CuGenDBv2

Gene ID	Carg18278
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Voltage-dependent L-type calcium channel subunit
Genome location	Carg_Chr04:17922749..17926840
RNA-Seq Expression	Carg18278
Synteny	Carg18278
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6602021.1 hypothetical protein SDJN03_07254, partial [Cucurbita argyrosperma subsp. sororia]

2.0e-107

100

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Query:  MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPSVEKACRNIGRDVLCWTRRGSPLRALLVI
        MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPSVEKACRNIGRDVLCWTRRGSPLRALLVI
Subjt:  MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPSVEKACRNIGRDVLCWTRRGSPLRALLVI

Query:  SVGTIALLALTGLLIFLLFFLAATFNAIVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIA
        SVGTIALLALTGLLIFLLFFLAATFNAIVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIA
Subjt:  SVGTIALLALTGLLIFLLFFLAATFNAIVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIA

Query:  KQSMSAGSSAISAFSHARRAHKD
        KQSMSAGSSAISAFSHARRAHKD
Subjt:  KQSMSAGSSAISAFSHARRAHKD

XP_022922733.1 uncharacterized protein LOC111430635 [Cucurbita moschata]

2.9e-106

98.21

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Query:  MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPSVEKACRNIGRDVLCWTRRGSPLRALLVI
        MAEKYDSDDRNGTVPV+EQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGP+VEKACRNIGRDVLCWTRRGSPLRALLVI
Subjt:  MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPSVEKACRNIGRDVLCWTRRGSPLRALLVI

Query:  SVGTIALLALTGLLIFLLFFLAATFNAIVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIA
        SVGTIALLALTGLLIFLLFFLAATFNA+VISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLA+RKSFGIA
Subjt:  SVGTIALLALTGLLIFLLFFLAATFNAIVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIA

Query:  KQSMSAGSSAISAFSHARRAHKD
        KQSMSAGSSAISAFSHARRAHKD
Subjt:  KQSMSAGSSAISAFSHARRAHKD

XP_022990837.1 uncharacterized protein LOC111487608 [Cucurbita maxima]

5.6e-102

95.07

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Query:  MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPSVEKACRNIGRDVLCWTRRGSPLRALLVI
        MAEKYDSDDRNGTVPV+EQ+RTSHKSKG+++ D+TVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGP+VEKACRNIG DVLCWTRRGSPLRALLVI
Subjt:  MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPSVEKACRNIGRDVLCWTRRGSPLRALLVI

Query:  SVGTIALLALTGLLIFLLFFLAATFNAIVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIA
        SVGTIALLALTGLLIFLLFFLAATFNA+VISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIA
Subjt:  SVGTIALLALTGLLIFLLFFLAATFNAIVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIA

Query:  KQSMSAGSSAISAFSHARRAHKD
        KQSMSAGSS ISAFSHARRAHKD
Subjt:  KQSMSAGSSAISAFSHARRAHKD

XP_023514904.1 uncharacterized protein LOC111779077 [Cucurbita pepo subsp. pepo]

1.7e-106

98.65

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Query:  MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPSVEKACRNIGRDVLCWTRRGSPLRALLVI
        MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMD+TVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGP+VEKACRNIGRDVLCWTRRGSPLRALLVI
Subjt:  MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPSVEKACRNIGRDVLCWTRRGSPLRALLVI

Query:  SVGTIALLALTGLLIFLLFFLAATFNAIVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIA
        SVGTIALLALTGLLIFLLFFLAATFNA+VISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIA
Subjt:  SVGTIALLALTGLLIFLLFFLAATFNAIVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIA

Query:  KQSMSAGSSAISAFSHARRAHKD
        KQSMSAGSSAISAFSHARRAHKD
Subjt:  KQSMSAGSSAISAFSHARRAHKD

XP_038906498.1 uncharacterized protein LOC120092475 [Benincasa hispida]

