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Carg18247 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18247
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:18115354..18116315
RNA-Seq ExpressionCarg18247
SyntenyCarg18247
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602053.1 Aggrecan core protein, partial [Cucurbita argyrosperma subsp. sororia]5.4e-28100Show/hide
Query:  HSIGIWPLKHPSSSSKRRRPHYSIQCQKASISEFSPIIKQSPKFVASLSMWSDESGMLQRNEGG
        HSIGIWPLKHPSSSSKRRRPHYSIQCQKASISEFSPIIKQSPKFVASLSMWSDESGMLQRNEGG
Subjt:  HSIGIWPLKHPSSSSKRRRPHYSIQCQKASISEFSPIIKQSPKFVASLSMWSDESGMLQRNEGG
KAG7032747.1 hypothetical protein SDJN02_06797, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-36100Show/hide
Query:  HSIGIWPLKHPSSSSKRRRPHYSIQCQKASISEFSPIIKQSPKFVASLSMWSDESGMLQRNEGGKISTHRNTFSISFC
        HSIGIWPLKHPSSSSKRRRPHYSIQCQKASISEFSPIIKQSPKFVASLSMWSDESGMLQRNEGGKISTHRNTFSISFC
Subjt:  HSIGIWPLKHPSSSSKRRRPHYSIQCQKASISEFSPIIKQSPKFVASLSMWSDESGMLQRNEGGKISTHRNTFSISFC
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CACTCAATTGGAATCTGGCCGCTAAAACATCCAAGTTCATCGTCGAAGCGTCGGCGGCCACATTACTCTATTCAGTGCCAAAAGGCTTCAATTTCCGAGTTTTCGCCAAT
AATCAAACAGAGCCCTAAGTTTGTGGCATCGCTTTCGATGTGGAGCGACGAATCGGGAATGTTGCAGAGAAATGAAGGCGGTAAGATTTCGACACATCGAAACACCTTTT
CGATTTCCTTTTGTTAG
mRNA sequenceShow/hide mRNA sequence
CACTCAATTGGAATCTGGCCGCTAAAACATCCAAGTTCATCGTCGAAGCGTCGGCGGCCACATTACTCTATTCAGTGCCAAAAGGCTTCAATTTCCGAGTTTTCGCCAAT
AATCAAACAGAGCCCTAAGTTTGTGGCATCGCTTTCGATGTGGAGCGACGAATCGGGAATGTTGCAGAGAAATGAAGGCGGTAAGATTTCGACACATCGAAACACCTTTT
CGATTTCCTTTTGTTAGCAGAAAGATTGCAATAGATTAGAATAGCGGAATTTTTGGATATTTGATTTCTTTTTTAAAGAGGAAGTGTGTGGATTTGTTCGTTGCATTGAA
TGTGGACGGAATTTGAGCTATCTTCTCAAATCTTACAGTTGTTTGTGTACTGATTATAAATTAATTTAGGAATAGGAGGATCCTTCCTTCGAAAAGAAACCCTAGAAGCC
ATCGAGTGTGGAAAAGGGGGGAAACTGGTTATGGACTTGAACGATAATGGGATATTTCTTTTACTTTTTTTAGTTCTATTCTCTTTTTGCATTTCTTTTCAATAAAGTAA
TGGAGAACTTATGAACCTTTTCCTACTTTCCTGTACTTTTTTCTTCATGGTTTCCTGACTGAGCAAAAGTGCCCCAAGTGCGATTTGTTGAGCTATTGAACTCCTCCACT
ATGGATGGTTTGCAGGAGGAGCTGGGAAAATAAGACATGTAGTCTCTTTTTACCATTCATTATTGAGCTACAAACCCAACCATGGTGGCCATGGCCATGTTTTTGGGTTT
TGATTTGCATGGCTAGTTAGATAGAGGATAACTCTAACCAAGCCCATATTGTCCTCTTTGAACTTTCTCTTTCGGACTTTTTCTCAAGATTTTTAAAATGCGTCTACTA
Protein sequenceShow/hide protein sequence
HSIGIWPLKHPSSSSKRRRPHYSIQCQKASISEFSPIIKQSPKFVASLSMWSDESGMLQRNEGGKISTHRNTFSISFC