; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg18055 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18055
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionglycine-rich protein-like
Genome locationCarg_Chr11:11907447..11908204
RNA-Seq ExpressionCarg18055
SyntenyCarg18055
Gene Ontology termsNA
InterPro domainsIPR010800 - Glycine rich protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589125.1 Glycine-rich protein, partial [Cucurbita argyrosperma subsp. sororia]3.6e-4898Show/hide
Query:  MSSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
        MSSKAFVFLGLLFAFVLLISSNVAAS+L HTSVKTENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
Subjt:  MSSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP

KAG7022827.1 Glycine-rich protein [Cucurbita argyrosperma subsp. argyrosperma]1.1e-49100Show/hide
Query:  MSSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
        MSSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
Subjt:  MSSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP

XP_022930747.1 glycine-rich protein DC7.1-like [Cucurbita moschata]1.0e-4797Show/hide
Query:  MSSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
        MSSKAFVFLGLLFAFVLLISSNVAASDL HTS K ENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
Subjt:  MSSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP

XP_022989494.1 glycine-rich protein DC7.1-like [Cucurbita maxima]3.6e-4898Show/hide
Query:  MSSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
        MSSKAFVFLGLLFAFVLLISSNVAASDL HTSVK ENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
Subjt:  MSSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP

XP_023529825.1 glycine-rich protein DC7.1-like [Cucurbita pepo subsp. pepo]9.3e-4999Show/hide
Query:  MSSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
        MSSKAFVFLGLLFAFVLLISSNVAASDL HTSVKTENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
Subjt:  MSSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP

TrEMBL top hitse value%identityAlignment
A0A5D3DE59 Cold and drought-regulated protein CORA-like1.4e-2665.25Show/hide
Query:  MSSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATMETNGVEDAKY-GGYDRGYRRGRYDHGGH--DGHGHGGY---------------RCRHGW
        MSSKAFVFLGLL AFVLL+SS VAA DL  TS KT+N AT+ETNGVEDAKY GGYDRGY  G Y  GG+   G+G GGY                CR+G 
Subjt:  MSSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATMETNGVEDAKY-GGYDRGYRRGRYDHGGH--DGHGHGGY---------------RCRHGW

Query:  CRYRCCSYAGEVVEGAKP
        C YRCCSYAGEVVEGAKP
Subjt:  CRYRCCSYAGEVVEGAKP

A0A6J1ERH4 glycine-rich protein DC7.1-like5.0e-4897Show/hide
Query:  MSSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
        MSSKAFVFLGLLFAFVLLISSNVAASDL HTS K ENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
Subjt:  MSSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP

A0A6J1GKL6 glycine-rich protein-like isoform X22.4e-2669.44Show/hide
Query:  MSSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATMETNGVEDAKYGGYDRGY-----RRGRYDHGGHDGHGHG---GYRCRHGWCRYRCCSYAG
        MSSKAF+FLGLLFA VLLISS VAA DL  TS K EN AT ETNGVEDAKYGGYD GY       GR  +GG  G+G G   G  CR+G C YRCCSYAG
Subjt:  MSSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATMETNGVEDAKYGGYDRGY-----RRGRYDHGGHDGHGHG---GYRCRHGWCRYRCCSYAG

Query:  EVVEGAKP
        EVVEGAKP
Subjt:  EVVEGAKP

A0A6J1GM55 cold and drought-regulated protein CORA-like isoform X15.4e-2664.71Show/hide
Query:  MSSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATMETNGVEDAKYGGYDRGY-RRGRYDHGGHDGH----------GHGGY--------RCRHG
        MSSKAF+FLGLLFA VLLISS VAA DL  TS K EN AT ETNGVEDAKYGGYD GY  RG Y  GG+ G           G GGY         CR+G
Subjt:  MSSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATMETNGVEDAKYGGYDRGY-RRGRYDHGGHDGH----------GHGGY--------RCRHG

