; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg18108 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18108
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr11:11618243..11618704
RNA-Seq ExpressionCarg18108
SyntenyCarg18108
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059605.1 hypothetical protein E6C27_scaffold54G00270 [Cucumis melo var. makuwa]4.1e-6483.44Show/hide
Query:  MTSIPRRSFLPTRPLNDALPVSQPD--STQTLRRRLSSISFKIQPISSPVTSW-SFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMN--
        MTSIP R FLPT PLNDALP+SQPD  S+QTLRRRLSSISFKI PISSP+TSW SF RSKSVSS+RD T  SLRKWWDWGWSWILSRK+AFARDLEMN  
Subjt:  MTSIPRRSFLPTRPLNDALPVSQPD--STQTLRRRLSSISFKIQPISSPVTSW-SFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMN--

Query:  --DEETKSLRSN--CRGS--FRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVK
          DEETK+L SN  CRGS  F+HLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVK
Subjt:  --DEETKSLRSN--CRGS--FRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVK

KAG7022775.1 hypothetical protein SDJN02_16511, partial [Cucurbita argyrosperma subsp. argyrosperma]9.8e-82100Show/hide
Query:  MTSIPRRSFLPTRPLNDALPVSQPDSTQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETK
        MTSIPRRSFLPTRPLNDALPVSQPDSTQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETK
Subjt:  MTSIPRRSFLPTRPLNDALPVSQPDSTQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETK

Query:  SLRSNCRGSFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVKS
        SLRSNCRGSFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVKS
Subjt:  SLRSNCRGSFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVKS

XP_022135907.1 uncharacterized protein LOC111007745 [Momordica charantia]7.1e-7287.58Show/hide
Query:  MTSIPRRSFLPTRPLNDALPVSQPDSTQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETK
        MT +PRRSFLPTRPLNDALPVS PDS QTLRRRLSSISFKIQPISSPVTSW F RSKSVSS+R+++G SLRKWWDWGWSWILSRKA FA+DLE+ND+ETK
Subjt:  MTSIPRRSFLPTRPLNDALPVSQPDSTQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETK

Query:  SLRSNCRGSFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVKS
        SL SNCRGS+RHLFYKVRSEFRKL+RSDRVGLPQTFKYDSVNYSKNFDDGVK+
Subjt:  SLRSNCRGSFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVKS

XP_022928235.1 uncharacterized protein LOC111435129 [Cucurbita moschata]8.3e-8198.04Show/hide
Query:  MTSIPRRSFLPTRPLNDALPVSQPDSTQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETK
        MTSIPRRSFLPTRPLNDALPVSQPDSTQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETK
Subjt:  MTSIPRRSFLPTRPLNDALPVSQPDSTQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETK

Query:  SLRSNCRGSFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVKS
        SLRSNCRGSFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDG+++
Subjt:  SLRSNCRGSFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVKS

XP_038888269.1 uncharacterized protein LOC120078122 [Benincasa hispida]2.0e-7491.5Show/hide
Query:  MTSIPRRSFLPTRPLNDALPVSQPDSTQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETK
        M SIPRRSFLPTRPLNDALPVSQPDS QT+RRRLSSISFKIQPISSPV SW F RSKSVSS+RD TG SLRKWWDWGWSWILSRKAAF RDLEMNDEETK
Subjt:  MTSIPRRSFLPTRPLNDALPVSQPDSTQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETK

Query:  SLRSNCRGSFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVKS
        +L SNCRGSFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGV+S
Subjt:  SLRSNCRGSFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVKS

TrEMBL top hitse value%identityAlignment
A0A0A0K1L8 Uncharacterized protein1.4e-6281.6Show/hide
Query:  MTSIPRRSFLPTRPLNDALPVSQPD--STQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMND--
        MTSIP R FLPT PLNDALP+SQP   STQTLRRRLSSISFKI PISSP+TSWSF RSKS+SS+RD T  SLRKWWDWGWSWILSRKAAFARDLEMND  
Subjt:  MTSIPRRSFLPTRPLNDALPVSQPD--STQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMND--

Query:  ---EETKSLRS--NCRGS--FRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVK
           E TK+L S  + RGS  F+HLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVK
Subjt:  ---EETKSLRS--NCRGS--FRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVK

A0A2I4FBL9 uncharacterized protein LOC1089972841.1e-5168.49Show/hide
Query:  RSFLPTRPLNDALPVSQPDS-TQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETKSLRSN
        RSF+P  P   ALPVSQ DS  Q LRRRLSS+S KIQPI+SP TSW+F RSKSVSS+ ++ G S+R+WWDWGWSWILSRK  FA+DLE+N+EE K L S+
Subjt:  RSFLPTRPLNDALPVSQPDS-TQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETKSLRSN

Query:  CRGSFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGV
         +GS+RH+FYKVRSE RKL+ SD VGLPQT++YDS NYS+NFDDG+
Subjt:  CRGSFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGV

A0A5A7V189 Uncharacterized protein2.0e-6483.44Show/hide
Query:  MTSIPRRSFLPTRPLNDALPVSQPD--STQTLRRRLSSISFKIQPISSPVTSW-SFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMN--
        MTSIP R FLPT PLNDALP+SQPD  S+QTLRRRLSSISFKI PISSP+TSW SF RSKSVSS+RD T  SLRKWWDWGWSWILSRK+AFARDLEMN  
Subjt:  MTSIPRRSFLPTRPLNDALPVSQPD--STQTLRRRLSSISFKIQPISSPVTSW-SFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMN--

Query:  --DEETKSLRSN--CRGS--FRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVK
          DEETK+L SN  CRGS  F+HLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVK
Subjt:  --DEETKSLRSN--CRGS--FRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVK

A0A6J1C433 uncharacterized protein LOC1110077453.4e-7287.58Show/hide
Query:  MTSIPRRSFLPTRPLNDALPVSQPDSTQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETK
        MT +PRRSFLPTRPLNDALPVS PDS QTLRRRLSSISFKIQPISSPVTSW F RSKSVSS+R+++G SLRKWWDWGWSWILSRKA FA+DLE+ND+ETK
Subjt:  MTSIPRRSFLPTRPLNDALPVSQPDSTQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETK

Query:  SLRSNCRGSFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVKS
        SL SNCRGS+RHLFYKVRSEFRKL+RSDRVGLPQTFKYDSVNYSKNFDDGVK+
Subjt:  SLRSNCRGSFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVKS

A0A6J1ER56 uncharacterized protein LOC1114351294.0e-8198.04Show/hide
Query:  MTSIPRRSFLPTRPLNDALPVSQPDSTQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETK
        MTSIPRRSFLPTRPLNDALPVSQPDSTQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETK
Subjt:  MTSIPRRSFLPTRPLNDALPVSQPDSTQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETK

Query:  SLRSNCRGSFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVKS
        SLRSNCRGSFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDG+++
Subjt:  SLRSNCRGSFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G17300.1 unknown protein1.8e-2044.8Show/hide
Query:  ALPVSQ--PDSTQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRK-AAFARDLEMNDEETK-SLRSNCRGSFRHL
        +LP+S    D    LRRRLSS+S  +        S    RSKSVS + +  G S+++WW+W WSWIL +K   F  DLE+N  ETK SL +  RGSF H+
Subjt:  ALPVSQ--PDSTQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRK-AAFARDLEMNDEETK-SLRSNCRGSFRHL

Query:  FYKVRSEFRKLIRSDRVGLPQTFKY
        F+K+RSE R+L+R     LP + K+
Subjt:  FYKVRSEFRKLIRSDRVGLPQTFKY

AT4G35320.1 unknown protein3.4e-2445.38Show/hide
Query:  ALPVSQ-PDSTQT-------LRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETKSLRSNCRGS
        +LPVSQ P++  T       +RRRLSS+S  +    + + +  F RSKSVS++ +  G S+++WW+WGWSWILSRK  F RDLE+N +E KS+ S  RGS
Subjt:  ALPVSQ-PDSTQT-------LRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETKSLRSNCRGS

Query:  FRHLFYKVRSEFRKLI-RSDRVGLPQTFKY
          H+F+K+RS+ R  +  S    LP + KY
Subjt:  FRHLFYKVRSEFRKLI-RSDRVGLPQTFKY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTCCATTCCACGGCGGAGCTTTCTTCCTACGCGGCCTCTCAACGACGCGCTCCCTGTCTCGCAGCCGGACTCCACACAGACGCTACGCCGAAGGCTCTCTTCGAT
TTCCTTCAAGATCCAGCCGATTTCTTCGCCTGTTACTTCCTGGTCGTTTCATAGATCTAAATCGGTGTCTTCTTTGCGCGATCACACTGGCAAATCGCTCCGGAAGTGGT
GGGATTGGGGATGGTCCTGGATCCTCTCTCGCAAGGCTGCCTTCGCTCGAGATCTGGAAATGAACGATGAAGAAACAAAATCTCTTAGATCTAATTGCAGAGGTAGTTTC
AGACATCTTTTCTATAAGGTTAGGTCTGAGTTCCGCAAACTGATTCGCTCCGATCGCGTCGGTCTTCCTCAAACTTTCAAATACGATTCGGTTAATTACTCGAAGAATTT
CGATGACGGTGTGAAATCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTTCCATTCCACGGCGGAGCTTTCTTCCTACGCGGCCTCTCAACGACGCGCTCCCTGTCTCGCAGCCGGACTCCACACAGACGCTACGCCGAAGGCTCTCTTCGAT
TTCCTTCAAGATCCAGCCGATTTCTTCGCCTGTTACTTCCTGGTCGTTTCATAGATCTAAATCGGTGTCTTCTTTGCGCGATCACACTGGCAAATCGCTCCGGAAGTGGT
GGGATTGGGGATGGTCCTGGATCCTCTCTCGCAAGGCTGCCTTCGCTCGAGATCTGGAAATGAACGATGAAGAAACAAAATCTCTTAGATCTAATTGCAGAGGTAGTTTC
AGACATCTTTTCTATAAGGTTAGGTCTGAGTTCCGCAAACTGATTCGCTCCGATCGCGTCGGTCTTCCTCAAACTTTCAAATACGATTCGGTTAATTACTCGAAGAATTT
CGATGACGGTGTGAAATCCTAG
Protein sequenceShow/hide protein sequence
MTSIPRRSFLPTRPLNDALPVSQPDSTQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETKSLRSNCRGSF
RHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVKS