CuGenDBv2

Gene ID	Carg18301
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	psbQ-like protein 3, chloroplastic
Genome location	Carg_Chr04:17744200..17745203
RNA-Seq Expression	Carg18301
Synteny	Carg18301
Gene Ontology terms	GO:0009767 - photosynthetic electron transport chain (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0009654 - photosystem II oxygen evolving complex (cellular component) GO:0019898 - extrinsic component of membrane (cellular component) GO:0005509 - calcium ion binding (molecular function) GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
InterPro domains	IPR008797 - Oxygen-evolving enhancer protein 3 IPR023222 - PsbQ-like domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6601995.1 Auxin response factor 8, partial [Cucurbita argyrosperma subsp. sororia]

3.3e-92

98.92

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Query:  MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSSVASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQV
        MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIAL+ASSSVASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQV
Subjt:  MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSSVASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQV

Query:  RGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEMAISDILSRI
        RGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPP ERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEMAISDILSRI
Subjt:  RGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEMAISDILSRI

KAG7032694.1 PsbQ-like protein 3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

5.2e-93

100

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Query:  MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSSVASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQV
        MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSSVASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQV
Subjt:  MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSSVASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQV

Query:  RGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEMAISDILSRI
        RGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEMAISDILSRI
Subjt:  RGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEMAISDILSRI

XP_022962345.1 psbQ-like protein 3, chloroplastic isoform X1 [Cucurbita moschata]

3.3e-92

99.46

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Query:  MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSSVASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQV
        MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSSVASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQV
Subjt:  MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSSVASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQV

Query:  RGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEMAISDILSRI
        RGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNI MAISDILSRI
Subjt:  RGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEMAISDILSRI

XP_022991100.1 psbQ-like protein 3, chloroplastic isoform X1 [Cucurbita maxima]

1.0e-85

94.62

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Query:  MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSSVASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQV
        MAELSPISVSNLSNRIHF SSSPPI S QLFSITAKRCSNCRSISRRLGLG +ALMASSSVASTPV+I NALDLKLIAPEQSFEEAESGIRGHAEAVLQV
Subjt:  MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSSVASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQV

Query:  RGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEMAISDILSRI
        RGLIESESWKEAQKQLR+SSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERV QCYDNI MAISDILSRI
Subjt:  RGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEMAISDILSRI

XP_023551782.1 psbQ-like protein 3, chloroplastic [Cucurbita pepo subsp. pepo]

1.2e-86

94.21

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Query:  MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNC----RSISRRLGLGLIALMASSSVASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEA
        MAELSPISVSNLSNRIHFSSSSPPI S QLFSITAKRCSNC    RSISRRLGLGLIALMASSSVASTPV+IANALDLKLIAPEQSFEEAESGIRGHAEA
Subjt:  MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNC----RSISRRLGLGLIALMASSSVASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEA

Query:  VLQVRGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEMAISDILSRI
        VLQVRGLIESESWKEAQKQLR+SSPLLKQDLYTIIEYKPPAERPPLR+LYSLLFNNVTRMDYAARDKDAERV QCYDNI MAISDILSRI
Subjt:  VLQVRGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEMAISDILSRI

TrEMBL top hits

e value

%identity

Alignment

A0A5A7VLN5 PsbQ-like protein 3

2.7e-63

74.73

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Query:  MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSSVASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQV
        MA+L PIS+SNL+NRIHF SSSP   S Q F+ T     N ++ISRRLGLG IALMA SSV + P  +ANAL+LKLIAPEQS +EAE GIRGHAEA+LQV
Subjt:  MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSSVASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQV

Query:  RGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEMAISDILSRI
        R L+ESE+WKEAQK+LR++S LLKQDLYTIIEYKPPAERP LRKLYSLLFNNVTRMDYAARDKDA  VR+CY  +EMAISDILSRI
Subjt:  RGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEMAISDILSRI

A0A6J1HES6 psbQ-like protein 3, chloroplastic isoform X1

1.6e-92

99.46

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Query:  MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSSVASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQV
        MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSSVASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQV
Subjt:  MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSSVASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQV

Query:  RGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEMAISDILSRI
        RGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNI MAISDILSRI
Subjt:  RGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEMAISDILSRI

A0A6J1HGU7 uncharacterized protein LOC111462819 isoform X2

1.1e-75

95.71

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Query:  MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSSVASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQV
        MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSSVASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQV
Subjt:  MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSSVASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQV

Query:  RGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDK
        RGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTR +   R++
Subjt:  RGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDK

A0A6J1JPT1 uncharacterized protein LOC111487796 isoform X2

3.9e-70

90.8

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Query:  MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSSVASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQV
        MAELSPISVSNLSNRIHF SSSPPI S QLFSITAKRCSNCRSISRRLGLG +ALMASSSVASTPV+I NALDLKLIAPEQSFEEAESGIRGHAEAVLQV
Subjt:  MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSSVASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQV

Query:  RGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDK
        RGLIESESWKEAQKQLR+SSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTR +   R++
Subjt:  RGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDK

A0A6J1JRX6 psbQ-like protein 3, chloroplastic isoform X1

5.0e-86

94.62

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Query:  MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSSVASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQV
        MAELSPISVSNLSNRIHF SSSPPI S QLFSITAKRCSNCRSISRRLGLG +ALMASSSVASTPV+I NALDLKLIAPEQSFEEAESGIRGHAEAVLQV
Subjt:  MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSSVASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQV

Query:  RGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEMAISDILSRI
        RGLIESESWKEAQKQLR+SSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERV QCYDNI MAISDILSRI
Subjt:  RGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEMAISDILSRI

SwissProt top hits

e value

%identity

Alignment

Q2V4B2 PsbQ-like protein 3, chloroplastic

5.5e-21

47.71

Show/hide

Query:  PEQSFEEAESGIRGHAEAVLQVRG-LIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEM
        PE++ E A+ G+R +AE + +++  +IE + WKE  K+LR S+  +KQD Y II+ KPP +RP  R LYS LFN++T+MDYAARD D  +V + Y NI  
Subjt:  PEQSFEEAESGIRGHAEAVLQVRG-LIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEM

Query:  AISDILSRI
         + DI  RI
Subjt:  AISDILSRI

Arabidopsis top hits

e value

%identity

Alignment

AT2G01918.1 PsbQ-like 3

3.9e-22

47.71

Show/hide

Query:  PEQSFEEAESGIRGHAEAVLQVRG-LIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEM
        PE++ E A+ G+R +AE + +++  +IE + WKE  K+LR S+  +KQD Y II+ KPP +RP  R LYS LFN++T+MDYAARD D  +V + Y NI  
Subjt:  PEQSFEEAESGIRGHAEAVLQVRG-LIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEM

Query:  AISDILSRI
         + DI  RI
Subjt:  AISDILSRI

AT3G01440.1 PsbQ-like 1

1.3e-04

23.71

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Query:  IRGHAEAVLQVRGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEMAISDILSRI
        ++ +A  +L +  LI  ++    +K LR  S  L  D   +I      ++ PL  L + LF+N  +++ AA+ K+      CY + +  + ++++R+
Subjt:  IRGHAEAVLQVRGLIESESWKEAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEMAISDILSRI

Sequences

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CDS sequence

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ATGGCGGAATTAAGCCCAATCTCAGTCTCGAACCTCAGTAATCGTATCCATTTCTCTTCTTCTTCTCCTCCTATAAACTCCTCCCAATTGTTCAGCATCACCGCCAAGCG
TTGTAGCAATTGCAGAAGCATAAGCAGAAGATTAGGTCTGGGATTGATAGCTTTAATGGCGTCGTCGTCTGTAGCCTCGACGCCTGTGAGAATAGCGAATGCTTTGGATC
TGAAATTGATAGCGCCGGAGCAGAGCTTCGAGGAGGCGGAGAGCGGAATCAGAGGCCATGCGGAAGCGGTTTTGCAGGTGAGAGGTTTAATTGAATCGGAGTCTTGGAAG
GAAGCGCAGAAGCAGTTGAGAACCAGTTCGCCGCTGCTGAAACAGGATCTGTACACTATAATTGAATATAAACCGCCTGCCGAGCGACCTCCTCTCAGGAAACTCTATTC
TCTTCTCTTCAACAATGTTACTCGAATGGATTATGCAGCGAGAGATAAAGATGCGGAACGAGTTCGGCAGTGCTACGATAACATTGAGATGGCCATTTCTGACATTTTAT
CCAGAATTTAG

mRNA sequence

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AGCTTCTCGTTTCTATAAATAGACAGAGATCAGGATGAAGCCTCACTCTGTACTTCAATGGCGGAATTAAGCCCAATCTCAGTCTCGAACCTCAGTAATCGTATCCATTT
CTCTTCTTCTTCTCCTCCTATAAACTCCTCCCAATTGTTCAGCATCACCGCCAAGCGTTGTAGCAATTGCAGAAGCATAAGCAGAAGATTAGGTCTGGGATTGATAGCTT
TAATGGCGTCGTCGTCTGTAGCCTCGACGCCTGTGAGAATAGCGAATGCTTTGGATCTGAAATTGATAGCGCCGGAGCAGAGCTTCGAGGAGGCGGAGAGCGGAATCAGA
GGCCATGCGGAAGCGGTTTTGCAGGTGAGAGGTTTAATTGAATCGGAGTCTTGGAAGGAAGCGCAGAAGCAGTTGAGAACCAGTTCGCCGCTGCTGAAACAGGATCTGTA
CACTATAATTGAATATAAACCGCCTGCCGAGCGACCTCCTCTCAGGAAACTCTATTCTCTTCTCTTCAACAATGTTACTCGAATGGATTATGCAGCGAGAGATAAAGATG
CGGAACGAGTTCGGCAGTGCTACGATAACATTGAGATGGCCATTTCTGACATTTTATCCAGAATTTAGAAAGATAAACGAAGGTTCTCGATTCTCCAGCCAATGATCGTA
ATACTCTTTCCAATCTTTTGTTTTTCGATCTTATAACTTGGCATATAAACACAAAGTATTGGAAATAACATGTAGAATATAATGATGAACGTGCATTGCATACAATTTAG
TGCCGAAGTTTGGATCTCAAATAGTGTTATCATCAAATAGATATCACAATCGTCACATTCAAACGTGCATATTCCTGGAGATTGTTCTTTGCAGAAAAAAGAA

Protein sequence

Show/hide protein sequence

MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSSVASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQVRGLIESESWK
EAQKQLRTSSPLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEMAISDILSRI

Carg18301 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome