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Carg18181 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18181
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHVA22 homologue A
Genome locationCarg_Chr11:820978..823352
RNA-Seq ExpressionCarg18181
SyntenyCarg18181
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021508.1 hypothetical protein SDJN02_15233 [Cucurbita argyrosperma subsp. argyrosperma]3.1e-49100Show/hide
Query:  MGSGAGSFFKVILKNFDVLAGPCHQFVVARAPGLDVGELRPGHCLWLALFILYMRRLEPLKQSLMWTISSGLPTGSYILCSPCSSLHFPKFSNGKS
        MGSGAGSFFKVILKNFDVLAGPCHQFVVARAPGLDVGELRPGHCLWLALFILYMRRLEPLKQSLMWTISSGLPTGSYILCSPCSSLHFPKFSNGKS
Subjt:  MGSGAGSFFKVILKNFDVLAGPCHQFVVARAPGLDVGELRPGHCLWLALFILYMRRLEPLKQSLMWTISSGLPTGSYILCSPCSSLHFPKFSNGKS
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
Q9S7V4 HVA22-like protein a2.4e-0436.84Show/hide
Query:  MGSGAGSFFKVILKNFDVLAGPCHQFVVARAPGLDVGELRPGHC---LWLALFILYMRRLEPLKQSLMWTISSGLPTGSYILCSPCSSLHFPKFS
        MGSGAG+F KV+L+NFDVLAGP    V      +   E +  H     WL  ++LY   L  L +     +   LP  SY+       L  P FS
Subjt:  MGSGAGSFFKVILKNFDVLAGPCHQFVVARAPGLDVGELRPGHC---LWLALFILYMRRLEPLKQSLMWTISSGLPTGSYILCSPCSSLHFPKFS
Arabidopsis top hitse value%identityAlignment
AT1G74520.1 HVA22 homologue A1.7e-0536.84Show/hide
Query:  MGSGAGSFFKVILKNFDVLAGPCHQFVVARAPGLDVGELRPGHC---LWLALFILYMRRLEPLKQSLMWTISSGLPTGSYILCSPCSSLHFPKFS
        MGSGAG+F KV+L+NFDVLAGP    V      +   E +  H     WL  ++LY   L  L +     +   LP  SY+       L  P FS
Subjt:  MGSGAGSFFKVILKNFDVLAGPCHQFVVARAPGLDVGELRPGHC---LWLALFILYMRRLEPLKQSLMWTISSGLPTGSYILCSPCSSLHFPKFS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATCTGGAGCGGGCAGTTTCTTCAAGGTCATCCTCAAAAACTTCGATGTTCTTGCCGGGCCGTGCCATCAGTTTGTTGTGGCAAGAGCTCCTGGTTTGGATGTTGG
AGAACTGAGGCCTGGTCATTGCCTCTGGTTAGCCTTGTTTATCCTCTATATGCGTCGGTTAGAGCCATTGAAACAAAGTCTCATGTGGACGATCAGCAGTGGCTTACCTA
CTGGATCCTATATTCTATGCTCACCCTGTTCGAGCTTACATTTTCCAAAGTTCTCGAATGGTAAATCTTGA
mRNA sequenceShow/hide mRNA sequence
TAAATTAAATAGATTAACATCGCATCAAAATTCCTTCATATTCTCCTGTTCTTTTATGTATCTCTTTATTCCATCCTCCTTTTTTCTCTCTCTTTTCCCACTGAAAAGTT
TGTAAGACTACAGTGTGTATAAAGTAAACAGATGGTGAGCATTTATTGGCTAGTTTCTTTCTGAGCAAAGTTCCAGCCTTTCCAGTCACTCTCTTTCTGGGCAACCGACG
CAAGAGCATTACGAGAAGCAAATAATCAAGAAGCTTCAGACCAGACGGGCAGTCGGTGAAGGGGAAAATTTTCGAAATGGGATCTGGAGCGGGCAGTTTCTTCAAGGTCA
TCCTCAAAAACTTCGATGTTCTTGCCGGGCCGTGCCATCAGTTTGTTGTGGCAAGAGCTCCTGGTTTGGATGTTGGAGAACTGAGGCCTGGTCATTGCCTCTGGTTAGCC
TTGTTTATCCTCTATATGCGTCGGTTAGAGCCATTGAAACAAAGTCTCATGTGGACGATCAGCAGTGGCTTACCTACTGGATCCTATATTCTATGCTCACCCTGTTCGAG
CTTACATTTTCCAAAGTTCTCGAATGGTAAATCTTGA
Protein sequenceShow/hide protein sequence
MGSGAGSFFKVILKNFDVLAGPCHQFVVARAPGLDVGELRPGHCLWLALFILYMRRLEPLKQSLMWTISSGLPTGSYILCSPCSSLHFPKFSNGKS