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Carg18220 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18220
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGDSL esterase/lipase At1g28570-like
Genome locationCarg_Chr04:18270451..18270843
RNA-Seq ExpressionCarg18220
SyntenyCarg18220
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594558.1 GDSL esterase/lipase, partial [Cucurbita argyrosperma subsp. sororia]8.0e-0851.85Show/hide
Query:  SLLHLAFCLCLFRPLSSWSYIFHLQLRRFPSDTGNLYYTCSSPNPAHVLLPSLRGDLSPSPTGRFSDGRVIL----TSLSL
        SLLHLAF            Y          SDTGNLYYTCSSPNP HV  P         PTGRFSDGRVIL    TSL L
Subjt:  SLLHLAFCLCLFRPLSSWSYIFHLQLRRFPSDTGNLYYTCSSPNPAHVLLPSLRGDLSPSPTGRFSDGRVIL----TSLSL

KAG6594559.1 GDSL esterase/lipase, partial [Cucurbita argyrosperma subsp. sororia]2.5e-0953.49Show/hide
Query:  MAPSISLLHLAFCLCLFRPLSSWSYIFHLQLRRFPSDTGNLYYTCSSPNPAHVLLPSLRGDLSPSPTGRFSDGRVIL----TSLSL
        MAPSI LLHLAF            Y          SDTGNLYYTCSSPNPAHV            PTGRFSDGRVIL    TSL L
Subjt:  MAPSISLLHLAFCLCLFRPLSSWSYIFHLQLRRFPSDTGNLYYTCSSPNPAHVLLPSLRGDLSPSPTGRFSDGRVIL----TSLSL

KAG7026531.1 GDSL esterase/lipase [Cucurbita argyrosperma subsp. argyrosperma]2.5e-0953.49Show/hide
Query:  MAPSISLLHLAFCLCLFRPLSSWSYIFHLQLRRFPSDTGNLYYTCSSPNPAHVLLPSLRGDLSPSPTGRFSDGRVIL----TSLSL
        MAPSI LLHLAF            Y          SDTGNLYYTCSSPNPAHV            PTGRFSDGRVIL    TSL L
Subjt:  MAPSISLLHLAFCLCLFRPLSSWSYIFHLQLRRFPSDTGNLYYTCSSPNPAHVLLPSLRGDLSPSPTGRFSDGRVIL----TSLSL

KAG7032774.1 hypothetical protein SDJN02_06824, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-68100Show/hide
Query:  MAPSISLLHLAFCLCLFRPLSSWSYIFHLQLRRFPSDTGNLYYTCSSPNPAHVLLPSLRGDLSPSPTGRFSDGRVILTSLSLLNFLTQLCYNVLFPDNTR
        MAPSISLLHLAFCLCLFRPLSSWSYIFHLQLRRFPSDTGNLYYTCSSPNPAHVLLPSLRGDLSPSPTGRFSDGRVILTSLSLLNFLTQLCYNVLFPDNTR
Subjt:  MAPSISLLHLAFCLCLFRPLSSWSYIFHLQLRRFPSDTGNLYYTCSSPNPAHVLLPSLRGDLSPSPTGRFSDGRVILTSLSLLNFLTQLCYNVLFPDNTR

Query:  IHLNSMSCSYIVGLSSGSPISECGDGRRGD
        IHLNSMSCSYIVGLSSGSPISECGDGRRGD
Subjt:  IHLNSMSCSYIVGLSSGSPISECGDGRRGD

XP_023518482.1 GDSL esterase/lipase At1g28570-like [Cucurbita pepo subsp. pepo]9.4e-0948.42Show/hide
Query:  MAPSISLLHLAFCLCLFRPLSSWSYIFHLQLRRFP---------SDTGNLYYTCSSPNPAHVLLPSLRGDLSPSPTGRFSDGRVIL----TSLSL
        MAPSI LLHLA          ++++  H  + R+          SDTGNLYYTCSSPNPAHV            PTGRFSDGRVIL    TSL L
Subjt:  MAPSISLLHLAFCLCLFRPLSSWSYIFHLQLRRFP---------SDTGNLYYTCSSPNPAHVLLPSLRGDLSPSPTGRFSDGRVIL----TSLSL

TrEMBL top hitse value%identityAlignment
A0A1S3AZJ0 GDSL esterase/lipase At1g28570-like5.2e-0545.57Show/hide
Query:  SISLLHLAFCLCLFRPLSSWSYIFHLQLRRFPSDTGNLYYTCSSPNPAHVLLPSLRGDLSPSPTGRFSDGRVILTSLSL
        S  LLHL F L  F P     Y          SDTGNLYYTCS PNP +V            PTGRFSDGR++L  L++
Subjt:  SISLLHLAFCLCLFRPLSSWSYIFHLQLRRFPSDTGNLYYTCSSPNPAHVLLPSLRGDLSPSPTGRFSDGRVILTSLSL

A0A5D3CNP6 GDSL esterase/lipase5.2e-0545.57Show/hide
Query:  SISLLHLAFCLCLFRPLSSWSYIFHLQLRRFPSDTGNLYYTCSSPNPAHVLLPSLRGDLSPSPTGRFSDGRVILTSLSL
        S  LLHL F L  F P     Y          SDTGNLYYTCS PNP +V            PTGRFSDGR++L  L++
Subjt:  SISLLHLAFCLCLFRPLSSWSYIFHLQLRRFPSDTGNLYYTCSSPNPAHVLLPSLRGDLSPSPTGRFSDGRVILTSLSL

A0A6J1EFN7 GDSL esterase/lipase At1g28570-like5.6e-0750.62Show/hide
Query:  SLLHLAFCLCLFRPLSSWSYIFHLQLRRFPSDTGNLYYTCSSPNPAHVLLPSLRGDLSPSPTGRFSDGRVIL----TSLSL
        SLLHLAF            Y          SDTGNLYYTCSSPNP HV            PTGRFSDGRVIL    TSL L
Subjt:  SLLHLAFCLCLFRPLSSWSYIFHLQLRRFPSDTGNLYYTCSSPNPAHVLLPSLRGDLSPSPTGRFSDGRVIL----TSLSL

A0A6J1KR60 GDSL esterase/lipase At1g28570-like1.1e-0746.51Show/hide
Query:  MAPSISLLHLAFCLCLFRPLSSWSYIFHLQLRRFP---------SDTGNLYYTCSSPNPAHVLLPSLRGDLSPSPTGRFSDGRVIL
        MAPSI  LHLAF    F    ++++  H    R+          SDTGNLYYTCSSPNP +V            PTGRFSDGRV+L
Subjt:  MAPSISLLHLAFCLCLFRPLSSWSYIFHLQLRRFP---------SDTGNLYYTCSSPNPAHVLLPSLRGDLSPSPTGRFSDGRVIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCCTCAATCTCTTTGCTTCATCTTGCTTTTTGCCTTTGCCTTTTCCGTCCACTCTCCTCTTGGAGCTACATCTTCCATCTTCAACTTCGGCGATTCCCTTCCGA
TACCGGAAATCTCTATTACACCTGTTCTTCTCCTAATCCTGCCCATGTTTTGCTTCCTTCCTTACGGGGAGACCTTTCTCCATCGCCCACCGGCCGATTCTCCGACGGCC
GTGTCATCCTCACTTCATTGTCTCTTCTCAATTTTCTAACCCAATTATGTTATAATGTTCTGTTTCCAGATAATACCAGAATTCATCTTAATTCAATGTCTTGCAGCTAC
ATCGTTGGGCTTTCCTCTGGTTCGCCCATATCGGAGTGTGGGGATGGGAGGAGAGGGGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCCTCAATCTCTTTGCTTCATCTTGCTTTTTGCCTTTGCCTTTTCCGTCCACTCTCCTCTTGGAGCTACATCTTCCATCTTCAACTTCGGCGATTCCCTTCCGA
TACCGGAAATCTCTATTACACCTGTTCTTCTCCTAATCCTGCCCATGTTTTGCTTCCTTCCTTACGGGGAGACCTTTCTCCATCGCCCACCGGCCGATTCTCCGACGGCC
GTGTCATCCTCACTTCATTGTCTCTTCTCAATTTTCTAACCCAATTATGTTATAATGTTCTGTTTCCAGATAATACCAGAATTCATCTTAATTCAATGTCTTGCAGCTAC
ATCGTTGGGCTTTCCTCTGGTTCGCCCATATCGGAGTGTGGGGATGGGAGGAGAGGGGATTAG
Protein sequenceShow/hide protein sequence
MAPSISLLHLAFCLCLFRPLSSWSYIFHLQLRRFPSDTGNLYYTCSSPNPAHVLLPSLRGDLSPSPTGRFSDGRVILTSLSLLNFLTQLCYNVLFPDNTRIHLNSMSCSY
IVGLSSGSPISECGDGRRGD