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Carg18056 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18056
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionglycine-rich protein DC7.1-like
Genome locationCarg_Chr11:11903746..11904411
RNA-Seq ExpressionCarg18056
SyntenyCarg18056
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589124.1 hypothetical protein SDJN03_17689, partial [Cucurbita argyrosperma subsp. sororia]4.7e-42100Show/hide
Query:  MNSKAFIILGLLFAVVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN
        MNSKAFIILGLLFAVVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN
Subjt:  MNSKAFIILGLLFAVVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN

XP_022136255.1 glycine-rich protein DC7.1-like [Momordica charantia]7.0e-1463.27Show/hide
Query:  MNSKAFIILGLLFAVVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHH-RHHHRHRHHCRHGCSADEDV---NEDPQAKPNN
        M+SK  I LGLLFAVV+LLSSEE +ATAR LKSVEE + ETN +GIEDDKR    GHHGH HHH R  H H HHC     ADED     E+ Q KPNN
Subjt:  MNSKAFIILGLLFAVVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHH-RHHHRHRHHCRHGCSADEDV---NEDPQAKPNN

XP_022930749.1 glycine-rich protein DC7.1-like [Cucurbita moschata]1.8e-4197.87Show/hide
Query:  MNSKAFIILGLLFAVVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN
        MNSKAFIILGLLF +VILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN
Subjt:  MNSKAFIILGLLFAVVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN

XP_022989495.1 glycine-rich protein DC7.1-like [Cucurbita maxima]5.3e-3894.68Show/hide
Query:  MNSKAFIILGLLFAVVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN
        MNSKAFIILGLLFAVVILLSSEEA+ATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGH+HHHRHHHR   HCRHGCSADEDVNEDPQAKPNN
Subjt:  MNSKAFIILGLLFAVVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN

XP_023529828.1 glycine-rich protein DC7.1-like [Cucurbita pepo subsp. pepo]1.4e-4198.94Show/hide
Query:  MNSKAFIILGLLFAVVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN
        MNSKAFIILGLLFAVVILLSSEEASATARGLKSVEE VMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN
Subjt:  MNSKAFIILGLLFAVVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN

TrEMBL top hitse value%identityAlignment
A0A6J1C3E0 glycine-rich protein DC7.1-like3.4e-1463.27Show/hide
Query:  MNSKAFIILGLLFAVVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHH-RHHHRHRHHCRHGCSADEDV---NEDPQAKPNN
        M+SK  I LGLLFAVV+LLSSEE +ATAR LKSVEE + ETN +GIEDDKR    GHHGH HHH R  H H HHC     ADED     E+ Q KPNN
Subjt:  MNSKAFIILGLLFAVVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHH-RHHHRHRHHCRHGCSADEDV---NEDPQAKPNN

A0A6J1C3T3 glycine-rich protein 3 short isoform-like1.4e-0442.75Show/hide
Query:  MNSKAFIILGLLFAVVILLSSEEASATARGLKSVEEAVMETNGDGIEDDK-------------------RRFGGGHHGHRHHH------RHHHRHRHHCR
        MNSKAFI+LGLLFAVV+LLSS+    TAR LK   E VMET  DG+ED K                    R+GGG+ GH  H+      R  +    HC 
Subjt:  MNSKAFIILGLLFAVVILLSSEEASATARGLKSVEEAVMETNGDGIEDDK-------------------RRFGGGHHGHRHHH------RHHHRHRHHCR

Query:  HGCS------------ADEDVNEDPQAKPNN
        HGC             A E V+ +PQAKP+N
Subjt:  HGCS------------ADEDVNEDPQAKPNN

A0A6J1ESD5 glycine-rich protein DC7.1-like8.6e-4297.87Show/hide
Query:  MNSKAFIILGLLFAVVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN
        MNSKAFIILGLLF +VILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN
Subjt:  MNSKAFIILGLLFAVVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN

A0A6J1JMI7 glycine-rich protein DC7.1-like2.6e-3894.68Show/hide
Query:  MNSKAFIILGLLFAVVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN
        MNSKAFIILGLLFAVVILLSSEEA+ATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGH+HHHRHHHR   HCRHGCSADEDVNEDPQAKPNN
Subjt:  MNSKAFIILGLLFAVVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCTAAAGCTTTCATCATCCTCGGTCTCCTTTTCGCCGTTGTCATCCTCCTCTCCTCGGAGGAGGCTTCAGCTACCGCAAGAGGTCTAAAGAGCGTTGAAGAAGC
CGTGATGGAGACTAACGGAGATGGAATCGAGGATGACAAGCGTCGTTTCGGGGGAGGCCACCATGGGCACAGACATCACCACAGGCACCACCACAGGCACCGCCACCATT
GTCGTCACGGTTGCTCGGCTGATGAGGATGTTAATGAAGATCCACAAGCCAAGCCTAACAATTGA
mRNA sequenceShow/hide mRNA sequence
TCATCTCTTCTACAACTTTCTCTATATTTCTTTAGCTCGAGCGTTTGCAATGAATTCTAAAGCTTTCATCATCCTCGGTCTCCTTTTCGCCGTTGTCATCCTCCTCTCCT
CGGAGGAGGCTTCAGCTACCGCAAGAGGTCTAAAGAGCGTTGAAGAAGCCGTGATGGAGACTAACGGAGATGGAATCGAGGATGACAAGCGTCGTTTCGGGGGAGGCCAC
CATGGGCACAGACATCACCACAGGCACCACCACAGGCACCGCCACCATTGTCGTCACGGTTGCTCGGCTGATGAGGATGTTAATGAAGATCCACAAGCCAAGCCTAACAA
TTGAAAATGGTGTTGGTTCAAGTCAATGTTATAGTGATTGTGTAAGTTATGAATAAATGCATTATTATGCTTGAGTTGGTAAGGCTTGTTCGTGTCCATGTAAGCTTGCC
CAAGTACAAGGGCATTAGTTAATCTCTAATAAAGAGATTAATTGTGTGTATTTTGAGCTTTATTGTATAAGTTAATTAAATAATCATGTGAAATATTGTTCCTAATAATT
TCTTTCTTCTAATTCTAACACTTTTTTATATTC
Protein sequenceShow/hide protein sequence
MNSKAFIILGLLFAVVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN