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Carg18290 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18290
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein REVEILLE 1-like isoform X1
Genome locationCarg_Chr04:17855067..17857243
RNA-Seq ExpressionCarg18290
SyntenyCarg18290
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602012.1 Protein REVEILLE 1, partial [Cucurbita argyrosperma subsp. sororia]2.5e-1697.92Show/hide
Query:  MGAANMQSQNAGGGLCSDNTSSSLYESTATADQLKDPFSSGKEYCPKS
        MGAANMQSQNAGGGLCSDNTSSSLYESTATADQLKDPFSSGKEYCPK+
Subjt:  MGAANMQSQNAGGGLCSDNTSSSLYESTATADQLKDPFSSGKEYCPKS
KAG7032705.1 hypothetical protein SDJN02_06755 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-43100Show/hide
Query:  MGAANMQSQNAGGGLCSDNTSSSLYESTATADQLKDPFSSGKEYCPKSMWARRLQFRFVAMPRSSSPRSNALIPVPIIYHNVHIPVYECHA
        MGAANMQSQNAGGGLCSDNTSSSLYESTATADQLKDPFSSGKEYCPKSMWARRLQFRFVAMPRSSSPRSNALIPVPIIYHNVHIPVYECHA
Subjt:  MGAANMQSQNAGGGLCSDNTSSSLYESTATADQLKDPFSSGKEYCPKSMWARRLQFRFVAMPRSSSPRSNALIPVPIIYHNVHIPVYECHA
XP_022961509.1 protein REVEILLE 1-like isoform X1 [Cucurbita moschata]7.3e-1695.83Show/hide
Query:  MGAANMQSQNAGGGLCSDNTSSSLYESTATADQLKDPFSSGKEYCPKS
        MGAANMQSQN GGGLCSDNTSSSLYESTATADQLKDPFSSGKEYCPK+
Subjt:  MGAANMQSQNAGGGLCSDNTSSSLYESTATADQLKDPFSSGKEYCPKS
XP_022991133.1 protein REVEILLE 1-like isoform X1 [Cucurbita maxima]2.5e-1697.92Show/hide
Query:  MGAANMQSQNAGGGLCSDNTSSSLYESTATADQLKDPFSSGKEYCPKS
        MGAANMQSQNAGGGLCSDNTSSSLYESTATADQLKDPFSSGKEYCPK+
Subjt:  MGAANMQSQNAGGGLCSDNTSSSLYESTATADQLKDPFSSGKEYCPKS
XP_023520270.1 protein REVEILLE 1-like isoform X1 [Cucurbita pepo subsp. pepo]2.5e-1697.92Show/hide
Query:  MGAANMQSQNAGGGLCSDNTSSSLYESTATADQLKDPFSSGKEYCPKS
        MGAANMQSQNAGGGLCSDNTSSSLYESTATADQLKDPFSSGKEYCPK+
Subjt:  MGAANMQSQNAGGGLCSDNTSSSLYESTATADQLKDPFSSGKEYCPKS
TrEMBL top hitse value%identityAlignment
A0A0A0KPX5 HTH myb-type domain-containing protein6.2e-0559.57Show/hide
Query:  MGAANMQSQNAGGGLCSDNTSSSLYESTATADQLKDPFSSGKEYCPK
        MGA NM+ QN GGGLCSDN SS++YE T T DQ        KE+CPK
Subjt:  MGAANMQSQNAGGGLCSDNTSSSLYESTATADQLKDPFSSGKEYCPK
A0A1S3CIJ4 protein REVEILLE 1-like isoform X15.3e-0457.45Show/hide
Query:  MGAANMQSQNAGGGLCSDNTSSSLYESTATADQLKDPFSSGKEYCPK
        MGA NM+ QN GGGLCSD+ SS+ YE T + DQ   P    KE+CPK
Subjt:  MGAANMQSQNAGGGLCSDNTSSSLYESTATADQLKDPFSSGKEYCPK
A0A6J1HE94 protein REVEILLE 1-like isoform X13.5e-1695.83Show/hide
Query:  MGAANMQSQNAGGGLCSDNTSSSLYESTATADQLKDPFSSGKEYCPKS
        MGAANMQSQN GGGLCSDNTSSSLYESTATADQLKDPFSSGKEYCPK+
Subjt:  MGAANMQSQNAGGGLCSDNTSSSLYESTATADQLKDPFSSGKEYCPKS
A0A6J1JVA8 protein REVEILLE 1-like isoform X11.2e-1697.92Show/hide
Query:  MGAANMQSQNAGGGLCSDNTSSSLYESTATADQLKDPFSSGKEYCPKS
        MGAANMQSQNAGGGLCSDNTSSSLYESTATADQLKDPFSSGKEYCPK+
Subjt:  MGAANMQSQNAGGGLCSDNTSSSLYESTATADQLKDPFSSGKEYCPKS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGCCGCAAACATGCAATCACAAAATGCTGGTGGAGGTCTCTGTTCTGACAACACTAGTTCATCTCTTTATGAATCAACTGCGACTGCTGATCAATTGAAGGACCC
TTTTTCAAGCGGGAAAGAATATTGTCCCAAGAGCATGTGGGCACGAAGACTGCAGTTCAGATTCGTAGCCATGCCCAGAAGTTCTTCTCCAAGGTCTAATGCTCTTATTC
CAGTTCCCATTATCTACCATAATGTACATATTCCGGTTTATGAATGTCATGCGTAA
mRNA sequenceShow/hide mRNA sequence
CTGTTTATTGTTTTCGGTGTAATTAGTTTCTCAAGTTGTTGTGTTCATTTGTAGTGGGTTGTATGTTCTCTGTGTGACCAGGAGTTGTTTGATGTTCAGAATGAAGTTTG
TTGTTTGTAATTTTGTTCTCTTGGTCTTCTTCGTGATCGAGTGATTAGTTGTTCTTTCTTTAGCTCTTGTACGGACGAAATCGTGCTTTGTTTTCCTGAAAGTCTACTGG
CGCGAATCTGATTCTTTGTGGTTTTTGAGATTGAAGCCCTAGGAACTGTGATTCAGAGCCCGATCACTTAATTCTAGGGTTTTGAAGAATTTTATCTCGATAATGAGTTG
AATTAGGACTGTTAACGCGCGTTGAAGTTGAACTAAGTCAGTTTGTTATCAAGCTGTTGAATTCAAACAGTCGAAAATACGACTGTTTAGGGATTGGTTATTCGGATTGT
TGAAAATTCGTGAGGATTTATTGGTTACTGTAAATTCAACGGCAATCAACTAAGTGGAAACGAAAAGAAAAGGACACACAGGTGTTTGGCTCCGTGAAAGTAGAGGAAGA
TTTTGCACGGCGAGAACATCCATGGGTGCCGCAAACATGCAATCACAAAATGCTGGTGGAGGTCTCTGTTCTGACAACACTAGTTCATCTCTTTATGAATCAACTGCGAC
TGCTGATCAATTGAAGGACCCTTTTTCAAGCGGGAAAGAATATTGTCCCAAGAGCATGTGGGCACGAAGACTGCAGTTCAGATTCGTAGCCATGCCCAGAAGTTCTTCTC
CAAGGTCTAATGCTCTTATTCCAGTTCCCATTATCTACCATAATGTACATATTCCGGTTTATGAATGTCATGCGTAATTCAAACGGGTGTACCGCAACTCTCGGAGGATG
CATCGACATTCCTCCTCCACGTCCAAAACGAAAACCAGCGCATCCATATCCCCGTAAAGAAGTACCTGGTTCGCATAAGTTGTCCTCCATTTCAGAACAGACAAGGTCTT
TG
Protein sequenceShow/hide protein sequence
MGAANMQSQNAGGGLCSDNTSSSLYESTATADQLKDPFSSGKEYCPKSMWARRLQFRFVAMPRSSSPRSNALIPVPIIYHNVHIPVYECHA