Query:  WCRYRCCSYAGEVVEGAKP
         C YRCCSYAGEVVEGAKP
Subjt:  WCRYRCCSYAGEVVEGAKP

A0A6J1JPH5 glycine-rich protein DC7.1-like1.7e-4898Show/hide
Query:  MSSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
        MSSKAFVFLGLLFAFVLLISSNVAASDL HTSVK ENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
Subjt:  MSSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP

SwissProt top hitse value%identityAlignment
P23137 Glycine-rich protein9.8e-0946.23Show/hide
Query:  MSSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATME-TNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYR---CRHGWCR------YRCCSY
        M SKAF+FLGL  AF  LISS V A +L  TS    N   ++  NGV+    GGY+     G Y  GG  G G GGY+   CR+G CR       RCCSY
Subjt:  MSSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATME-TNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYR---CRHGWCR------YRCCSY

Query:  AGEVVE
        AGE ++
Subjt:  AGEVVE

P37704 Glycine-rich protein DC7.16.0e-0645.16Show/hide
Query:  MSSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATMETNGVEDAKYGGYDRGYRRGRYDHGG--HDGHGHGGYRCRHGWCRYRCCSYA
        M SK F+ LGL  AF LLISS VAA DL  T        T E   ++   +GG   G+  G   HGG  H G GHGG  C H +C   CCS A
Subjt:  MSSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATMETNGVEDAKYGGYDRGYRRGRYDHGG--HDGHGHGGYRCRHGWCRYRCCSYA

Q07202 Cold and drought-regulated protein CORA3.0e-0546.15Show/hide
Query:  SSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATMETNGVEDAKYGG---YDRGYRRGRYDHGGHDGHGHGGY
        S KA + L LL   + LISS ++A DL  TS   +     +TN V DAKYGG   +  GY  G Y+HGG   HG GGY
Subjt:  SSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATMETNGVEDAKYGG---YDRGYRRGRYDHGGHDGHGHGGY

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTCCAAGGCTTTTGTTTTCCTCGGCCTTCTTTTCGCCTTTGTTCTCCTCATCTCTTCGAACGTGGCTGCGAGCGACCTCCCACACACCTCGGTCAAGACCGAAAA
TGTGGCTACAATGGAGACCAATGGCGTAGAGGATGCCAAGTATGGAGGATATGATAGGGGCTACCGTCGTGGTCGCTACGACCATGGCGGCCATGATGGGCACGGTCATG
GTGGCTACCGTTGCAGGCATGGTTGGTGCCGCTACCGGTGCTGCAGCTACGCCGGTGAAGTGGTGGAGGGTGCAAAGCCATAA
mRNA sequenceShow/hide mRNA sequence
CATCCCATCTCAAAAAATCGATCTTTACTACACACAAAAAAAAATGAGCTCCAAGGCTTTTGTTTTCCTCGGCCTTCTTTTCGCCTTTGTTCTCCTCATCTCTTCGAACG
TGGCTGCGAGCGACCTCCCACACACCTCGGTCAAGACCGAAAATGTGGCTACAATGGAGACCAATGGCGTAGAGGATGCCAAGTATGGAGGATATGATAGGGGCTACCGT
CGTGGTCGCTACGACCATGGCGGCCATGATGGGCACGGTCATGGTGGCTACCGTTGCAGGCATGGTTGGTGCCGCTACCGGTGCTGCAGCTACGCCGGTGAAGTGGTGGA
GGGTGCAAAGCCATAAGGCATAGTGGATGTGCTGAAATAATGAAATGGTTTAATGTTTGAGAAATAAATGCATGGGGAATGGAATGCCTCGGCTGTTCTTTCTCCATGTT
TGGTTTTTAGTGTGTTTCTGTTTTGCAAATCCGATTTCTATCTCGATAACTTGAGTATAGTTCAATCGTTGAAAATATCTATCTAAGTAAGCGGTAATTAGGAGATATTT
ATTTCTTTGAAGTTCAAATGCTCTACATTTGTGGAAAAACATCATCGATTTGGCAACTTGTAGGTCCATAAAGTCCAAACTCTTCGCCCACTATGATAACAAGAAAAAAC
C
Protein sequenceShow/hide protein sequence
MSSKAFVFLGLLFAFVLLISSNVAASDLPHTSVKTENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP