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Carg18249 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18249
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDFRP_C domain-containing protein
Genome locationCarg_Chr04:18099268..18101231
RNA-Seq ExpressionCarg18249
SyntenyCarg18249
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0005829 - cytosol (cellular component)
InterPro domainsIPR032378 - ZC3H15/TMA46 family, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141384.1 zinc finger CCCH domain-containing protein 15 homolog [Momordica charantia]1.0e-2987.65Show/hide
Query:  MGAEE--AAVEQEKLASHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        MGAEE  AA+E+EKL SH+P  NPITEAQFLSWKR KDAEASAKRDETARKRAEDIA+GAVQMNGRELFLHQPWVFDNTQY
Subjt:  MGAEE--AAVEQEKLASHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
XP_022939418.1 zinc finger CCCH domain-containing protein 15 homolog [Cucurbita moschata]2.9e-2987.34Show/hide
Query:  MGAEEAAVEQEKLASHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        MGAEEAA+EQEKLAS +P   PITE QFLSWKR KDAEASAKRDETARKRA+DIASGAVQMNGRELFLHQPWVFDN+QY
Subjt:  MGAEEAAVEQEKLASHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
XP_022963450.1 zinc finger CCCH domain-containing protein 15 homolog [Cucurbita moschata]3.9e-3496.2Show/hide
Query:  MGAEEAAVEQEKLASHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        MGAEEA VE+EKL+SHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
Subjt:  MGAEEAAVEQEKLASHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
XP_022990599.1 zinc finger CCCH domain-containing protein 15 homolog [Cucurbita maxima]2.1e-35100Show/hide
Query:  MGAEEAAVEQEKLASHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        MGAEEAAVEQEKLASHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
Subjt:  MGAEEAAVEQEKLASHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
XP_038906768.1 zinc finger CCCH domain-containing protein 15 homolog [Benincasa hispida]2.5e-2888.61Show/hide
Query:  MGAEEAAVEQEKLASHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        MGA E A EQEK ASH+P   PITEAQFLSWKR KDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
Subjt:  MGAEEAAVEQEKLASHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
TrEMBL top hitse value%identityAlignment
A0A6J1CIH3 zinc finger CCCH domain-containing protein 15 homolog4.9e-3087.65Show/hide
Query:  MGAEE--AAVEQEKLASHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        MGAEE  AA+E+EKL SH+P  NPITEAQFLSWKR KDAEASAKRDETARKRAEDIA+GAVQMNGRELFLHQPWVFDNTQY
Subjt:  MGAEE--AAVEQEKLASHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
A0A6J1FLL2 zinc finger CCCH domain-containing protein 15 homolog1.4e-2987.34Show/hide
Query:  MGAEEAAVEQEKLASHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        MGAEEAA+EQEKLAS +P   PITE QFLSWKR KDAEASAKRDETARKRA+DIASGAVQMNGRELFLHQPWVFDN+QY
Subjt:  MGAEEAAVEQEKLASHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
A0A6J1HI11 zinc finger CCCH domain-containing protein 15 homolog1.9e-3496.2Show/hide
Query:  MGAEEAAVEQEKLASHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        MGAEEA VE+EKL+SHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
Subjt:  MGAEEAAVEQEKLASHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
A0A6J1JSG7 zinc finger CCCH domain-containing protein 15 homolog1.0e-35100Show/hide
Query:  MGAEEAAVEQEKLASHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        MGAEEAAVEQEKLASHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
Subjt:  MGAEEAAVEQEKLASHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
A0A6J1JUQ1 zinc finger CCCH domain-containing protein 15 homolog1.6e-2886.08Show/hide
Query:  MGAEEAAVEQEKLASHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        M AEEAA+EQEKLAS +P   PITE QFLSWKR KDAEASAKRDETARKRA+DIASGAVQMNGRELFLHQPWVFDN+QY
Subjt:  MGAEEAAVEQEKLASHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22140.1 unknown protein2.7e-1766.13Show/hide
Query:  PSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        P+   I++ QFL+WKR KDAE  AK+ E ARKR EDIASG V MNGRELFLH+PWVFD+T +
Subjt:  PSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
AT1G22140.2 unknown protein4.8e-0662.5Show/hide
Query:  PSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASG
        P+   I++ QFL+WKR KDAE  AK+ E ARKR EDIASG
Subjt:  PSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCAGAAGAAGCGGCTGTGGAGCAAGAGAAGCTCGCGTCTCATGATCCGAGCGCGAATCCCATCACGGAGGCTCAGTTCCTATCGTGGAAGCGCCACAAGGATGC
CGAGGCATCTGCTAAAAGAGATGAAACAGCAAGGAAGCGTGCGGAGGATATAGCCTCAGGAGCGGTGCAAATGAATGGGCGAGAGCTTTTCTTGCACCAACCGTGGGTTT
TTGACAACACTCAATATTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAGTTAATCCAATTTTATTTCCTATATTTATTATTTATTTAGTTTAAATTTTACACTCTCTCCATCTCGAATATAACAGAGGTTGAAGCAGCAATCCATTGGA
GAGGGGCTATCAAATCCAGGAATCTGATCTACGCTCAACAAAATGGGGGCAGAAGAAGCGGCTGTGGAGCAAGAGAAGCTCGCGTCTCATGATCCGAGCGCGAATCCCAT
CACGGAGGCTCAGTTCCTATCGTGGAAGCGCCACAAGGATGCCGAGGCATCTGCTAAAAGAGATGAAACAGCAAGGAAGCGTGCGGAGGATATAGCCTCAGGAGCGGTGC
AAATGAATGGGCGAGAGCTTTTCTTGCACCAACCGTGGGTTTTTGACAACACTCAATATTGAGGTTGGTGTTTTAGTTTAGTACCACTTTCTGTTGTTTCTTGAGAAATG
TCTGTCCTTTAAAATGCTACCTTGTATTTTAATCAGCATATCCTTCATACAAAGCATTAGTTCTTACGCCCAAAATGCTATCCTCATATATGAATCTGTGCAAAAGGAAT
GACTTGACCCAATTGGTTCTAGACAAAGATGTATATCCAAATATAGGCGCTAATTTGTCCTATGCTGTTAGCCTCATATGAACTTTATGATATGCATTTGTCTTCTCTAG
TTTACAAATCACGTGTTAACAAAATGTTGTGTTTTTTCCTTTACTAGGTCCTTACATGATGAAATGTTTTTCATGTGGGAATAAAAATCATGATGTGTAGTGTCCATTGT
TATAGGCGCTACTTTACTTAGTGCAATCGTGCGTACCCAAGTGTAACGAATCGATTTTCTTTTGTGAACGTACTGGTCTAAGCTGAGCTTACTTATAAATTGTTTTGTAA
TTTAAAAACAAATGAAAGAATACCCATAGATAGCAAAGTAAAATCATC
Protein sequenceShow/hide protein sequence
MGAEEAAVEQEKLASHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY