; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg18257 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18257
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCENP-V/GFA domain-containing protein
Genome locationCarg_Chr04:18061771..18062157
RNA-Seq ExpressionCarg18257
SyntenyCarg18257
Gene Ontology termsGO:0016846 - carbon-sulfur lyase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006913 - CENP-V/GFA domain
IPR011057 - Mss4-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062377.1 centromere protein V isoform X5 [Cucumis melo var. makuwa]1.6e-5681.82Show/hide
Query:  KMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVD
        KMV+H GGCHCKRIRWEVEAA+SV AW+CNCS+C MRGNTHFTVP+  F LLGDS  F+STYTFGTH A HTFCKVCGITSFYHSRSTPDGVSV+FRCVD
Subjt:  KMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVD

Query:  PGTLAHVEIKKFDGENWEAAH
        PGTL HV+I KFDG NWE AH
Subjt:  PGTLAHVEIKKFDGENWEAAH

KAG6602043.1 Centromere protein V, partial [Cucurbita argyrosperma subsp. sororia]1.7e-63100Show/hide
Query:  MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR
        MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR
Subjt:  MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR

Query:  CVDPGTLAHVEIK
        CVDPGTLAHVEIK
Subjt:  CVDPGTLAHVEIK

KAG7032737.1 Centromere protein V, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-73100Show/hide
Query:  MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR
        MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR
Subjt:  MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR

Query:  CVDPGTLAHVEIKKFDGENWEAAHRRRQ
        CVDPGTLAHVEIKKFDGENWEAAHRRRQ
Subjt:  CVDPGTLAHVEIKKFDGENWEAAHRRRQ

XP_022999779.1 centromere protein V-like [Cucurbita maxima]2.5e-5474.19Show/hide
Query:  MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR
        MD ++V+H GGCHCK++RW VEA ASV AW+CNCSDC MR NTHF VP  RFKLLGDS  F+STYTFGTH A HTFCKVCGITSFYH RS PDGV++TF+
Subjt:  MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR

Query:  CVDPGTLAHVEIKKFDGENWEAAH
        CVDPGTLA+VEI++FDG NWEA++
Subjt:  CVDPGTLAHVEIKKFDGENWEAAH

XP_023546052.1 centromere protein V [Cucurbita pepo subsp. pepo]4.2e-5474.19Show/hide
Query:  MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR
        MD ++V H GGCHCK++RW VEA ASV AW+CNCSDC MR NTHF VP  RFKLLGDS  F+STYTFGTH A HTFCKVCGITSFYH RS PDGV++TF+
Subjt:  MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR

Query:  CVDPGTLAHVEIKKFDGENWEAAH
        CVDPGTL HVEI++FDG NWEA++
Subjt:  CVDPGTLAHVEIKKFDGENWEAAH

TrEMBL top hitse value%identityAlignment
A0A059BUT9 CENP-V/GFA domain-containing protein2.3e-5370.97Show/hide
Query:  MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR
        M+ ++++H GGCHC+R+RWEVEA  SV AW+CNCSDC MRGN HF VP+ RFKLLG+SD++++TYTFGTH A HTFCKVCGITSFY  RS PDG++VT+R
Subjt:  MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR

Query:  CVDPGTLAHVEIKKFDGENWEAAH
        CVDPGTLAHVEIK+FDG+NWE+++
Subjt:  CVDPGTLAHVEIKKFDGENWEAAH

A0A0A0KN47 CENP-V/GFA domain-containing protein1.2e-5782.64Show/hide
Query:  KMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVD
        +MV+H GGCHCKRIRWEVEAA+SV AW+CNCS+C MRGNTHFTVP+  FKLLGDSD F+STYTFGTH A HTFCKVCGITSFYHSRSTPDGVSV+FRCVD
Subjt:  KMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVD

Query:  PGTLAHVEIKKFDGENWEAAH
        PGTL HV+I KFDG NWE AH
Subjt:  PGTLAHVEIKKFDGENWEAAH

A0A5A7V607 Centromere protein V isoform X57.6e-5781.82Show/hide
Query:  KMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVD
        KMV+H GGCHCKRIRWEVEAA+SV AW+CNCS+C MRGNTHFTVP+  F LLGDS  F+STYTFGTH A HTFCKVCGITSFYHSRSTPDGVSV+FRCVD
Subjt:  KMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVD

Query:  PGTLAHVEIKKFDGENWEAAH
        PGTL HV+I KFDG NWE AH
Subjt:  PGTLAHVEIKKFDGENWEAAH

A0A6J1G4E1 centromere protein V-like3.5e-5473.39Show/hide
Query:  MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR
        MD ++V+H GGCHCK +RW VEA  SV AW+CNCSDC MR NTHF VP  RFKLLGDS  F+STYTFGTH A HTFCKVCGITSFYH RS PDGV++TF+
Subjt:  MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR

Query:  CVDPGTLAHVEIKKFDGENWEAAH
        CVDPGTL HVEI++FDG NWEA++
Subjt:  CVDPGTLAHVEIKKFDGENWEAAH

A0A6J1KE30 centromere protein V-like1.2e-5474.19Show/hide
Query:  MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR
        MD ++V+H GGCHCK++RW VEA ASV AW+CNCSDC MR NTHF VP  RFKLLGDS  F+STYTFGTH A HTFCKVCGITSFYH RS PDGV++TF+
Subjt:  MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR

Query:  CVDPGTLAHVEIKKFDGENWEAAH
        CVDPGTLA+VEI++FDG NWEA++
Subjt:  CVDPGTLAHVEIKKFDGENWEAAH

SwissProt top hitse value%identityAlignment
A0A0U1RR11 Centromere protein V-like protein 11.8e-1840.71Show/hide
Query:  MVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDP
        +V H GGCHC  +R+ V A A +   +C+C  C  + + HF VPA+RF LL  ++  V TY   TH A H+FC  CG+ SF+ + S P    V   C+D 
Subjt:  MVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDP

Query:  GTLAHVEIKKFDG
        GT+  V I++  G
Subjt:  GTLAHVEIKKFDG

A0A0U1RRI6 Centromere protein V-like protein 31.8e-1840.71Show/hide
Query:  MVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDP
        +V H GGCHC  +R+ V A A +   +C+C  C  + + HF VPA+RF LL  ++  V TY   TH A H+FC  CG+ SF+ + S P    V   C+D 
Subjt:  MVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDP

Query:  GTLAHVEIKKFDG
        GT+  V I++  G
Subjt:  GTLAHVEIKKFDG

P0DPI3 Centromere protein V-like protein 21.8e-1840.71Show/hide
Query:  MVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDP
        +V H GGCHC  +R+ V A A +   +C+C  C  + + HF VPA+RF LL  ++  V TY   TH A H+FC  CG+ SF+ + S P    V   C+D 
Subjt:  MVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDP

Query:  GTLAHVEIKKFDG
        GT+  V I++  G
Subjt:  GTLAHVEIKKFDG

Q7Z7K6 Centromere protein V7.6e-3046.77Show/hide
Query:  MVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDP
        +V H GGCHC  +R+EV A+A +  ++CNCS C  + N HF VPA+RFKLL  ++  ++TYTF TH A HTFCK CG+ SFY  RS P G  +   C+D 
Subjt:  MVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDP

Query:  GTLAHVEIKKFDGENWEAAHRRRQ
        GT+  +  ++F+G +WE A +  +
Subjt:  GTLAHVEIKKFDGENWEAAHRRRQ

Q9CXS4 Centromere protein V2.0e-3047.58Show/hide
Query:  MVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDP
        +V H GGCHC  +R+EV A+A +  ++CNCS C  + N HF VPA+RFKLL  ++  ++TYTF TH A HTFCK CG+ SFY  RS P G  +   C+D 
Subjt:  MVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDP

Query:  GTLAHVEIKKFDGENWEAAHRRRQ
        GT+  V  ++F+G +WE A +  +
Subjt:  GTLAHVEIKKFDGENWEAAHRRRQ

Arabidopsis top hitse value%identityAlignment
AT5G16940.1 carbon-sulfur lyases2.1e-5163.49Show/hide
Query:  MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR
        M+ +++ H+GGCHC +I+W V+AA SV AW CNCSDC MRGN HF VP++ F+LL DS  F++TYTFGTH A HTFCKVCGITSFY  RS PDGV+VT +
Subjt:  MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR

Query:  CVDPGTLAHVEIKKFDGENWEAAHRR
        CV  GTLAH+E+K +DG+NWE +H++
Subjt:  CVDPGTLAHVEIKKFDGENWEAAHRR

AT5G16940.2 carbon-sulfur lyases2.1e-5163.49Show/hide
Query:  MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR
        M+ +++ H+GGCHC +I+W V+AA SV AW CNCSDC MRGN HF VP++ F+LL DS  F++TYTFGTH A HTFCKVCGITSFY  RS PDGV+VT +
Subjt:  MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR

Query:  CVDPGTLAHVEIKKFDGENWEAAHRR
        CV  GTLAH+E+K +DG+NWE +H++
Subjt:  CVDPGTLAHVEIKKFDGENWEAAHRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGTAAGATGGTGATACACAAAGGCGGCTGCCACTGCAAGAGAATAAGATGGGAGGTGGAAGCAGCGGCCAGTGTGACAGCTTGGGAGTGCAATTGTTCGGACTG
CTGCATGAGAGGCAACACCCATTTCACTGTGCCGGCTGCAAGGTTCAAGCTTTTAGGAGACTCCGACAAGTTCGTTTCCACCTACACTTTTGGGACCCATATTGCCAACC
ACACGTTTTGCAAAGTTTGTGGGATCACTTCCTTTTACCATTCGCGATCAACCCCAGATGGGGTTTCGGTTACTTTTAGATGTGTTGATCCTGGGACGTTGGCCCATGTT
GAGATTAAGAAGTTTGATGGCGAAAATTGGGAGGCAGCTCATCGTCGTCGACAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTGTAAGATGGTGATACACAAAGGCGGCTGCCACTGCAAGAGAATAAGATGGGAGGTGGAAGCAGCGGCCAGTGTGACAGCTTGGGAGTGCAATTGTTCGGACTG
CTGCATGAGAGGCAACACCCATTTCACTGTGCCGGCTGCAAGGTTCAAGCTTTTAGGAGACTCCGACAAGTTCGTTTCCACCTACACTTTTGGGACCCATATTGCCAACC
ACACGTTTTGCAAAGTTTGTGGGATCACTTCCTTTTACCATTCGCGATCAACCCCAGATGGGGTTTCGGTTACTTTTAGATGTGTTGATCCTGGGACGTTGGCCCATGTT
GAGATTAAGAAGTTTGATGGCGAAAATTGGGAGGCAGCTCATCGTCGTCGACAATAA
Protein sequenceShow/hide protein sequence
MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHV
EIKKFDGENWEAAHRRRQ