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Carg18077 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18077
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr11:11777630..11780785
RNA-Seq ExpressionCarg18077
SyntenyCarg18077
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022805.1 hypothetical protein SDJN02_16541, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-144100Show/hide
Query:  NQLDGALGTLGVRTQGLKHRTSYGETSSKRELLVSCHKQSQAPLPQNHIRRILELPFLRGSIQEQHNPLCLQLLHVGGLHKSFFQGPTLSQGRNLLDEHG
        NQLDGALGTLGVRTQGLKHRTSYGETSSKRELLVSCHKQSQAPLPQNHIRRILELPFLRGSIQEQHNPLCLQLLHVGGLHKSFFQGPTLSQGRNLLDEHG
Subjt:  NQLDGALGTLGVRTQGLKHRTSYGETSSKRELLVSCHKQSQAPLPQNHIRRILELPFLRGSIQEQHNPLCLQLLHVGGLHKSFFQGPTLSQGRNLLDEHG

Query:  SRNQMFQIQHPFQDTVQLNFRAACGSRKSNTDMVVVGVEILLLSIEFNGYNLVGAAAIGSCIGEAHPLPPALIRQNEAQGSVGCSQLQRAIPHKPQEQQP
        SRNQMFQIQHPFQDTVQLNFRAACGSRKSNTDMVVVGVEILLLSIEFNGYNLVGAAAIGSCIGEAHPLPPALIRQNEAQGSVGCSQLQRAIPHKPQEQQP
Subjt:  SRNQMFQIQHPFQDTVQLNFRAACGSRKSNTDMVVVGVEILLLSIEFNGYNLVGAAAIGSCIGEAHPLPPALIRQNEAQGSVGCSQLQRAIPHKPQEQQP

Query:  RYWNLSYTESFSLTNSSTNSEFSQENQNIQMNSRLCRSAMRISNPDRDLSSSFVKLFEKKLE
        RYWNLSYTESFSLTNSSTNSEFSQENQNIQMNSRLCRSAMRISNPDRDLSSSFVKLFEKKLE
Subjt:  RYWNLSYTESFSLTNSSTNSEFSQENQNIQMNSRLCRSAMRISNPDRDLSSSFVKLFEKKLE
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATCAACTTGATGGAGCTCTCGGGACGTTGGGAGTTCGAACCCAGGGACTGAAGCACAGGACCAGCTATGGTGAAACTTCATCAAAAAGAGAGCTCCTGGTCTCCTGCCA
CAAACAATCTCAAGCACCACTGCCCCAAAACCATATACGTCGGATTCTGGAGTTGCCCTTCCTTCGTGGAAGCATTCAGGAGCAACATAACCCATTGTGCCTGCAACTCC
TCCATGTTGGAGGTCTGCATAAGAGTTTCTTTCAGGGTCCAACGCTCTCGCAAGGCCGAAATCTCCTAGACGAGCATGGAAGTCGGAATCAAATGTTCCAAATCCAGCAT
CCATTCCAAGACACAGTTCAACTGAATTTCCGGGCTGCCTGTGGAAGCAGAAAATCCAATACCGATATGGTTGTCGTCGGGGTCGAAATCCTGCTTCTGAGTATCGAATT
CAATGGCTACAATTTGGTTGGTGCTGCTGCCATCGGTAGTTGCATTGGTGAGGCCCATCCACTGCCCCCAGCTCTGATCAGGCAAAACGAGGCTCAAGGCTCGGTTGGCT
GCTCACAGCTCCAAAGAGCAATACCACACAAGCCACAAGAACAGCAACCAAGGTACTGGAATCTCTCTTACACAGAATCATTTTCCTTGACAAATTCGTCAACTAACTCA
GAATTCTCACAGGAAAACCAGAACATACAGATGAATTCCAGGCTCTGTAGATCAGCAATGAGAATCTCGAATCCAGATCGAGATCTAAGTTCTTCCTTTGTGAAACTGTT
TGAGAAAAAGCTAGAG
mRNA sequenceShow/hide mRNA sequence
AATCAACTTGATGGAGCTCTCGGGACGTTGGGAGTTCGAACCCAGGGACTGAAGCACAGGACCAGCTATGGTGAAACTTCATCAAAAAGAGAGCTCCTGGTCTCCTGCCA
CAAACAATCTCAAGCACCACTGCCCCAAAACCATATACGTCGGATTCTGGAGTTGCCCTTCCTTCGTGGAAGCATTCAGGAGCAACATAACCCATTGTGCCTGCAACTCC
TCCATGTTGGAGGTCTGCATAAGAGTTTCTTTCAGGGTCCAACGCTCTCGCAAGGCCGAAATCTCCTAGACGAGCATGGAAGTCGGAATCAAATGTTCCAAATCCAGCAT
CCATTCCAAGACACAGTTCAACTGAATTTCCGGGCTGCCTGTGGAAGCAGAAAATCCAATACCGATATGGTTGTCGTCGGGGTCGAAATCCTGCTTCTGAGTATCGAATT
CAATGGCTACAATTTGGTTGGTGCTGCTGCCATCGGTAGTTGCATTGGTGAGGCCCATCCACTGCCCCCAGCTCTGATCAGGCAAAACGAGGCTCAAGGCTCGGTTGGCT
GCTCACAGCTCCAAAGAGCAATACCACACAAGCCACAAGAACAGCAACCAAGGTACTGGAATCTCTCTTACACAGAATCATTTTCCTTGACAAATTCGTCAACTAACTCA
GAATTCTCACAGGAAAACCAGAACATACAGATGAATTCCAGGCTCTGTAGATCAGCAATGAGAATCTCGAATCCAGATCGAGATCTAAGTTCTTCCTTTGTGAAACTGTT
TGAGAAAAAGCTAGAG
Protein sequenceShow/hide protein sequence
NQLDGALGTLGVRTQGLKHRTSYGETSSKRELLVSCHKQSQAPLPQNHIRRILELPFLRGSIQEQHNPLCLQLLHVGGLHKSFFQGPTLSQGRNLLDEHGSRNQMFQIQH
PFQDTVQLNFRAACGSRKSNTDMVVVGVEILLLSIEFNGYNLVGAAAIGSCIGEAHPLPPALIRQNEAQGSVGCSQLQRAIPHKPQEQQPRYWNLSYTESFSLTNSSTNS
EFSQENQNIQMNSRLCRSAMRISNPDRDLSSSFVKLFEKKLE