2.3e-87

82.06

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Query:  MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPSVEKACRNIGRDVLCWTRRGSPLRALLVI
        MAE YDSDDRN T PVEE+D +SH+SKGV   D TVYE LRRLI E+F PD+ KGSSLFQRVKVS+ ENGP+V +ACRN GRDVLCWTRRGSPLRALLVI
Subjt:  MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPSVEKACRNIGRDVLCWTRRGSPLRALLVI

Query:  SVGTIALLALTGLLIFLLFFLAATFNAIVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIA
        SVGTI LLALTG LIFLLFFLAAT NAI+ISLLVSLAAVGGFLALFFAC+TA+YIGAL VALFVISTATISAIV VVIAAGW+GFFCVVWLA+RKSFG+A
Subjt:  SVGTIALLALTGLLIFLLFFLAATFNAIVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIA

Query:  KQSMSAGSSAISAFSHARRAHKD
        K+S++A +SAISAFS+ARRAHKD
Subjt:  KQSMSAGSSAISAFSHARRAHKD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KNC3 Uncharacterized protein

6.7e-85

81.17

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Query:  MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPSVEKACRNIGRDVLCWTRRGSPLRALLVI
        MAE +DSDDRN TVPVEE+D +SH+SKGV   D+TVYE LRRLIAE+F PD+ KG SLF RVKVS+T+NGP+V +ACRN GRDVL WTRRGSPLRALLVI
Subjt:  MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPSVEKACRNIGRDVLCWTRRGSPLRALLVI

Query:  SVGTIALLALTGLLIFLLFFLAATFNAIVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIA
        SVGTI LLA+TG LIFL FFLAAT NAI+ISLLVSLAAVGGFLALFFAC+TA+Y+GAL VALFVISTATISAIVAVVIAAGWIGFFC+VWLAIRKSFG+A
Subjt:  SVGTIALLALTGLLIFLLFFLAATFNAIVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIA

Query:  KQSMSAGSSAISAFSHARRAHKD
        K+S+SA +SAISAFS+ARRAHKD
Subjt:  KQSMSAGSSAISAFSHARRAHKD

A0A5A7V6K3 Uncharacterized protein

3.8e-80

78.92

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Query:  MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPSVEKACRNIGRDVLCWTRRGSPLRALLVI
        MAE +DSD RN TVPVEE+D +SH+SKG+   D+TVYE LRRLIAE+F PD+ KG SLF RVKVS+ +NGP+V +ACRN G DVL WTRRGSPLRALLVI
Subjt:  MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPSVEKACRNIGRDVLCWTRRGSPLRALLVI

Query:  SVGTIALLALTGLLIFLLFFLAATFNAIVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIA
        SVGTI LLA+TG LIFLLFFLAAT NAI+ISLLVSLAAVGGFLALFFAC+TA+Y+GAL VALFVISTATISAIVAVVIAAGWIGFF +VWLAI KSFG+A
Subjt:  SVGTIALLALTGLLIFLLFFLAATFNAIVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIA

Query:  KQSMSAGSSAISAFSHARRAHKD
        K+S+SA +SAISAFS+ARRAHKD
Subjt:  KQSMSAGSSAISAFSHARRAHKD

A0A6J1CIE7 uncharacterized protein LOC111011773

4.6e-86

81.17

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Query:  MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPSVEKACRNIGRDVLCWTRRGSPLRALLVI
        M E YDSDDRNG V VEE+D  S+ SKGV + D+TVYE LRRLIAE+F PD+ KG+SLF RVK+S+ ENGP+V +ACRN+GRDVL WTRRGSPLRALLVI
Subjt:  MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPSVEKACRNIGRDVLCWTRRGSPLRALLVI

Query:  SVGTIALLALTGLLIFLLFFLAATFNAIVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIA
        SVGTIALLALTGLLIFLLFFLAAT NAI+ISLLVSLAAVGGFLALFFAC+TAVYIGALTVA+FVISTAT SAIVAV++A GWIGFFCVVWLA+R+SFG A
Subjt:  SVGTIALLALTGLLIFLLFFLAATFNAIVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIA

Query:  KQSMSAGSSAISAFSHARRAHKD
        KQS+SA SSAISAFS+ARRAHKD
Subjt:  KQSMSAGSSAISAFSHARRAHKD

A0A6J1E7P4 uncharacterized protein LOC111430635

1.4e-106

98.21

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Query:  MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPSVEKACRNIGRDVLCWTRRGSPLRALLVI
        MAEKYDSDDRNGTVPV+EQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGP+VEKACRNIGRDVLCWTRRGSPLRALLVI
Subjt:  MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPSVEKACRNIGRDVLCWTRRGSPLRALLVI

Query:  SVGTIALLALTGLLIFLLFFLAATFNAIVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIA
        SVGTIALLALTGLLIFLLFFLAATFNA+VISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLA+RKSFGIA
Subjt:  SVGTIALLALTGLLIFLLFFLAATFNAIVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIA

Query:  KQSMSAGSSAISAFSHARRAHKD
        KQSMSAGSSAISAFSHARRAHKD
Subjt:  KQSMSAGSSAISAFSHARRAHKD

A0A6J1JJZ4 uncharacterized protein LOC111487608

2.7e-102

95.07

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Query:  MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPSVEKACRNIGRDVLCWTRRGSPLRALLVI
        MAEKYDSDDRNGTVPV+EQ+RTSHKSKG+++ D+TVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGP+VEKACRNIG DVLCWTRRGSPLRALLVI
Subjt:  MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPSVEKACRNIGRDVLCWTRRGSPLRALLVI

Query:  SVGTIALLALTGLLIFLLFFLAATFNAIVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIA
        SVGTIALLALTGLLIFLLFFLAATFNA+VISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIA
Subjt:  SVGTIALLALTGLLIFLLFFLAATFNAIVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIA

Query:  KQSMSAGSSAISAFSHARRAHKD
        KQSMSAGSS ISAFSHARRAHKD
Subjt:  KQSMSAGSSAISAFSHARRAHKD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G16550.1 unknown protein

2.7e-46

56.25

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Query:  RTVYETLRRLIAEVFSPDKAKG--SSLFQRVKVSITENGPSVEKACRNIGRDVLCWTRRGSPLRALLVISVGTIALLALTGLLIFLLFFLAATFNAIVIS
        +++Y  +   I  +  PD   G  SS  +RV+ S+ ENGP + +A    GR++L WTRRGS LRALLVI++GTI LL    L++F LFF+AAT NAI+IS
Subjt:  RTVYETLRRLIAEVFSPDKAKG--SSLFQRVKVSITENGPSVEKACRNIGRDVLCWTRRGSPLRALLVISVGTIALLALTGLLIFLLFFLAATFNAIVIS

Query:  LLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIAKQSMSAGSSAISAFSHARRAHKD
        LL+SLA  GGFLALFF C+T VYIGAL+VA FVISTAT+SA+V+V+IA+GWIGFF  VWL  R S  +AKQS+S   SAIS  + +R  H+D
Subjt:  LLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIAKQSMSAGSSAISAFSHARRAHKD

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGGAGAAGTACGATTCCGATGATCGGAATGGCACCGTGCCGGTTGAAGAACAAGATAGAACCAGTCACAAGTCCAAAGGAGTGTATAATATGGATCGGACAGTTTA
TGAAACCCTCCGCCGTCTGATCGCTGAGGTTTTCTCCCCCGATAAAGCTAAGGGTTCTTCATTGTTCCAGCGCGTTAAGGTCTCCATCACCGAGAATGGCCCTTCCGTTG
AAAAGGCCTGCAGAAACATTGGTCGCGATGTTCTTTGCTGGACTCGCAGGGGCAGTCCTCTTAGAGCACTCCTTGTTATCTCCGTTGGGACAATTGCTCTTCTTGCATTG
ACGGGATTGCTCATCTTTCTGCTATTCTTTCTGGCAGCAACTTTCAACGCCATTGTTATTTCTCTTCTTGTTTCCTTGGCTGCAGTTGGAGGTTTCTTGGCACTTTTCTT
TGCTTGCATAACGGCTGTTTACATCGGAGCATTAACAGTTGCTTTGTTTGTTATATCCACTGCAACAATCTCAGCAATTGTAGCAGTGGTGATCGCCGCAGGTTGGATTG
GGTTCTTCTGTGTGGTATGGCTAGCAATACGAAAAAGTTTTGGTATTGCTAAGCAGTCGATGAGCGCGGGCAGTTCAGCAATTTCAGCATTTTCTCATGCTAGACGTGCC
CACAAAGATTAG

mRNA sequence

Show/hide mRNA sequence

TAATTGCCGGTCAATCAAATGCAACACATCTATCCATCGAAAAGTCGACACCCGAGTTCTGGACTCTGCACACAGTTTCACTATTGATTGATTCACGAGATTCGCCGGAT
CCCCTAAAAAATGGCGGAGAAGTACGATTCCGATGATCGGAATGGCACCGTGCCGGTTGAAGAACAAGATAGAACCAGTCACAAGTCCAAAGGAGTGTATAATATGGATC
GGACAGTTTATGAAACCCTCCGCCGTCTGATCGCTGAGGTTTTCTCCCCCGATAAAGCTAAGGGTTCTTCATTGTTCCAGCGCGTTAAGGTCTCCATCACCGAGAATGGC
CCTTCCGTTGAAAAGGCCTGCAGAAACATTGGTCGCGATGTTCTTTGCTGGACTCGCAGGGGCAGTCCTCTTAGAGCACTCCTTGTTATCTCCGTTGGGACAATTGCTCT
TCTTGCATTGACGGGATTGCTCATCTTTCTGCTATTCTTTCTGGCAGCAACTTTCAACGCCATTGTTATTTCTCTTCTTGTTTCCTTGGCTGCAGTTGGAGGTTTCTTGG
CACTTTTCTTTGCTTGCATAACGGCTGTTTACATCGGAGCATTAACAGTTGCTTTGTTTGTTATATCCACTGCAACAATCTCAGCAATTGTAGCAGTGGTGATCGCCGCA
GGTTGGATTGGGTTCTTCTGTGTGGTATGGCTAGCAATACGAAAAAGTTTTGGTATTGCTAAGCAGTCGATGAGCGCGGGCAGTTCAGCAATTTCAGCATTTTCTCATGC
TAGACGTGCCCACAAAGATTAGGTATGTTTTTAGATGAGTTAAGTGAATGCTTTGAACTGGTGTATGTTATTGCTTCACACGTGTTTTCCCCTACTGAGAGTTACTTTTT
GGAGGATCTGCTGCATATGTTGCGACTTTGAAGTTGTTCTAGGTAGTGAAACCATAACATGTATTTGTAATGTAAATATTCTGTTAAATGTGTTGAGTCATACAATATAG
TCCTACTATTTTATGGGTTCCTTTATTGGTGATGAAAGTATCTAGATTGAAGATAGAATGTCATAATCTAAGTAATATTTTGGCTTTAAGTTACTGCTATGTACTGTAAT
TGTGAAAATTTACAAGGATTTAAATTTGAAGTGTTCAATGAGGTGATGACTGATTGAATGAATTTGGATTTATGAAGTTCAAGGTTAGAAACATGAATTTTATGTTTGTA
TTGTGTAAATCTTAAGTTCGTGTAATATGTATTTCATTTGGAAGAGGTTAACC

Protein sequence

Show/hide protein sequence

MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPSVEKACRNIGRDVLCWTRRGSPLRALLVISVGTIALLAL
TGLLIFLLFFLAATFNAIVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAIRKSFGIAKQSMSAGSSAISAFSHARRA
HKD

Carg18278 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome