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Carg18141 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18141
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionubiquitin-conjugating enzyme E2 5-like
Genome locationCarg_Chr11:599731..601455
RNA-Seq ExpressionCarg18141
SyntenyCarg18141
Gene Ontology termsGO:0044267 - cellular protein metabolic process (biological process)
GO:0000166 - nucleotide binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR000608 - Ubiquitin-conjugating enzyme E2
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587482.1 Ubiquitin-conjugating enzyme E2 5, partial [Cucurbita argyrosperma subsp. sororia]1.2e-5768.72Show/hide
Query:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGIAIICLWVY-------------------------------------------
        ++  MMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGIAIICLWV                                            
Subjt:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGIAIICLWVY-------------------------------------------

Query:  -------------LLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGDVTRHADP
                     LLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGDVTRHADP
Subjt:  -------------LLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGDVTRHADP

KAG7021469.1 Ubiquitin-conjugating enzyme E2 5, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-68100Show/hide
Query:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGIAIICLWVYLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKE
        MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGIAIICLWVYLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKE
Subjt:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGIAIICLWVYLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKE

Query:  YCEKYAKENTAEDDSEEEDEMSDNESSSSDGDVTRHADP
        YCEKYAKENTAEDDSEEEDEMSDNESSSSDGDVTRHADP
Subjt:  YCEKYAKENTAEDDSEEEDEMSDNESSSSDGDVTRHADP

XP_022928134.1 ubiquitin-conjugating enzyme E2 5-like [Cucurbita moschata]1.3e-4568.05Show/hide
Query:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIARLS------------PLSNMHFVVVDGI---------AIICLWVY---------LLNVFEVFLPQLL
        ++  MMSDYNVEMINDGLNEFNVEFHGPKES+                P  +     V+ I           +CL V          LLNVFEVFLPQLL
Subjt:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIARLS------------PLSNMHFVVVDGI---------AIICLWVY---------LLNVFEVFLPQLL

Query:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGDVTRHADP
        LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGDVTRHADP
Subjt:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGDVTRHADP

XP_022968845.1 ubiquitin-conjugating enzyme E2 5-like [Cucurbita maxima]3.9e-4567.46Show/hide
Query:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIARLS------------PLSNMHFVVVDGI---------AIICLWVY---------LLNVFEVFLPQLL
        ++  MMSDYNVEMINDGLNEFNVEFHGPKES+                P  +     V+ I           +CL V          LLNVFEVFLPQLL
Subjt:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIARLS------------PLSNMHFVVVDGI---------AIICLWVY---------LLNVFEVFLPQLL

Query:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGDVTRHADP
        LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNES SSDGDVTRHADP
Subjt:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGDVTRHADP

XP_023530689.1 ubiquitin-conjugating enzyme E2 5-like [Cucurbita pepo subsp. pepo]1.3e-4568.05Show/hide
Query:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIARLS------------PLSNMHFVVVDGI---------AIICLWVY---------LLNVFEVFLPQLL
        ++  MMSDYNVEMINDGLNEFNVEFHGPKES+                P  +     V+ I           +CL V          LLNVFEVFLPQLL
Subjt:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIARLS------------PLSNMHFVVVDGI---------AIICLWVY---------LLNVFEVFLPQLL

Query:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGDVTRHADP
        LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGDVTRHADP
Subjt:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGDVTRHADP

TrEMBL top hitse value%identityAlignment
A0A6J1C0G2 ubiquitin-conjugating enzyme E2-23 kDa-like isoform X11.4e-3558.62Show/hide
Query:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIARLS------------PLSNMHFVVVDGI---------AIICLWVY---------LLNVFEVFLPQLL
        ++  MMSDYNVEMINDGLNEFNVEFHGPKES+                P  +     V+ I           +CL V          LLNVFEVFLPQLL
Subjt:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIARLS------------PLSNMHFVVVDGI---------AIICLWVY---------LLNVFEVFLPQLL

Query:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKEN-----TAEDDSEEEDEMSDNESSSSDGDVTRHADP
        LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCE+YAK+      TAED+S EEDE+S+++S SSD DV  HADP
Subjt:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKEN-----TAEDDSEEEDEMSDNESSSSDGDVTRHADP

A0A6J1E228 ubiquitin-conjugating enzyme E2-23 kDa-like isoform X13.6e-3660Show/hide
Query:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIARLS------------PLSNMHFVVVDGI---------AIICLWVY---------LLNVFEVFLPQLL
        +LSRMMSDYNVEMINDGLNEFNV+FHGPK+S+                P  +     V+ I           +CL V          LLNVFEVFLPQLL
Subjt:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIARLS------------PLSNMHFVVVDGI---------AIICLWVY---------LLNVFEVFLPQLL

Query:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKEN-----TAEDDSEEEDEMSDNESSSSDGD-VTRHADP
        LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCE++AK+      T+ED+S EEDEMSDNES SSD D V  HADP
Subjt:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKEN-----TAEDDSEEEDEMSDNESSSSDGD-VTRHADP

A0A6J1EK00 ubiquitin-conjugating enzyme E2 5-like6.5e-4668.05Show/hide
Query:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIARLS------------PLSNMHFVVVDGI---------AIICLWVY---------LLNVFEVFLPQLL
        ++  MMSDYNVEMINDGLNEFNVEFHGPKES+                P  +     V+ I           +CL V          LLNVFEVFLPQLL
Subjt:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIARLS------------PLSNMHFVVVDGI---------AIICLWVY---------LLNVFEVFLPQLL

Query:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGDVTRHADP
        LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGDVTRHADP
Subjt:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGDVTRHADP

A0A6J1HYC1 ubiquitin-conjugating enzyme E2 5-like1.9e-4567.46Show/hide
Query:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIARLS------------PLSNMHFVVVDGI---------AIICLWVY---------LLNVFEVFLPQLL
        ++  MMSDYNVEMINDGLNEFNVEFHGPKES+                P  +     V+ I           +CL V          LLNVFEVFLPQLL
Subjt:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIARLS------------PLSNMHFVVVDGI---------AIICLWVY---------LLNVFEVFLPQLL

Query:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGDVTRHADP
        LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNES SSDGDVTRHADP
Subjt:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGDVTRHADP

A0A6J1JJH6 ubiquitin-conjugating enzyme E2-23 kDa-like4.7e-3658.62Show/hide
Query:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIARLS------------PLSNMHFVVVDGI---------AIICLWVY---------LLNVFEVFLPQLL
        ++  MMSDYNVEMINDGLNEFNV+FHGPK+S+                P  +     V+ I           +CL V          LLNVFEVFLPQLL
Subjt:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIARLS------------PLSNMHFVVVDGI---------AIICLWVY---------LLNVFEVFLPQLL

Query:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKEN-----TAEDDSEEEDEMSDNESSSSDGDVTRHADP
        LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCE++AK+      T+ED+S EEDEMSDNES SSD DV  HADP
Subjt:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKEN-----TAEDDSEEEDEMSDNESSSSDGDVTRHADP

SwissProt top hitse value%identityAlignment
P16577 Ubiquitin-conjugating enzyme E2-23 kDa3.2e-2645.09Show/hide
Query:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIAR--------------------LSPLSNMHFVVVDGIA-IICLWVY---------LLNVFEVFLPQLL
        ++  MMSDY V+MINDG++EF V FHGPK+SI +                    +   + ++   VD ++  +CL V          L+N+FEVFLPQLL
Subjt:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIAR--------------------LSPLSNMHFVVVDGIA-IICLWVY---------LLNVFEVFLPQLL

Query:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKE---NTAEDDSEEEDEMSDNES-SSSDGDVTRHADP
        LYPNPSDPLNG+AASLMM+D+  Y+ KVKEYCE+YAK    +  E++ E ++E+SD E   S D  +  HADP
Subjt:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKE---NTAEDDSEEEDEMSDNES-SSSDGDVTRHADP

P42748 Ubiquitin-conjugating enzyme E2 42.7e-2545.68Show/hide
Query:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIAR----------------LSP----LSNMHFVVVDGIA-IICLWVY---------LLNVFEVFLPQLL
        M+  MMSDY VE INDG+ EF VEF+GPK+S+ +                 SP    ++ ++   VD ++  +CL V          L+NVFE FLPQLL
Subjt:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIAR----------------LSP----LSNMHFVVVDGIA-IICLWVY---------LLNVFEVFLPQLL

Query:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGD
        LYPNPSDPLNG+AA+LMM+DR  Y+++VKEYCEKYAK     +D   ++E+S+ E  S + D
Subjt:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGD

P42749 Ubiquitin-conjugating enzyme E2 59.4e-2648.15Show/hide
Query:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIAR----------------LSP----LSNMHFVVVDGIA-IICLWVY---------LLNVFEVFLPQLL
        ++  MMSDY VEMINDG+ EF VEF GPK+SI                   SP    ++ ++   VD ++  +CL V          L+NVFE FLPQLL
Subjt:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIAR----------------LSP----LSNMHFVVVDGIA-IICLWVY---------LLNVFEVFLPQLL

Query:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGD
        LYPNPSDPLNG+AA+LMM+DR  Y+++VKEYCEKYAK     ++   +DEMS++E  +SDGD
Subjt:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGD

P42750 Ubiquitin-conjugating enzyme E2 65.7e-2343.6Show/hide
Query:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIAR----------------LSPLSNM-----HFVVVDGIAIICLWVY---------LLNVFEVFLPQLL
        M+  MMSDY V+ +ND L  F V FHGP +S+ +                 SP         H  V +    +CL V          L+NVFE FLPQLL
Subjt:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIAR----------------LSPLSNM-----HFVVVDGIAIICLWVY---------LLNVFEVFLPQLL

Query:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGD---VTRHADP
        LYPNPSDP NG+AASL+M+DR  Y+ KVKEYCEKYAK      D +++D MS++ S S D D   +   ADP
Subjt:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGD---VTRHADP

Q9P7R4 Ubiquitin-conjugating enzyme E2 89.8e-1534.55Show/hide
Query:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKE-----------------------SIARLSPLSNMHFVVVDGIAIICLWVY---------LLNVFEVFLPQ
        ++  +MSDY V ++ND + EF V FHGP E                       SI  ++ + + +   + G   +CL V          ++N+FEVFLPQ
Subjt:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKE-----------------------SIARLSPLSNMHFVVVDGIAIICLWVY---------LLNVFEVFLPQ

Query:  LLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAE---DDSEEEDEMSDNESSSSD
        LL YPN SDPLNG+AA+L++++   Y  KV++Y  +YA +  A+   +DS ++D MS  ++ S D
Subjt:  LLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAE---DDSEEEDEMSDNESSSSD

Arabidopsis top hitse value%identityAlignment
AT1G63800.1 ubiquitin-conjugating enzyme 56.7e-2748.15Show/hide
Query:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIAR----------------LSP----LSNMHFVVVDGIA-IICLWVY---------LLNVFEVFLPQLL
        ++  MMSDY VEMINDG+ EF VEF GPK+SI                   SP    ++ ++   VD ++  +CL V          L+NVFE FLPQLL
Subjt:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIAR----------------LSP----LSNMHFVVVDGIA-IICLWVY---------LLNVFEVFLPQLL

Query:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGD
        LYPNPSDPLNG+AA+LMM+DR  Y+++VKEYCEKYAK     ++   +DEMS++E  +SDGD
Subjt:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGD

AT2G46030.1 ubiquitin-conjugating enzyme 64.1e-2443.6Show/hide
Query:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIAR----------------LSPLSNM-----HFVVVDGIAIICLWVY---------LLNVFEVFLPQLL
        M+  MMSDY V+ +ND L  F V FHGP +S+ +                 SP         H  V +    +CL V          L+NVFE FLPQLL
Subjt:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIAR----------------LSPLSNM-----HFVVVDGIAIICLWVY---------LLNVFEVFLPQLL

Query:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGD---VTRHADP
        LYPNPSDP NG+AASL+M+DR  Y+ KVKEYCEKYAK      D +++D MS++ S S D D   +   ADP
Subjt:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGD---VTRHADP

AT5G41340.1 ubiquitin conjugating enzyme 41.9e-2645.68Show/hide
Query:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIAR----------------LSP----LSNMHFVVVDGIA-IICLWVY---------LLNVFEVFLPQLL
        M+  MMSDY VE INDG+ EF VEF+GPK+S+ +                 SP    ++ ++   VD ++  +CL V          L+NVFE FLPQLL
Subjt:  MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIAR----------------LSP----LSNMHFVVVDGIA-IICLWVY---------LLNVFEVFLPQLL

Query:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGD
        LYPNPSDPLNG+AA+LMM+DR  Y+++VKEYCEKYAK     +D   ++E+S+ E  S + D
Subjt:  LYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTCCAGGATGATGAGTGACTACAACGTGGAGATGATAAACGATGGACTAAACGAATTCAACGTGGAGTTCCACGGTCCCAAAGAAAGTATTGCTCGTCTTTCGCC
TCTGTCAAATATGCATTTCGTAGTCGTCGATGGAATAGCAATTATTTGTTTGTGGGTGTATCTTTTAAACGTTTTCGAGGTTTTTCTTCCCCAGCTTCTTCTTTATCCCA
ATCCTTCAGACCCCCTTAACGGCGATGCAGCATCGCTTATGATGAAGGACCGGAAGCAGTACGATGAAAAAGTTAAAGAGTACTGCGAAAAGTATGCAAAGGAGAACACA
GCAGAAGATGACAGTGAAGAAGAGGATGAAATGAGCGATAACGAAAGCAGTTCGAGTGACGGGGATGTTACTCGACATGCCGATCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTCCAGGATGATGAGTGACTACAACGTGGAGATGATAAACGATGGACTAAACGAATTCAACGTGGAGTTCCACGGTCCCAAAGAAAGTATTGCTCGTCTTTCGCC
TCTGTCAAATATGCATTTCGTAGTCGTCGATGGAATAGCAATTATTTGTTTGTGGGTGTATCTTTTAAACGTTTTCGAGGTTTTTCTTCCCCAGCTTCTTCTTTATCCCA
ATCCTTCAGACCCCCTTAACGGCGATGCAGCATCGCTTATGATGAAGGACCGGAAGCAGTACGATGAAAAAGTTAAAGAGTACTGCGAAAAGTATGCAAAGGAGAACACA
GCAGAAGATGACAGTGAAGAAGAGGATGAAATGAGCGATAACGAAAGCAGTTCGAGTGACGGGGATGTTACTCGACATGCCGATCCATGA
Protein sequenceShow/hide protein sequence
MLSRMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGIAIICLWVYLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENT
AEDDSEEEDEMSDNESSSSDGDVTRHADP