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Carg18197 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18197
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr11:878344..879405
RNA-Seq ExpressionCarg18197
SyntenyCarg18197
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021524.1 hypothetical protein SDJN02_15249, partial [Cucurbita argyrosperma subsp. argyrosperma]6.2e-128100Show/hide
Query:  MSDSDIICKSSSPPLANIVFFGFHFYASPQVLECSERTWLLTQLAASNVPYNITALHWHASYQLISLFSKPSSSQNIPIHSVLKRGLDIQCLAIRSKCLL
        MSDSDIICKSSSPPLANIVFFGFHFYASPQVLECSERTWLLTQLAASNVPYNITALHWHASYQLISLFSKPSSSQNIPIHSVLKRGLDIQCLAIRSKCLL
Subjt:  MSDSDIICKSSSPPLANIVFFGFHFYASPQVLECSERTWLLTQLAASNVPYNITALHWHASYQLISLFSKPSSSQNIPIHSVLKRGLDIQCLAIRSKCLL

Query:  PSSTFPQWLYKLIILPRKLHQESQASLLTSLRIVSVHPLHHHALLMPSSLCSILCILCASSTAPHLAYMSINEAQSMPRQSQLVWFHRSPRHSAQHLQTS
        PSSTFPQWLYKLIILPRKLHQESQASLLTSLRIVSVHPLHHHALLMPSSLCSILCILCASSTAPHLAYMSINEAQSMPRQSQLVWFHRSPRHSAQHLQTS
Subjt:  PSSTFPQWLYKLIILPRKLHQESQASLLTSLRIVSVHPLHHHALLMPSSLCSILCILCASSTAPHLAYMSINEAQSMPRQSQLVWFHRSPRHSAQHLQTS

Query:  KLPAVLMSSNLAMHMNRRFPRIRMKFKAKFQNTY
        KLPAVLMSSNLAMHMNRRFPRIRMKFKAKFQNTY
Subjt:  KLPAVLMSSNLAMHMNRRFPRIRMKFKAKFQNTY
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGATTCTGATATCATTTGTAAGAGCTCAAGCCCACCACTAGCAAATATCGTTTTTTTTGGCTTTCACTTCTACGCTTCCCCTCAAGTTTTAGAATGCTCGGAAAG
AACATGGCTCCTTACTCAATTGGCAGCGAGTAATGTTCCATATAATATCACGGCACTCCATTGGCATGCTTCTTATCAGCTGATAAGCTTGTTCAGTAAACCCAGCTCGT
CCCAGAATATCCCGATCCATAGTGTGCTTAAGCGTGGGTTGGATATTCAGTGTTTGGCCATAAGATCAAAATGCCTCCTCCCTTCCTCCACCTTTCCTCAGTGGCTATAC
AAGCTCATAATACTCCCACGAAAGTTACATCAGGAGTCTCAAGCTTCTCTCTTAACATCTTTGAGAATAGTGTCGGTGCATCCTCTGCATCACCATGCGTTGCTAATGCC
ATCATCATTGTGTTCCATCCTCTGCATCCTGTGCGCGTCTTCGACTGCCCCACACTTGGCGTACATGTCGATCAATGAAGCGCAGAGCATGCCAAGACAGTCACAACTAG
TATGGTTTCATCGGTCTCCACGCCACTCCGCGCAACATTTGCAAACAAGCAAGTTGCCTGCTGTTTTGATGTCTTCTAATCTTGCCATGCATATGAATAGGCGTTTTCCT
CGCATACGCATGAAATTCAAAGCCAAGTTTCAGAATACCTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGATTCTGATATCATTTGTAAGAGCTCAAGCCCACCACTAGCAAATATCGTTTTTTTTGGCTTTCACTTCTACGCTTCCCCTCAAGTTTTAGAATGCTCGGAAAG
AACATGGCTCCTTACTCAATTGGCAGCGAGTAATGTTCCATATAATATCACGGCACTCCATTGGCATGCTTCTTATCAGCTGATAAGCTTGTTCAGTAAACCCAGCTCGT
CCCAGAATATCCCGATCCATAGTGTGCTTAAGCGTGGGTTGGATATTCAGTGTTTGGCCATAAGATCAAAATGCCTCCTCCCTTCCTCCACCTTTCCTCAGTGGCTATAC
AAGCTCATAATACTCCCACGAAAGTTACATCAGGAGTCTCAAGCTTCTCTCTTAACATCTTTGAGAATAGTGTCGGTGCATCCTCTGCATCACCATGCGTTGCTAATGCC
ATCATCATTGTGTTCCATCCTCTGCATCCTGTGCGCGTCTTCGACTGCCCCACACTTGGCGTACATGTCGATCAATGAAGCGCAGAGCATGCCAAGACAGTCACAACTAG
TATGGTTTCATCGGTCTCCACGCCACTCCGCGCAACATTTGCAAACAAGCAAGTTGCCTGCTGTTTTGATGTCTTCTAATCTTGCCATGCATATGAATAGGCGTTTTCCT
CGCATACGCATGAAATTCAAAGCCAAGTTTCAGAATACCTATTAA
Protein sequenceShow/hide protein sequence
MSDSDIICKSSSPPLANIVFFGFHFYASPQVLECSERTWLLTQLAASNVPYNITALHWHASYQLISLFSKPSSSQNIPIHSVLKRGLDIQCLAIRSKCLLPSSTFPQWLY
KLIILPRKLHQESQASLLTSLRIVSVHPLHHHALLMPSSLCSILCILCASSTAPHLAYMSINEAQSMPRQSQLVWFHRSPRHSAQHLQTSKLPAVLMSSNLAMHMNRRFP
RIRMKFKAKFQNTY