; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg18326 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18326
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontelomere repeat-binding protein 4-like isoform X2
Genome locationCarg_Chr04:1044469..1045314
RNA-Seq ExpressionCarg18326
SyntenyCarg18326
Gene Ontology termsGO:0042162 - telomeric DNA binding (molecular function)
InterPro domainsIPR009057 - Homeobox-like domain superfamily
IPR031105 - Telomere repeat-binding protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600044.1 Telomere repeat-binding protein 4, partial [Cucurbita argyrosperma subsp. sororia]2.2e-41100Show/hide
Query:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSC
        RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSC
Subjt:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSC

KAG7030714.1 Telomere repeat-binding protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-62100Show/hide
Query:  MIDAIVKHKLKPIEIRWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSCC
        MIDAIVKHKLKPIEIRWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSCC
Subjt:  MIDAIVKHKLKPIEIRWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSCC

Query:  VRNRAFSVEFEHSLVARSY
        VRNRAFSVEFEHSLVARSY
Subjt:  VRNRAFSVEFEHSLVARSY

XP_022942552.1 telomere repeat-binding protein 4-like isoform X1 [Cucurbita moschata]2.2e-41100Show/hide
Query:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSC
        RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSC
Subjt:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSC

XP_022995213.1 telomere repeat-binding protein 4-like isoform X2 [Cucurbita maxima]2.2e-41100Show/hide
Query:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSC
        RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSC
Subjt:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSC

XP_023539911.1 telomere repeat-binding protein 4-like isoform X1 [Cucurbita pepo subsp. pepo]2.2e-41100Show/hide
Query:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSC
        RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSC
Subjt:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSC

TrEMBL top hitse value%identityAlignment
A0A6J1CDJ8 telomere repeat-binding protein 3 isoform X23.0e-3998.81Show/hide
Query:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHS-KHHQAGVVKAIEGSS
        RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHS KHHQAGVVKAIEGSS
Subjt:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHS-KHHQAGVVKAIEGSS

A0A6J1FV47 telomere repeat-binding protein 4-like isoform X11.1e-41100Show/hide
Query:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSC
        RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSC
Subjt:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSC

A0A6J1FWI5 telomere repeat-binding protein 4-like isoform X21.1e-41100Show/hide
Query:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSC
        RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSC
Subjt:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSC

A0A6J1K525 telomere repeat-binding protein 4-like isoform X11.1e-41100Show/hide
Query:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSC
        RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSC
Subjt:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSC

A0A6J1K791 telomere repeat-binding protein 4-like isoform X21.1e-41100Show/hide
Query:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSC
        RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSC
Subjt:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSC

SwissProt top hitse value%identityAlignment
Q6R0E3 Telomere repeat-binding protein 54.6e-2990.77Show/hide
Query:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAK
        RWRDVK RAF+NA HRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVL AHAYWSQ Q K
Subjt:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAK

Q9C7B1 Telomere repeat-binding protein 37.8e-2984.06Show/hide
Query:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSK
        RWRDVK RAFE+ADHRTYVDLKDKWKTLVHTA ISPQQRRGEPVPQELLDRVL A+ YWSQHQ K  ++
Subjt:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSK

Q9FFY9 Telomere repeat-binding protein 42.9e-3177.11Show/hide
Query:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSS
        RWRDVK R+FENA HRTYVDLKDKWKTLVHTA ISPQQRRGEPVPQELLDRVL AH YW+QHQ KQ+ KH  A  +    GSS
Subjt:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSS

Q9LL45 Telomere-binding protein 13.9e-2886.57Show/hide
Query:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQH
        RWRDVKFRAFEN  HRTYVDLKDKWKTLVHTA I+PQQRRG PVPQELLDRVLAA AYWS+ QAK H
Subjt:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQH

Q9SNB9 Telomere repeat-binding protein 21.6e-2969.89Show/hide
Query:  IDAIVKHKLKPIEIRWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAI
        ++A+V+   K    RWRDVK RAFE+ADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVL AHAYWSQH   Q      +  V+A+
Subjt:  IDAIVKHKLKPIEIRWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAI

Arabidopsis top hitse value%identityAlignment
AT1G07540.1 TRF-like 23.2e-3090.77Show/hide
Query:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAK
        RWRDVK RAF+NA HRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVL AHAYWSQ Q K
Subjt:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAK

AT3G46590.1 TRF-like 11.1e-3069.89Show/hide
Query:  IDAIVKHKLKPIEIRWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAI
        ++A+V+   K    RWRDVK RAFE+ADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVL AHAYWSQH   Q      +  V+A+
Subjt:  IDAIVKHKLKPIEIRWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAI

AT3G46590.2 TRF-like 11.1e-3069.89Show/hide
Query:  IDAIVKHKLKPIEIRWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAI
        ++A+V+   K    RWRDVK RAFE+ADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVL AHAYWSQH   Q      +  V+A+
Subjt:  IDAIVKHKLKPIEIRWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAI

AT3G46590.3 TRF-like 11.1e-3069.89Show/hide
Query:  IDAIVKHKLKPIEIRWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAI
        ++A+V+   K    RWRDVK RAFE+ADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVL AHAYWSQH   Q      +  V+A+
Subjt:  IDAIVKHKLKPIEIRWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAI

AT5G13820.1 telomeric DNA binding protein 12.0e-3277.11Show/hide
Query:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSS
        RWRDVK R+FENA HRTYVDLKDKWKTLVHTA ISPQQRRGEPVPQELLDRVL AH YW+QHQ KQ+ KH  A  +    GSS
Subjt:  RWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGATGCCATTGTGAAGCACAAGTTAAAACCAATTGAAATCCGGTGGCGGGATGTTAAGTTTCGTGCATTTGAGAATGCAGATCATCGAACTTACGTGGATTTGAA
GGATAAATGGAAAACCCTGGTTCACACGGCGAGAATATCCCCTCAGCAGAGAAGAGGCGAGCCTGTCCCACAAGAACTTCTGGACCGGGTGCTGGCTGCACATGCTTACT
GGTCGCAGCATCAGGCAAAGCAACACAGCAAGCATCATCAAGCTGGAGTTGTGAAGGCCATTGAGGGCTCCAGCTGCTGTGTTAGAAATAGGGCATTTAGTGTTGAATTT
GAGCACTCTTTGGTGGCCAGATCATATTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGATGCCATTGTGAAGCACAAGTTAAAACCAATTGAAATCCGGTGGCGGGATGTTAAGTTTCGTGCATTTGAGAATGCAGATCATCGAACTTACGTGGATTTGAA
GGATAAATGGAAAACCCTGGTTCACACGGCGAGAATATCCCCTCAGCAGAGAAGAGGCGAGCCTGTCCCACAAGAACTTCTGGACCGGGTGCTGGCTGCACATGCTTACT
GGTCGCAGCATCAGGCAAAGCAACACAGCAAGCATCATCAAGCTGGAGTTGTGAAGGCCATTGAGGGCTCCAGCTGCTGTGTTAGAAATAGGGCATTTAGTGTTGAATTT
GAGCACTCTTTGGTGGCCAGATCATATTAA
Protein sequenceShow/hide protein sequence
MIDAIVKHKLKPIEIRWRDVKFRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQAKQHSKHHQAGVVKAIEGSSCCVRNRAFSVEF
EHSLVARSY