIEIGSDNR G N+AV LDEVIAWAKE
Subjt:  SREEKRTANSHVIEIGSDNRVGRNKAVTLDEVIAWAKE

A0A6J1IL14 uncharacterized protein LOC111478006 isoform X11.7e-0868.75Show/hide
Query:  MKSREEKRTANSHVIEIGSDNRVGRNKAVTLDEVIAWAKEDQLVLSLR
        +K+REE++T NS VIEIG+DN  G+N+ V LDEVIAWAKE Q VLSLR
Subjt:  MKSREEKRTANSHVIEIGSDNRVGRNKAVTLDEVIAWAKEDQLVLSLR

A0A6J1IM87 putative tyrosine-protein phosphatase auxilin isoform X12.5e-0471.05Show/hide
Query:  SREEKRTANSHVIEIGSDNRVGRNKAVTLDEVIAWAKE
        S EE    +S+VIEIGSDNR G N+AV LDEVIAWAKE
Subjt:  SREEKRTANSHVIEIGSDNRVGRNKAVTLDEVIAWAKE

A0A6J1ING1 uncharacterized protein LOC111478006 isoform X21.7e-0868.75Show/hide
Query:  MKSREEKRTANSHVIEIGSDNRVGRNKAVTLDEVIAWAKEDQLVLSLR
        +K+REE++T NS VIEIG+DN  G+N+ V LDEVIAWAKE Q VLSLR
Subjt:  MKSREEKRTANSHVIEIGSDNRVGRNKAVTLDEVIAWAKEDQLVLSLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGTAGAGAAGAGAAGAGAACGGCGAACTCTCATGTCATTGAGATTGGTTCCGATAACAGAGTGGGGAGGAACAAAGCAGTTACTCTTGATGAAGTGATTGCTTG
GGCAAAAGAAGACCAGTTGGTCCTGTCATTGAGGCCGAAGTCAGACGCTCGATCAATACCAGGCCATCGGAGGAAGAGAGAGCAGAATCGAAAGAAGTTTCTCATCTCGT
CCCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAGTAGAGAAGAGAAGAGAACGGCGAACTCTCATGTCATTGAGATTGGTTCCGATAACAGAGTGGGGAGGAACAAAGCAGTTACTCTTGATGAAGTGATTGCTTG
GGCAAAAGAAGACCAGTTGGTCCTGTCATTGAGGCCGAAGTCAGACGCTCGATCAATACCAGGCCATCGGAGGAAGAGAGAGCAGAATCGAAAGAAGTTTCTCATCTCGT
CCCGGTGATGAAAAACAGAGAAGAGAAGAGAACGACGAACTCTTATGTCATTGAGATTGGTTCCGATAACAGAGTGGGGAAGAACAAAGCAGTTGGTCCTGTCAATTCAG
CCCGGTGGGATTTTCGCATCTGCTAGGAATACTGGGTCATGATGATGAACCATATGAGATATATACTAGTGCCTGGATCAATTTTTGAGACTGATTTGAGTCTTGGGTAA
TGATGGCAATCAATTTGTTGAAATCGAAGGACGGTCCGGTTCATGTAAAGTTTGTTGTAAACAATTAGGGATCCATGAAATATAACCACACAACCCACTAAGATAGAAAT
CGAGGACATAGATGAAGATAATGAAGTTGAGGTCAAGGAATCAAACTCTGATTGCTACGTTCAACACTCCATCACGTAAGAAATTTTCTATTTGACATCATAAACTACCT
TATGTGTTGCCTAGATCTCACAATAATTACGTTATTGGCAACGTTGTG
Protein sequenceShow/hide protein sequence
MKSREEKRTANSHVIEIGSDNRVGRNKAVTLDEVIAWAKEDQLVLSLRPKSDARSIPGHRRKREQNRKKFLISSR