; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg18155 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18155
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRING-type domain-containing protein
Genome locationCarg_Chr11:672597..674971
RNA-Seq ExpressionCarg18155
SyntenyCarg18155
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR039515 - NOT4, modified RING finger, HC subclass (C4C4-type)
IPR039780 - CCR4-NOT transcription complex subunit 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587498.1 hypothetical protein SDJN03_16063, partial [Cucurbita argyrosperma subsp. sororia]1.1e-17390.99Show/hide
Query:  MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFS
        MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFS
Subjt:  MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFS

Query:  ESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELG
        ESPSNSP  LG                            C SGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELG
Subjt:  ESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELG

Query:  VGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
        VGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
Subjt:  VGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR

Query:  ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR
        ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR
Subjt:  ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR

KAG7021482.1 MOT-2 [Cucurbita argyrosperma subsp. argyrosperma]2.7e-196100Show/hide
Query:  MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFS
        MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFS
Subjt:  MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFS

Query:  ESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELG
        ESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELG
Subjt:  ESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELG

Query:  VGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
        VGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
Subjt:  VGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR

Query:  ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS
        ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS
Subjt:  ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS

XP_022933340.1 uncharacterized protein LOC111440610 [Cucurbita moschata]2.5e-19499.42Show/hide
Query:  MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFS
        MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFS
Subjt:  MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFS

Query:  ESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELG
        ESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELG
Subjt:  ESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELG

Query:  VGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
        VGDGDSSIELGKI QRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGIS ACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
Subjt:  VGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR

Query:  ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS
        ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS
Subjt:  ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS

XP_022972777.1 uncharacterized protein LOC111471280 [Cucurbita maxima]1.5e-19197.39Show/hide
Query:  MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFS
        MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNK+NSREIGEQNNRSVHHHSDFS
Subjt:  MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFS

Query:  ESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELG
        ESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPS NVVSQLDSCGDSRNELG
Subjt:  ESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELG

Query:  VGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
        +GDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPN D+HFGYGGISWACGGVMPVP+SCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
Subjt:  VGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR

Query:  ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS
        ILEEDGRCPGCRK YDR+HVDNETNVD GSPTFLLARSYSMISRS
Subjt:  ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS

XP_023529902.1 uncharacterized protein LOC111792615 [Cucurbita pepo subsp. pepo]8.1e-19397.68Show/hide
Query:  MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFS
        MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFS
Subjt:  MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFS

Query:  ESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELG
        ESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGS+TEE+EGDDDCLDDWEAIADALAATDKQHDQCSESSPSGN+VSQLDSCGDSRNELG
Subjt:  ESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELG

Query:  VGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
        VGDGDSSIELGKI QRASMNCRAWRPDDAFRPQSLPTLSKQLSLPN DRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
Subjt:  VGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR

Query:  ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS
        ILEEDGRCPGCRKPYDR+H DNETNVDGGSP FLLARSYSMISRS
Subjt:  ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS

TrEMBL top hitse value%identityAlignment
A0A1S3BVJ1 uncharacterized protein LOC1034939471.4e-16987.68Show/hide
Query:  MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWN-EDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDF
        MVTDSI NAS+SLAPNA DLPLPKKKRVR SKLKQSKLDVRREQWLSRGAVKNKKWN EDNRLDSVV+KTRKDD+LSS KIN REIGE+N+RSVHHHSD+
Subjt:  MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWN-EDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDF

Query:  SESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSIT---EEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSR
        S+SPSNSPPSLGSSIL GNDS PHFTGSSSSSSCRSSSSGC+SGSIT   EEEEGDDDCLDDWEAIADALAATDKQ DQCSESSP GNVVSQLDSCGD R
Subjt:  SESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSIT---EEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSR

Query:  NELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLF
        NELGVGDGDS++E G+I QRASMNCRAWRPDDAFRPQSLPTLSKQLSLPN DR FG GG+ WACGGV+PVPTSCPICFEDLD TDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS
        CHKRILEEDGRCPGCRKPYDR+  DNETN+  GSPT  LARS SMISRS
Subjt:  CHKRILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS

A0A5A7UPV5 Suppressor protein SRP40 isoform X24.0e-16987.64Show/hide
Query:  MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWN-EDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDF
        MVTDSI NAS+SLAPNA DLPLPKKKRVR SKLKQSKLDVRREQWLSRGAVKNKKWN EDNRLDSVV+KTRKDD+LSS KIN REIGE+N+RSVHHHSD+
Subjt:  MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWN-EDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDF

Query:  SESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSIT---EEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSR
        S+SPSNSPPSLGSSIL GNDS PHFTGSSSSSSCRSSSSGC+SGSIT   EEEEGDDDCLDDWEAIADALAATDKQ DQCSESSP GNVVSQLDSCGD R
Subjt:  SESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSIT---EEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSR

Query:  NELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLF
        NELGVGDGDS++E G+I QRASMNCRAWRPDDAFRPQSLPTLSKQLSLPN DR FG GG+ WACGGV+PVPTSCPICFEDLD TDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR
        CHKRILEEDGRCPGCRKPYDR+  DNETN+  GSPT  LARS SMISR
Subjt:  CHKRILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR

A0A5D3BIS7 Suppressor protein SRP40 isoform X21.5e-16887.61Show/hide
Query:  MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWN-EDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDF
        MVTDSI NAS+SLAPNA DLPLPKKKRVR SKLKQSKLDVRREQWLSRGAVKNKKWN EDNRLDSVV+KTRKDD+LSS KIN REIGE+N+RSVHHHSD+
Subjt:  MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWN-EDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDF

Query:  SESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSIT---EEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSR
        S+SPSNSPPSLGSSIL GNDS PHFTGSSSSSSCRSSSSGC+SGSIT   EEEEGDDDCLDDWEAIADALAATDKQ DQCSESSP GNVVSQLDSCGD R
Subjt:  SESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSIT---EEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSR

Query:  NELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLF
        NELGVGDGDS++E G+I QRASMNCRAWRPDDAFRPQSLPTLSKQLSLPN DR FG GG+ WACGGV+PVPTSCPICFEDLD TDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMIS
        CHKRILEEDGRCPGCRKPYDR+  DNETN+  GSPT  LARS SMIS
Subjt:  CHKRILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMIS

A0A6J1F4L8 uncharacterized protein LOC1114406101.2e-19499.42Show/hide
Query:  MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFS
        MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFS
Subjt:  MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFS

Query:  ESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELG
        ESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELG
Subjt:  ESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELG

Query:  VGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
        VGDGDSSIELGKI QRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGIS ACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
Subjt:  VGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR

Query:  ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS
        ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS
Subjt:  ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS

A0A6J1I5R9 uncharacterized protein LOC1114712807.4e-19297.39Show/hide
Query:  MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFS
        MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNK+NSREIGEQNNRSVHHHSDFS
Subjt:  MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFS

Query:  ESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELG
        ESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPS NVVSQLDSCGDSRNELG
Subjt:  ESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELG

Query:  VGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
        +GDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPN D+HFGYGGISWACGGVMPVP+SCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
Subjt:  VGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR

Query:  ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS
        ILEEDGRCPGCRK YDR+HVDNETNVD GSPTFLLARSYSMISRS
Subjt:  ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS

SwissProt top hitse value%identityAlignment
O95628 CCR4-NOT transcription complex subunit 49.5e-1149.06Show/hide
Query:  PTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRE
        P  CP+C E L+  D +F PC CG+++C FC  RI  +E+G CP CRKPY  +
Subjt:  PTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRE

P34909 General negative regulator of transcription subunit 45.6e-1150Show/hide
Query:  CPICFEDLDFTDSSFLPCFCGFRLCLFCHKRIL---EEDGRCPGCRKPYDREHV
        CP+C E +D TD +F PC CG+++C FC+  I    E +GRCP CR+ YD E+V
Subjt:  CPICFEDLDFTDSSFLPCFCGFRLCLFCHKRIL---EEDGRCPGCRKPYDREHV

Q09818 Putative general negative regulator of transcription C16C9.04c1.6e-1050Show/hide
Query:  CPICFEDLDFTDSSFLPCFCGFRLCLFCHKRILEE-DGRCPGCRKPYDREHV
        CP+C E++D +D +F PC CG+R+C FC   I E+ +GRCP CR+ Y  E+V
Subjt:  CPICFEDLDFTDSSFLPCFCGFRLCLFCHKRILEE-DGRCPGCRKPYDREHV

Q8BT14 CCR4-NOT transcription complex subunit 49.5e-1149.06Show/hide
Query:  PTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRE
        P  CP+C E L+  D +F PC CG+++C FC  RI  +E+G CP CRKPY  +
Subjt:  PTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRE

Arabidopsis top hitse value%identityAlignment
AT1G74870.1 RING/U-box superfamily protein7.0e-1729.49Show/hide
Query:  KKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNE-DNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDSVP
        K+K   + KLKQ K+D RR+QW+S+    N    E   RL S++ K     D  + +I+  +  E +   +   S F+ SP        +S+L   DSV 
Subjt:  KKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNE-DNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDSVP

Query:  HFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCR
             S    C      C      EEEE  DD  D+W+   DAL + +      ++++ S  +V++     D   E      D+S  + K  Q A+    
Subjt:  HFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCR

Query:  AWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDR
                   ++   S +    N+++  G G               CPIC E +D TD  F PC CGFR+CLFCH +I E + RCP CRK Y +
Subjt:  AWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDR

AT3G45630.1 RNA binding (RRM/RBD/RNP motifs) family protein1.5e-1141.38Show/hide
Query:  SCPICFEDLDFTDSSFLPCFCGFRLCLFCHKRIL------EEDGRCPGCRKPYDREHV
        +CP+C E++D TD    PC CG+++C++C   I+      + +GRCP CR PYD+E +
Subjt:  SCPICFEDLDFTDSSFLPCFCGFRLCLFCHKRIL------EEDGRCPGCRKPYDREHV

AT3G48070.1 RING/U-box superfamily protein6.0e-6947.29Show/hide
Query:  MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFS
        M++DSITNAS + AP A D    KK+  R +KLKQSKL +RREQWLS+ A+ NK   E+   +  +   + D       + +    +++N   H H  F 
Subjt:  MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFS

Query:  ESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDD-CLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSC---GDSR
        ES SNSP    +SIL G +S+P+F+ SSS     S S G  SG+ITEEE+ DDD CLDDWEAIADALAA D++H++  E+ P        +SC    D +
Subjt:  ESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDD-CLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSC---GDSR

Query:  NELGVGDGDSSIELGKI--AQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLC
            +G  D  +   K    +R   + +AWRPDD  RPQ LP L KQ S P  + HF           V  VP+SCPIC+EDLD TDS+FLPC CGFRLC
Subjt:  NELGVGDGDSSIELGKI--AQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLC

Query:  LFCHKRILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS
        LFCHK I + DGRCPGCRKPY+R  +  E +V GG  T  LARS SM  RS
Subjt:  LFCHKRILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS

AT3G48070.2 RING/U-box superfamily protein1.3e-6847.14Show/hide
Query:  MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFS
        M++DSITNAS + AP A D    KK+  R +KLKQSKL +RREQWLS+ A+ NK   E+   +  +   + D       + +    +++N   H H  F 
Subjt:  MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFS

Query:  ESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDD-CLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSC---GDSR
        ES SNSP    +SIL G +S+P+F+ SSS     S S G  SG+ITEEE+ DDD CLDDWEAIADALAA D++H++  E+ P        +SC    D +
Subjt:  ESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDD-CLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSC---GDSR

Query:  NELGVGDGDSSIELGKI--AQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLC
            +G  D  +   K    +R   + +AWRPDD  RPQ LP L KQ S P  + HF           V  VP+SCPIC+EDLD TDS+FLPC CGFRLC
Subjt:  NELGVGDGDSSIELGKI--AQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLC

Query:  LFCHKRILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR
        LFCHK I + DGRCPGCRKPY+R  +  E +V GG  T  LARS SM  R
Subjt:  LFCHKRILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR

AT5G62910.1 RING/U-box superfamily protein9.6e-6746.5Show/hide
Query:  MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFS
        M+TDSITNAS + AP        KK+  + +K+KQ+KL +RREQWLS+ AV NK+  E+  ++    +++K    SS+K+   E     N  +HH S F 
Subjt:  MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFS

Query:  ESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDD---CLDDWEAIADALAATDK----------QHDQCSESSPSGNVVS
        ESPSNS  S+G     G  S  +F+G SS SS  SSSSG  SG+ITEEE  DDD   C+DDWEA+ADALAA ++            +Q S    + NV  
Subjt:  ESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDD---CLDDWEAIADALAATDK----------QHDQCSESSPSGNVVS

Query:  QLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPC
           S  D+ + +GV D     E  +++ R   + RAWR DD  RPQ LP L+KQLS P  D+ F            + +P+SCPIC+EDLD TDS+FLPC
Subjt:  QLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPC

Query:  FCGFRLCLFCHKRILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR
         CGFRLCLFCHK I + DGRCPGCRKPY+R  V  ET++ GG  T  LARS SM  +
Subjt:  FCGFRLCLFCHKRILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTACTGATTCGATTACCAATGCTTCAGTTTCTTTGGCTCCGAACGCTGGGGATTTGCCCTTGCCCAAGAAGAAGAGGGTTAGGTATTCCAAATTGAAGCAGTCCAA
GCTTGATGTTCGTCGGGAACAATGGCTTTCTCGAGGTGCTGTAAAGAACAAAAAATGGAACGAAGACAATCGTCTTGACTCAGTGGTCGTTAAAACGAGGAAAGATGATG
ATCTTTCCTCTAATAAAATAAATTCGAGGGAAATAGGAGAACAGAACAACAGATCGGTCCACCACCACAGCGATTTTTCAGAGTCGCCGTCTAATAGTCCCCCTAGTCTT
GGGAGTAGTATCCTGTGTGGTAATGATTCGGTTCCTCACTTTACTGGGAGTAGCAGTAGTAGTAGTTGCCGAAGCAGCTCTAGTGGTTGTCAGTCGGGGAGTATAACGGA
GGAGGAAGAAGGAGATGATGACTGCTTGGATGATTGGGAGGCTATTGCCGATGCCCTAGCCGCCACTGACAAGCAGCATGATCAATGTTCAGAGTCTTCCCCTAGCGGTA
ATGTTGTTTCTCAATTGGATTCTTGCGGAGACAGCAGAAATGAGTTGGGCGTAGGAGATGGTGACTCGAGTATTGAACTCGGGAAAATTGCGCAGAGGGCTTCGATGAAT
TGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCCTCAGAGTCTGCCTACGTTATCAAAGCAGCTTAGTTTACCAAATGCAGACAGGCATTTTGGATATGGAGGCATCTC
TTGGGCCTGTGGTGGTGTTATGCCTGTGCCTACATCTTGTCCAATTTGCTTTGAAGACTTAGACTTTACAGACTCGAGTTTCTTACCTTGTTTCTGTGGATTTCGGCTTT
GCCTTTTCTGTCATAAAAGGATTCTTGAAGAGGATGGGCGCTGTCCTGGTTGCAGGAAGCCATATGATCGTGAACATGTTGACAATGAAACAAATGTAGATGGTGGTAGC
CCAACGTTCCTGTTGGCACGTTCTTATAGCATGATTTCAAGGTCTTAG
mRNA sequenceShow/hide mRNA sequence
TGGAAAAGAGCGAGCGAAGCAGAGTAGTTTACGTTATCCATTATCTCTCTTTCTCCTTCCAAGGTCGTCTTCTCAATTATTCTCGCAAATTAGGGTTTTTCGCGAACTTC
TTCCCTTCATTTCGATTTCAACTCTTCAATCATGGTTACTGATTCGATTACCAATGCTTCAGTTTCTTTGGCTCCGAACGCTGGGGATTTGCCCTTGCCCAAGAAGAAGA
GGGTTAGGTATTCCAAATTGAAGCAGTCCAAGCTTGATGTTCGTCGGGAACAATGGCTTTCTCGAGGTGCTGTAAAGAACAAAAAATGGAACGAAGACAATCGTCTTGAC
TCAGTGGTCGTTAAAACGAGGAAAGATGATGATCTTTCCTCTAATAAAATAAATTCGAGGGAAATAGGAGAACAGAACAACAGATCGGTCCACCACCACAGCGATTTTTC
AGAGTCGCCGTCTAATAGTCCCCCTAGTCTTGGGAGTAGTATCCTGTGTGGTAATGATTCGGTTCCTCACTTTACTGGGAGTAGCAGTAGTAGTAGTTGCCGAAGCAGCT
CTAGTGGTTGTCAGTCGGGGAGTATAACGGAGGAGGAAGAAGGAGATGATGACTGCTTGGATGATTGGGAGGCTATTGCCGATGCCCTAGCCGCCACTGACAAGCAGCAT
GATCAATGTTCAGAGTCTTCCCCTAGCGGTAATGTTGTTTCTCAATTGGATTCTTGCGGAGACAGCAGAAATGAGTTGGGCGTAGGAGATGGTGACTCGAGTATTGAACT
CGGGAAAATTGCGCAGAGGGCTTCGATGAATTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCCTCAGAGTCTGCCTACGTTATCAAAGCAGCTTAGTTTACCAAATG
CAGACAGGCATTTTGGATATGGAGGCATCTCTTGGGCCTGTGGTGGTGTTATGCCTGTGCCTACATCTTGTCCAATTTGCTTTGAAGACTTAGACTTTACAGACTCGAGT
TTCTTACCTTGTTTCTGTGGATTTCGGCTTTGCCTTTTCTGTCATAAAAGGATTCTTGAAGAGGATGGGCGCTGTCCTGGTTGCAGGAAGCCATATGATCGTGAACATGT
TGACAATGAAACAAATGTAGATGGTGGTAGCCCAACGTTCCTGTTGGCACGTTCTTATAGCATGATTTCAAGGTCTTAGCTAGTGTCCAGTTTCTGTGAGTTTATGTTCA
TCTGGTCTCACCTTTTTTTTTTTTTTTGTCGTATGTCTCTTGGGTATTATGGTGGTCTGCTCTGCTTTTCATAGCAATAGATGTGGCATTTGGGTGTTGAAGTATGGTTA
TGAGATTGAGAACCTTTAAACTGATTTGCTTCGTACATGAGTGTGGTTCTTATCTTATGATACATTTGCCAATGTAGAGGACTTATTTCGTACTTGATATGTGAATAGAT
GAGGTGGTATAGAAATGAATACATGGAATAATGATACAACATTTATTTTTGTCCGCATCTTATTTATTTGTATTTGCATATATTTCATAGAATGCCTGAAACTGTTCTAG
TTAGTACTTTCCTCCTTATTCTTGCTGGTTTTATGATACTTAGTGTCGTGATTGACTACTCATATATGGTTTTGTAGCATGTGGCAAGACTCCCAGGCGTATATACACGC
TAAAATGAAATGTGGAAATATTTGTAATAACTTCTATGTCACAACTAATTGTTCAATGCTTTTGATGTACATAGCCAGCACCAGCAGTTGAATGTCTGAGATCAGTCAAA
GGTAAAAGCTTAACTTGTTTTGCTTTAGAGTTTAGACATGTTGGTTTACTATTGTTTTAATGACTGTTTTAGGATCTGAGGAGTGAACACTGAACGTGGATTGTTATAGA
AGAATCTTTGGTTTGATGCACTTTAACATATCTTCATTGGGTTATAGTTCACTTTTTGTTTTTTTTCTTCAGAAACTACTCTTAGTGTTGATGTTTAATGATTGGGACCC
TTGATTGTAACTTTTTGGTTCTAACCTGTTCTATTTTGACAGCGTTCTTTTTTATGTATGTTGATTCTTCTTAATAAAAGTGGGTTCCTTTTTTTTTCATTCATTTCAAA
ATGAA
Protein sequenceShow/hide protein sequence
MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSL
GSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMN
CRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDREHVDNETNVDGGS
PTFLLARSYSMISRS