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Carg18104 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18104
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTubulin-tyrosine ligase
Genome locationCarg_Chr11:11636641..11638998
RNA-Seq ExpressionCarg18104
SyntenyCarg18104
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589072.1 hypothetical protein SDJN03_17637, partial [Cucurbita argyrosperma subsp. sororia]3.8e-11099.5Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF
        MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKGEEIDHHREVIKNDIFEDIVNVVDLKDIITQ
        YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQE SNDDNSDNTKGEEIDHHREVIKNDIFEDIVNVVDLKDIITQ
Subjt:  YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKGEEIDHHREVIKNDIFEDIVNVVDLKDIITQ

KAG7022779.1 hypothetical protein SDJN02_16515, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-110100Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF
        MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKGEEIDHHREVIKNDIFEDIVNVVDLKDIITQ
        YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKGEEIDHHREVIKNDIFEDIVNVVDLKDIITQ
Subjt:  YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKGEEIDHHREVIKNDIFEDIVNVVDLKDIITQ

XP_022928482.1 uncharacterized protein LOC111435277 [Cucurbita moschata]4.2e-10998.99Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF
        MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVIN DEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKGEEIDHHREVIKNDIFEDIVNVVDLKDIITQ
        YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTK EEIDHHREVIKNDIFEDIVNVVDLKDIITQ
Subjt:  YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKGEEIDHHREVIKNDIFEDIVNVVDLKDIITQ

XP_022989470.1 uncharacterized protein LOC111486519 isoform X1 [Cucurbita maxima]1.5e-10392.61Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF
        MDEYLKQSKRKLVMWFT+TFKPIMTHDELEPIMATLGF+GLEPVINRDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPR+DGLHIYTYRAFLDAINF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHIRGLPLS----QNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKGEEIDHHREVIKNDIFEDIVNVVDLKDI
        YLQKYNISDVFHIRGLPLS    QNQDQNRNWCRMY ENIHYAYIEGTLDRTTIDLYE QE +NDDNSD+TK E+IDHH+EVIKNDIFEDIVNVVDLKDI
Subjt:  YLQKYNISDVFHIRGLPLS----QNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKGEEIDHHREVIKNDIFEDIVNVVDLKDI

Query:  ITQ
        ITQ
Subjt:  ITQ

XP_023529793.1 uncharacterized protein LOC111792510 [Cucurbita pepo subsp. pepo]4.7e-10897.49Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF
        MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKS+STTERPP+PRLPYPRVDGLHIYTYRAFLDAINF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKGEEIDHHREVIKNDIFEDIVNVVDLKDIITQ
        YLQKYNISDVFH+RGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTK EEIDH REVIKNDIFEDIVNVVDLKDIITQ
Subjt:  YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKGEEIDHHREVIKNDIFEDIVNVVDLKDIITQ

TrEMBL top hitse value%identityAlignment
A0A0A0K4Z6 Uncharacterized protein8.1e-5857.35Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF
        M++ L++S RKL +WFT+TFKPIMTHDELEPIMATLGFI LEP +N   ISWKSY YS A    KS+S +  PP PRLPYPR+DGLHIYTYRAFLDA+NF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDN------SDNTKGEEIDHHREVIKNDIFEDIVNVVDLK
        YL+K++ISD+FHIRGLPL +N D+NR W RM  E  ++ Y EGTLD+TT+ LY F + +N +N         T  EE +    + ++   ED + +V LK
Subjt:  YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDN------SDNTKGEEIDHHREVIKNDIFEDIVNVVDLK

Query:  DIIT
        D+IT
Subjt:  DIIT

A0A6J1C2J2 uncharacterized protein LOC1110076744.6e-6158.25Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSMS-TTERPPIPRLPYPRVDGLHIYTYRAFLDAIN
        M++ L++S RKL +W+T+TFKPIMTH+ELEPIMATLGF+GLEP +N   ISWKSY YS A    KS++   E PP PRLP+PR+DGLHIYTYRAFLDA+N
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSMS-TTERPPIPRLPYPRVDGLHIYTYRAFLDAIN

Query:  FYLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDN-------TKGEEIDHHREVIKNDIFEDIVNVVD
        FYL+K++ISD+FHIRGLPL +NQD+NR W RM  E  ++ Y EGTLD+TT++ Y F + +   NS+N        K E+ DH+R +I+++  EDI+ +V 
Subjt:  FYLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDN-------TKGEEIDHHREVIKNDIFEDIVNVVD

Query:  LKDIIT
        LKDIIT
Subjt:  LKDIIT

A0A6J1EK23 uncharacterized protein LOC1114352772.0e-10998.99Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF
        MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVIN DEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKGEEIDHHREVIKNDIFEDIVNVVDLKDIITQ
        YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTK EEIDHHREVIKNDIFEDIVNVVDLKDIITQ
Subjt:  YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKGEEIDHHREVIKNDIFEDIVNVVDLKDIITQ

A0A6J1JK57 uncharacterized protein LOC111486519 isoform X21.3e-5897.35Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF
        MDEYLKQSKRKLVMWFT+TFKPIMTHDELEPIMATLGF+GLEPVINRDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPR+DGLHIYTYRAFLDAINF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHI
        YLQKYNISDVFHI
Subjt:  YLQKYNISDVFHI

A0A6J1JMG4 uncharacterized protein LOC111486519 isoform X17.5e-10492.61Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF
        MDEYLKQSKRKLVMWFT+TFKPIMTHDELEPIMATLGF+GLEPVINRDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPR+DGLHIYTYRAFLDAINF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHIRGLPLS----QNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKGEEIDHHREVIKNDIFEDIVNVVDLKDI
        YLQKYNISDVFHIRGLPLS    QNQDQNRNWCRMY ENIHYAYIEGTLDRTTIDLYE QE +NDDNSD+TK E+IDHH+EVIKNDIFEDIVNVVDLKDI
Subjt:  YLQKYNISDVFHIRGLPLS----QNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKGEEIDHHREVIKNDIFEDIVNVVDLKDI

Query:  ITQ
        ITQ
Subjt:  ITQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAATACCTCAAGCAATCCAAGCGGAAATTAGTCATGTGGTTCACCAGAACCTTCAAGCCGATCATGACGCACGACGAGCTCGAACCTATTATGGCGACTCTAGG
CTTTATCGGCCTCGAACCGGTTATTAACCGCGACGAAATCTCATGGAAATCATACGTATACTCCGGCGCTCATAGCCTGATCAAGTCAATGTCGACGACGGAGCGTCCGC
CGATACCGCGATTGCCGTATCCGAGAGTCGACGGTCTTCACATTTATACGTACAGAGCATTTCTTGACGCAATCAATTTTTACCTCCAGAAATATAACATCTCCGATGTC
TTCCATATTAGAGGATTGCCACTGTCTCAAAACCAAGATCAAAATAGGAATTGGTGTCGTATGTACAATGAAAATATTCATTATGCTTACATAGAAGGAACTTTAGATCG
AACAACAATTGATCTATATGAATTTCAGGAGAAAAGTAATGATGACAATAGTGATAACACCAAGGGTGAAGAGATTGACCACCATCGAGAGGTGATAAAGAATGATATTT
TTGAAGATATCGTCAATGTTGTTGATTTGAAAGATATTATAACGCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAATACCTCAAGCAATCCAAGCGGAAATTAGTCATGTGGTTCACCAGAACCTTCAAGCCGATCATGACGCACGACGAGCTCGAACCTATTATGGCGACTCTAGG
CTTTATCGGCCTCGAACCGGTTATTAACCGCGACGAAATCTCATGGAAATCATACGTATACTCCGGCGCTCATAGCCTGATCAAGTCAATGTCGACGACGGAGCGTCCGC
CGATACCGCGATTGCCGTATCCGAGAGTCGACGGTCTTCACATTTATACGTACAGAGCATTTCTTGACGCAATCAATTTTTACCTCCAGAAATATAACATCTCCGATGTC
TTCCATATTAGAGGATTGCCACTGTCTCAAAACCAAGATCAAAATAGGAATTGGTGTCGTATGTACAATGAAAATATTCATTATGCTTACATAGAAGGAACTTTAGATCG
AACAACAATTGATCTATATGAATTTCAGGAGAAAAGTAATGATGACAATAGTGATAACACCAAGGGTGAAGAGATTGACCACCATCGAGAGGTGATAAAGAATGATATTT
TTGAAGATATCGTCAATGTTGTTGATTTGAAAGATATTATAACGCAATAA
Protein sequenceShow/hide protein sequence
MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINFYLQKYNISDV
FHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKGEEIDHHREVIKNDIFEDIVNVVDLKDIITQ