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Carg18238 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18238
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:18182780..18184242
RNA-Seq ExpressionCarg18238
SyntenyCarg18238
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032756.1 hypothetical protein SDJN02_06806, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-108100Show/hide
Query:  MKSYSSSQFLMAMGQNADGSWVGMLIETLNSTNSAISYSCPNHPACLPLQRDFKRAVAEVWQADILSAFKDASLWLLGKNRKNKRKDKRVTYCALLQRKM
        MKSYSSSQFLMAMGQNADGSWVGMLIETLNSTNSAISYSCPNHPACLPLQRDFKRAVAEVWQADILSAFKDASLWLLGKNRKNKRKDKRVTYCALLQRKM
Subjt:  MKSYSSSQFLMAMGQNADGSWVGMLIETLNSTNSAISYSCPNHPACLPLQRDFKRAVAEVWQADILSAFKDASLWLLGKNRKNKRKDKRVTYCALLQRKM

Query:  VKKRKKKESFNLGSADTDLLLWMVDVPVGVSVGCSSSRLLNLNDSVINEAVVESHTYLLPKQSPLDSSISLSRSSKPMLRIKANGCLMLLLDPSSALLIH
        VKKRKKKESFNLGSADTDLLLWMVDVPVGVSVGCSSSRLLNLNDSVINEAVVESHTYLLPKQSPLDSSISLSRSSKPMLRIKANGCLMLLLDPSSALLIH
Subjt:  VKKRKKKESFNLGSADTDLLLWMVDVPVGVSVGCSSSRLLNLNDSVINEAVVESHTYLLPKQSPLDSSISLSRSSKPMLRIKANGCLMLLLDPSSALLIH

Query:  YLLKGI
        YLLKGI
Subjt:  YLLKGI
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGTTATAGTTCTTCACAGTTTCTAATGGCAATGGGTCAAAATGCTGATGGGAGTTGGGTTGGGATGTTAATTGAAACACTGAACAGTACAAATAGTGCAATAAG
TTACAGTTGCCCAAATCATCCTGCCTGCCTGCCTTTACAGCGGGATTTTAAAAGGGCAGTTGCAGAGGTTTGGCAGGCGGATATCTTGTCTGCGTTCAAAGATGCATCTC
TTTGGTTACTAGGGAAGAACAGAAAAAATAAAAGAAAAGATAAAAGGGTTACTTACTGTGCTCTGCTTCAAAGGAAAATGGTAAAGAAAAGAAAAAAGAAAGAAAGTTTC
AATCTTGGTTCAGCTGATACTGATTTATTGCTATGGATGGTTGATGTCCCTGTCGGAGTCAGTGTCGGCTGTAGCAGCTCTCGTTTGTTAAATTTAAATGATTCAGTAAT
TAATGAAGCTGTTGTGGAAAGCCATACTTACTTACTGCCTAAGCAATCCCCTCTGGACTCGTCCATTTCATTAAGTCGTTCTTCAAAGCCTATGCTTCGTATTAAAGCAA
ATGGTTGCTTGATGTTGTTGCTTGACCCCTCCTCGGCTTTGTTAATTCATTATCTTTTGAAAGGAATATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAGTTATAGTTCTTCACAGTTTCTAATGGCAATGGGTCAAAATGCTGATGGGAGTTGGGTTGGGATGTTAATTGAAACACTGAACAGTACAAATAGTGCAATAAG
TTACAGTTGCCCAAATCATCCTGCCTGCCTGCCTTTACAGCGGGATTTTAAAAGGGCAGTTGCAGAGGTTTGGCAGGCGGATATCTTGTCTGCGTTCAAAGATGCATCTC
TTTGGTTACTAGGGAAGAACAGAAAAAATAAAAGAAAAGATAAAAGGGTTACTTACTGTGCTCTGCTTCAAAGGAAAATGGTAAAGAAAAGAAAAAAGAAAGAAAGTTTC
AATCTTGGTTCAGCTGATACTGATTTATTGCTATGGATGGTTGATGTCCCTGTCGGAGTCAGTGTCGGCTGTAGCAGCTCTCGTTTGTTAAATTTAAATGATTCAGTAAT
TAATGAAGCTGTTGTGGAAAGCCATACTTACTTACTGCCTAAGCAATCCCCTCTGGACTCGTCCATTTCATTAAGTCGTTCTTCAAAGCCTATGCTTCGTATTAAAGCAA
ATGGTTGCTTGATGTTGTTGCTTGACCCCTCCTCGGCTTTGTTAATTCATTATCTTTTGAAAGGAATATAA
Protein sequenceShow/hide protein sequence
MKSYSSSQFLMAMGQNADGSWVGMLIETLNSTNSAISYSCPNHPACLPLQRDFKRAVAEVWQADILSAFKDASLWLLGKNRKNKRKDKRVTYCALLQRKMVKKRKKKESF
NLGSADTDLLLWMVDVPVGVSVGCSSSRLLNLNDSVINEAVVESHTYLLPKQSPLDSSISLSRSSKPMLRIKANGCLMLLLDPSSALLIHYLLKGI