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Carg18245 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18245
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionFLZ-type domain-containing protein
Genome locationCarg_Chr04:18128910..18129668
RNA-Seq ExpressionCarg18245
SyntenyCarg18245
Gene Ontology termsNA
InterPro domainsIPR007650 - Zf-FLZ domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602056.1 FCS-Like Zinc finger 5, partial [Cucurbita argyrosperma subsp. sororia]2.4e-68100Show/hide
Query:  MPPPPKRLPIKRSSSEKEILFDVAEPPPIESPNTAYDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQ
        MPPPPKRLPIKRSSSEKEILFDVAEPPPIESPNTAYDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQ
Subjt:  MPPPPKRLPIKRSSSEKEILFDVAEPPPIESPNTAYDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQ

Query:  DEAKEKYSKKGPSGPTAVTKVSAINGETVAAV
        DEAKEKYSKKGPSGPTAVTKVSAINGETVAAV
Subjt:  DEAKEKYSKKGPSGPTAVTKVSAINGETVAAV

XP_008460479.1 PREDICTED: protein MARD1-like [Cucumis melo]8.8e-4775.18Show/hide
Query:  PPPKRLPIKRSSSEKEILFDV--AEPPPIESP--NTAYDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQM
        PPP  LPIKR++S+KEILFDV  A    +++P  ++ +DHRLLSMLSPRNNRRHSDEFPWSS HLRACCLC+RRL++GRDIYMYKGESAFCSAECRQQQM
Subjt:  PPPKRLPIKRSSSEKEILFDV--AEPPPIESP--NTAYDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQM

Query:  NQDEAKEK---YSKKG----PSGPTAVTKVSAINGETVAAV
        NQDEAKEK    SKKG     S PT VTKVSAINGETVAAV
Subjt:  NQDEAKEK---YSKKG----PSGPTAVTKVSAINGETVAAV

XP_022961605.1 uncharacterized protein LOC111462181 [Cucurbita moschata]5.3e-6899.24Show/hide
Query:  MPPPPKRLPIKRSSSEKEILFDVAEPPPIESPNTAYDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQ
        MPPPPKRLPIKRSSSEKEILFD+AEPPPIESPNTAYDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQ
Subjt:  MPPPPKRLPIKRSSSEKEILFDVAEPPPIESPNTAYDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQ

Query:  DEAKEKYSKKGPSGPTAVTKVSAINGETVAAV
        DEAKEKYSKKGPSGPTAVTKVSAINGETVAAV
Subjt:  DEAKEKYSKKGPSGPTAVTKVSAINGETVAAV

XP_022990553.1 uncharacterized protein LOC111487400 [Cucurbita maxima]7.7e-6799.23Show/hide
Query:  PPPKRLPIKRSSSEKEILFDVAEPPPIESPNTAYDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQDE
        PPPKRLPIKRSSSEKEILFDVAEPPPIESPNT+YDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQDE
Subjt:  PPPKRLPIKRSSSEKEILFDVAEPPPIESPNTAYDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQDE

Query:  AKEKYSKKGPSGPTAVTKVSAINGETVAAV
        AKEKYSKKGPSGPTAVTKVSAINGETVAAV
Subjt:  AKEKYSKKGPSGPTAVTKVSAINGETVAAV

XP_023547753.1 uncharacterized protein LOC111806606 [Cucurbita pepo subsp. pepo]1.6e-6799.24Show/hide
Query:  MPPPPKRLPIKRSSSEKEILFDVAEPPPIESPNTAYDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQ
        MPPPPKRLPIKRSSSEKEILFDVAEPPPIESPNTAYDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQ
Subjt:  MPPPPKRLPIKRSSSEKEILFDVAEPPPIESPNTAYDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQ

Query:  DEAKEKYSKKGPSGPTAVTKVSAINGETVAAV
        DEAKEKYSKKGPSGPTAV KVSAINGETVAAV
Subjt:  DEAKEKYSKKGPSGPTAVTKVSAINGETVAAV

TrEMBL top hitse value%identityAlignment
A0A1S3CDU6 protein MARD1-like4.3e-4775.18Show/hide
Query:  PPPKRLPIKRSSSEKEILFDV--AEPPPIESP--NTAYDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQM
        PPP  LPIKR++S+KEILFDV  A    +++P  ++ +DHRLLSMLSPRNNRRHSDEFPWSS HLRACCLC+RRL++GRDIYMYKGESAFCSAECRQQQM
Subjt:  PPPKRLPIKRSSSEKEILFDV--AEPPPIESP--NTAYDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQM

Query:  NQDEAKEK---YSKKG----PSGPTAVTKVSAINGETVAAV
        NQDEAKEK    SKKG     S PT VTKVSAINGETVAAV
Subjt:  NQDEAKEK---YSKKG----PSGPTAVTKVSAINGETVAAV

A0A5D3DT83 Protein MARD1-like8.1e-4674.47Show/hide
Query:  PPPKRLPIKRSSSEKEILFDV--AEPPPIESP--NTAYDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQM
        PPP  LPIKR++S+KEILFDV  A    +++P  ++ +DHRLLSMLSPRNNRRHSDEFPWSS HLRA CLC+RRL++GRDIYMYKGESAFCSAECRQQQM
Subjt:  PPPKRLPIKRSSSEKEILFDV--AEPPPIESP--NTAYDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQM

Query:  NQDEAKEK---YSKKG----PSGPTAVTKVSAINGETVAAV
        NQDEAKEK    SKKG     S PT VTKVSAINGETVAAV
Subjt:  NQDEAKEK---YSKKG----PSGPTAVTKVSAINGETVAAV

A0A6J1FHV9 uncharacterized protein LOC1114455781.8e-4572.99Show/hide
Query:  PPPKRLPIKRSSSEKEILFD-----VAEPPPIESPNTAYDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQ
        PPPKRL IKR++S+KEIL D     VAEP  +++P+T +DHRLL MLS  NNRRHSDEFPWSS +LRACCLCRR LV+GRDIYM+KG+S FCSA CR+QQ
Subjt:  PPPKRLPIKRSSSEKEILFD-----VAEPPPIESPNTAYDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQ

Query:  MNQDEAKEK---YSKKGPSGPTAVTKVSAINGETVAA
        MNQDEAKEK    SKKGP GPTAVTK S INGETVAA
Subjt:  MNQDEAKEK---YSKKGPSGPTAVTKVSAINGETVAA

A0A6J1HCQ2 uncharacterized protein LOC1114621812.6e-6899.24Show/hide
Query:  MPPPPKRLPIKRSSSEKEILFDVAEPPPIESPNTAYDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQ
        MPPPPKRLPIKRSSSEKEILFD+AEPPPIESPNTAYDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQ
Subjt:  MPPPPKRLPIKRSSSEKEILFDVAEPPPIESPNTAYDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQ

Query:  DEAKEKYSKKGPSGPTAVTKVSAINGETVAAV
        DEAKEKYSKKGPSGPTAVTKVSAINGETVAAV
Subjt:  DEAKEKYSKKGPSGPTAVTKVSAINGETVAAV

A0A6J1JTL9 uncharacterized protein LOC1114874003.7e-6799.23Show/hide
Query:  PPPKRLPIKRSSSEKEILFDVAEPPPIESPNTAYDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQDE
        PPPKRLPIKRSSSEKEILFDVAEPPPIESPNT+YDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQDE
Subjt:  PPPKRLPIKRSSSEKEILFDVAEPPPIESPNTAYDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQDE

Query:  AKEKYSKKGPSGPTAVTKVSAINGETVAAV
        AKEKYSKKGPSGPTAVTKVSAINGETVAAV
Subjt:  AKEKYSKKGPSGPTAVTKVSAINGETVAAV

SwissProt top hitse value%identityAlignment
F4JW68 FCS-Like Zinc finger 78.1e-1147.89Show/hide
Query:  YDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQDEAKEK
        Y  R LS ++ + N R        S  L  C  C+R L  GRDIYMYKG++AFCS ECR+QQM  DE K +
Subjt:  YDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQDEAKEK

Q8VY80 FCS-Like Zinc finger 56.6e-2145.45Show/hide
Query:  KRLPIKRSSSEKEILFDVAEPPPIESPN----------------TAYDHRLLSMLSPR-NNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAF
        +R PIKR++S  EI FD+ +P   E  +                   D RLL+M+SPR   RRHS ++  S   LR+C LC+R LV GRDIYMY+G+ AF
Subjt:  KRLPIKRSSSEKEILFDVAEPPPIESPN----------------TAYDHRLLSMLSPR-NNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAF

Query:  CSAECRQQQMNQDEAKEKYSKKGPSGPTAVTKVSAINGETVAA
        CS ECRQQQ+  DE KEK  KKG    T V       GE V+A
Subjt:  CSAECRQQQMNQDEAKEKYSKKGPSGPTAVTKVSAINGETVAA

Q8VZM9 FCS-Like Zinc finger 26.2e-1138.61Show/hide
Query:  SEKEILFDVAEPPPIESPNTAY---DHRLLSMLSPRNNRRHSDEFPWS------SQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQDEAKE
        S  E+   V+ P     P + Y    H   S+ SPR+ + H   F  S         L +C LC++RL   RDI+MY+G++ FCS ECR++Q+ +DEAKE
Subjt:  SEKEILFDVAEPPPIESPNTAY---DHRLLSMLSPRNNRRHSDEFPWS------SQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQDEAKE

Query:  K
        K
Subjt:  K

Q9FGQ9 FCS-Like Zinc finger 12.4e-1038.39Show/hide
Query:  AYDHRLLSMLSPR---NNRRHSDEFPWSSQH-LRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQDEAKEK-----------YSKKGPSGPTAVT
        +Y +   S+ SPR   + R H   F     H L +C LC++ L   RDIYMY+G++ FCS ECRQ+Q+ +DEAKEK             +K  S PT   
Subjt:  AYDHRLLSMLSPR---NNRRHSDEFPWSSQH-LRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQDEAKEK-----------YSKKGPSGPTAVT

Query:  KVSAINGETVAA
          +  NG   AA
Subjt:  KVSAINGETVAA

Q9SGZ8 FCS-Like Zinc finger 62.3e-2142.95Show/hide
Query:  KRLPIKRSSSEKEILFDV-----AEPPPIESPNTA--------------------YDHRLLSMLSPRNN-RRHSDEFPWSSQHLRACCLCRRRLVSGRDI
        +R PI R++S  EI FD+     +EP   + P  A                     D RLLSM++PR N RRHS +F  +   LR+C LC R LV GRDI
Subjt:  KRLPIKRSSSEKEILFDV-----AEPPPIESPNTA--------------------YDHRLLSMLSPRNN-RRHSDEFPWSSQHLRACCLCRRRLVSGRDI

Query:  YMYKGESAFCSAECRQQQMNQDEAKEKYSKKGPSGPTAVT---KVSAINGETVAAV
        YMY+G+ AFCS+ECRQ+QM QDE KEK     P+   AVT   +     G   AAV
Subjt:  YMYKGESAFCSAECRQQQMNQDEAKEKYSKKGPSGPTAVT---KVSAINGETVAAV

Arabidopsis top hitse value%identityAlignment
AT1G22160.1 Protein of unknown function (DUF581)4.7e-2245.45Show/hide
Query:  KRLPIKRSSSEKEILFDVAEPPPIESPN----------------TAYDHRLLSMLSPR-NNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAF
        +R PIKR++S  EI FD+ +P   E  +                   D RLL+M+SPR   RRHS ++  S   LR+C LC+R LV GRDIYMY+G+ AF
Subjt:  KRLPIKRSSSEKEILFDVAEPPPIESPN----------------TAYDHRLLSMLSPR-NNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAF

Query:  CSAECRQQQMNQDEAKEKYSKKGPSGPTAVTKVSAINGETVAA
        CS ECRQQQ+  DE KEK  KKG    T V       GE V+A
Subjt:  CSAECRQQQMNQDEAKEKYSKKGPSGPTAVTKVSAINGETVAA

AT1G78020.1 Protein of unknown function (DUF581)1.6e-2242.95Show/hide
Query:  KRLPIKRSSSEKEILFDV-----AEPPPIESPNTA--------------------YDHRLLSMLSPRNN-RRHSDEFPWSSQHLRACCLCRRRLVSGRDI
        +R PI R++S  EI FD+     +EP   + P  A                     D RLLSM++PR N RRHS +F  +   LR+C LC R LV GRDI
Subjt:  KRLPIKRSSSEKEILFDV-----AEPPPIESPNTA--------------------YDHRLLSMLSPRNN-RRHSDEFPWSSQHLRACCLCRRRLVSGRDI

Query:  YMYKGESAFCSAECRQQQMNQDEAKEKYSKKGPSGPTAVT---KVSAINGETVAAV
        YMY+G+ AFCS+ECRQ+QM QDE KEK     P+   AVT   +     G   AAV
Subjt:  YMYKGESAFCSAECRQQQMNQDEAKEKYSKKGPSGPTAVT---KVSAINGETVAAV

AT4G17670.1 Protein of unknown function (DUF581)4.4e-1238.61Show/hide
Query:  SEKEILFDVAEPPPIESPNTAY---DHRLLSMLSPRNNRRHSDEFPWS------SQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQDEAKE
        S  E+   V+ P     P + Y    H   S+ SPR+ + H   F  S         L +C LC++RL   RDI+MY+G++ FCS ECR++Q+ +DEAKE
Subjt:  SEKEILFDVAEPPPIESPNTAY---DHRLLSMLSPRNNRRHSDEFPWS------SQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQDEAKE

Query:  K
        K
Subjt:  K

AT4G39795.1 Protein of unknown function (DUF581)5.8e-1247.89Show/hide
Query:  YDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQDEAKEK
        Y  R LS ++ + N R        S  L  C  C+R L  GRDIYMYKG++AFCS ECR+QQM  DE K +
Subjt:  YDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQDEAKEK

AT5G47060.1 Protein of unknown function (DUF581)1.7e-1138.39Show/hide
Query:  AYDHRLLSMLSPR---NNRRHSDEFPWSSQH-LRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQDEAKEK-----------YSKKGPSGPTAVT
        +Y +   S+ SPR   + R H   F     H L +C LC++ L   RDIYMY+G++ FCS ECRQ+Q+ +DEAKEK             +K  S PT   
Subjt:  AYDHRLLSMLSPR---NNRRHSDEFPWSSQH-LRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQDEAKEK-----------YSKKGPSGPTAVT

Query:  KVSAINGETVAA
          +  NG   AA
Subjt:  KVSAINGETVAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCCGCCGCCAAAGAGGCTCCCAATCAAGAGATCCTCCAGCGAGAAGGAGATCCTCTTCGACGTCGCAGAACCTCCACCAATCGAAAGCCCTAACACCGCCTACGA
TCACCGCCTTCTCTCCATGCTGTCGCCGAGAAACAATCGGAGACATTCCGATGAGTTTCCTTGGTCGTCTCAGCATCTCCGTGCTTGTTGCCTCTGCCGCCGCCGCCTCG
TTTCCGGCCGTGACATATACATGTACAAGGGCGAGAGCGCTTTTTGTAGTGCAGAGTGCCGGCAGCAGCAGATGAATCAGGATGAGGCGAAGGAAAAGTATTCGAAGAAA
GGACCGTCAGGACCGACCGCCGTAACAAAAGTCTCTGCAATTAATGGCGAGACTGTCGCCGCCGTGTAG
mRNA sequenceShow/hide mRNA sequence
CACTTTCTCTCTCTAACGTCGCCGGAAAACCAATATGCCGCCGCCGCCAAAGAGGCTCCCAATCAAGAGATCCTCCAGCGAGAAGGAGATCCTCTTCGACGTCGCAGAAC
CTCCACCAATCGAAAGCCCTAACACCGCCTACGATCACCGCCTTCTCTCCATGCTGTCGCCGAGAAACAATCGGAGACATTCCGATGAGTTTCCTTGGTCGTCTCAGCAT
CTCCGTGCTTGTTGCCTCTGCCGCCGCCGCCTCGTTTCCGGCCGTGACATATACATGTACAAGGGCGAGAGCGCTTTTTGTAGTGCAGAGTGCCGGCAGCAGCAGATGAA
TCAGGATGAGGCGAAGGAAAAGTATTCGAAGAAAGGACCGTCAGGACCGACCGCCGTAACAAAAGTCTCTGCAATTAATGGCGAGACTGTCGCCGCCGTGTAGCCGCCAT
AGATTACTTCAGATTTAAAGCAGCCGCCACCGCTCCAGCCTTCTATCAACGCATATAAATATAATATATATATATATAAATATAAAGATGTTTCTGCGTACTTAAATGGG
GTAACAAATTTTGGAGCTGCTGTATGTGAATGTGAATATTACCCTCTAA
Protein sequenceShow/hide protein sequence
MPPPPKRLPIKRSSSEKEILFDVAEPPPIESPNTAYDHRLLSMLSPRNNRRHSDEFPWSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQDEAKEKYSKK
GPSGPTAVTKVSAINGETVAAV