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Carg18060 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18060
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtochlorophyllide reductase
Genome locationCarg_Chr11:11874777..11875586
RNA-Seq ExpressionCarg18060
SyntenyCarg18060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572248.1 hypothetical protein SDJN03_28976, partial [Cucurbita argyrosperma subsp. sororia]8.3e-3680.2Show/hide
Query:  MWRLAAAVRSKLHNIRKSPRVADESMFS-GGGVDGGGRVVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLMGSV
        MWRLAAAVR  LHNIRKSPRVADESM+S GGG DGGGRV+D G RR+ NS+G S+IY +LRTPFS LSCFS PHVNGVDGMWVSGEF RISEVNHLM S 
Subjt:  MWRLAAAVRSKLHNIRKSPRVADESMFS-GGGVDGGGRVVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLMGSV

Query:  S
        S
Subjt:  S
KAG6589118.1 hypothetical protein SDJN03_17683, partial [Cucurbita argyrosperma subsp. sororia]5.6e-4898Show/hide
Query:  MWRLAAAVRSKLHNIRKSPRVADESMFSGGGVDGGGRVVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLMGSVS
        MWRLAAAVRSKLHNIRKSPRVADESMFSGGGVDGGGRVVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLM S S
Subjt:  MWRLAAAVRSKLHNIRKSPRVADESMFSGGGVDGGGRVVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLMGSVS
KAG7022822.1 hypothetical protein SDJN02_16558, partial [Cucurbita argyrosperma subsp. argyrosperma]7.5e-61100Show/hide
Query:  MWRLAAAVRSKLHNIRKSPRVADESMFSGGGVDGGGRVVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLMGSVS
        MWRLAAAVRSKLHNIRKSPRVADESMFSGGGVDGGGRVVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLMGSVS
Subjt:  MWRLAAAVRSKLHNIRKSPRVADESMFSGGGVDGGGRVVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLMGSVS

Query:  DWNVTSDSISVSNLATVTLG
        DWNVTSDSISVSNLATVTLG
Subjt:  DWNVTSDSISVSNLATVTLG
XP_022930627.1 uncharacterized protein LOC111437033 [Cucurbita moschata]4.7e-4797Show/hide
Query:  MWRLAAAVRSKLHNIRKSPRVADESMFSGGGVDGGGRVVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLMGSVS
        MWRLAAAVRSKLHNIRKSPRVADESMFSGGGVDGGGRVVDGG RRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLM S S
Subjt:  MWRLAAAVRSKLHNIRKSPRVADESMFSGGGVDGGGRVVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLMGSVS
XP_023530311.1 uncharacterized protein LOC111792917 [Cucurbita pepo subsp. pepo]1.2e-4597.94Show/hide
Query:  MWRLAAAVRSKLHNIRK-SPRVADESMFSGGGVDGGGRVVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLM
        MWRLAAAVRSKLHNIRK SPRVADESMFSGGGVDGGGRVVDGG RRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLM
Subjt:  MWRLAAAVRSKLHNIRK-SPRVADESMFSGGGVDGGGRVVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLM
TrEMBL top hitse value%identityAlignment
A0A1S3C134 uncharacterized protein LOC1034956673.4e-3580.2Show/hide
Query:  MWRLAAAVRSKLHNIRKSPRVADESMFSGGGVDGGGR---VVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLMG
        MWRLAAAVR  LHNIRKSPRVADESM+ GGGVDGGGR   VV  G RRE NS+G S+IY++LRTPFS LSCFS PHVNGVDGMWVSGEF RISEVNHLM 
Subjt:  MWRLAAAVRSKLHNIRKSPRVADESMFSGGGVDGGGR---VVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLMG

Query:  S
        S
Subjt:  S
A0A5D3BTM8 Uncharacterized protein4.5e-3579.61Show/hide
Query:  MWRLAAAVRSKLHNIRKSPRVADESMFSGGGVDGGGR---VVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLMG
        MWRLAAAVR  LHNIRKSPRVADESM+ GGGVDGGGR   VV  G RRE NS+G S+IY++LRTPFS LSCFS PHVNGVDGMWVSGEF RISEVNHLM 
Subjt:  MWRLAAAVRSKLHNIRKSPRVADESMFSGGGVDGGGR---VVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLMG

Query:  SVS
        S S
Subjt:  SVS
A0A6J1C6U0 uncharacterized protein LOC1110079086.0e-3274Show/hide
Query:  MWRLAAAVRSKLHNIRKSPRVADESMFSGGGVDGGGRVVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLMGSVS
        MWRLAA +R  LHNIRKSPRVADESM+ GGG DGGG +V    RR  NS+G S+IY+VLRTPFS L CFS PHVNG DG+WVSGEFARISEVNHLM S S
Subjt:  MWRLAAAVRSKLHNIRKSPRVADESMFSGGGVDGGGRVVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLMGSVS
A0A6J1ER34 uncharacterized protein LOC1114370332.3e-4797Show/hide
Query:  MWRLAAAVRSKLHNIRKSPRVADESMFSGGGVDGGGRVVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLMGSVS
        MWRLAAAVRSKLHNIRKSPRVADESMFSGGGVDGGGRVVDGG RRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLM S S
Subjt:  MWRLAAAVRSKLHNIRKSPRVADESMFSGGGVDGGGRVVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLMGSVS
A0A6J1HZK3 uncharacterized protein LOC1114683524.5e-3579.21Show/hide
Query:  MWRLAAAVRSKLHNIRKSPRVADESMFS-GGGVDGGGRVVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLMGSV
        MWRLAAAVR  LHNIRKSPRVADESM+S GGG DGG  V+D G RRE NS+G S+IY +LRTPFS LSCFS PHVNGVDGMWVSGEF RISEVNHLM S 
Subjt:  MWRLAAAVRSKLHNIRKSPRVADESMFS-GGGVDGGGRVVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLMGSV

Query:  S
        S
Subjt:  S
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04795.1 unknown protein1.7e-1543.75Show/hide
Query:  MWRLAAAVRSKLHNIRKSPRVADESMFSGGGVDGGGRVVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLM
        M ++ + +R  L N+RKSPRVADES      V+G     D GG    N         +++ P S +SCFS P V+  DG+WVSG++ R+SEVNHLM
Subjt:  MWRLAAAVRSKLHNIRKSPRVADESMFSGGGVDGGGRVVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLM
AT5G35732.1 unknown protein3.5e-1645Show/hide
Query:  MWRLAAAVRSKLHNIRKSPRVADESMFSGGGVDGGGRVVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLMGSVS
        M ++ + +R  L N+RKSPRVAD++         G  VV  G R   NS        ++R PFS +SCF+ P V+G DG+WVSG++  ISEVNHLM S S
Subjt:  MWRLAAAVRSKLHNIRKSPRVADESMFSGGGVDGGGRVVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLMGSVS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCGGTTGGCGGCGGCAGTGAGAAGTAAACTCCACAACATAAGGAAGAGCCCACGAGTGGCTGATGAAAGCATGTTCAGCGGCGGTGGAGTCGACGGCGGCGGAAG
GGTGGTCGACGGCGGCGGCCGTAGAGAGAGAAATTCACATGGGGTTTCGATAATTTACAATGTTCTTCGAACCCCATTTTCGTTTCTTTCTTGCTTCTCTCACCCACATG
TTAATGGCGTCGACGGGATGTGGGTCTCCGGCGAGTTCGCCAGAATATCTGAAGTGAATCATCTTATGGGATCTGTATCGGATTGGAATGTCACCTCTGATTCTATTTCG
GTATCCAATCTCGCTACTGTGACGCTCGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGCGGTTGGCGGCGGCAGTGAGAAGTAAACTCCACAACATAAGGAAGAGCCCACGAGTGGCTGATGAAAGCATGTTCAGCGGCGGTGGAGTCGACGGCGGCGGAAG
GGTGGTCGACGGCGGCGGCCGTAGAGAGAGAAATTCACATGGGGTTTCGATAATTTACAATGTTCTTCGAACCCCATTTTCGTTTCTTTCTTGCTTCTCTCACCCACATG
TTAATGGCGTCGACGGGATGTGGGTCTCCGGCGAGTTCGCCAGAATATCTGAAGTGAATCATCTTATGGGATCTGTATCGGATTGGAATGTCACCTCTGATTCTATTTCG
GTATCCAATCTCGCTACTGTGACGCTCGGTTGA
Protein sequenceShow/hide protein sequence
MWRLAAAVRSKLHNIRKSPRVADESMFSGGGVDGGGRVVDGGGRRERNSHGVSIIYNVLRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLMGSVSDWNVTSDSIS
VSNLATVTLG