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Carg18328 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18328
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCyclin-dependent protein kinase inhibitor SMR4
Genome locationCarg_Chr04:1037220..1037435
RNA-Seq ExpressionCarg18328
SyntenyCarg18328
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0016491 - oxidoreductase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE7996760.1 hypothetical protein FH972_001453 [Carpinus fangiana]1.6e-1053.33Show/hide
Query:  KDICRTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPRGDV
        ++ C TPR   CR+P A  CP AP+KK V  K++APPK+GYF+PPDLE LF  V+  G +
Subjt:  KDICRTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPRGDV
KAE8647993.1 hypothetical protein Csa_021483 [Cucumis sativus]6.5e-2079.03Show/hide
Query:  MAEEKKDICRTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPR
        MAEE  ++CRTPRR+SCRIPVA+ CP+APRKK V LKRKAPPK+GYFR PDLEVLFGFV PR
Subjt:  MAEEKKDICRTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPR
KAG6600042.1 Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. sororia]8.7e-33100Show/hide
Query:  MAEEKKDICRTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPRGDVYVHNNL
        MAEEKKDICRTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPRGDVYVHNNL
Subjt:  MAEEKKDICRTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPRGDVYVHNNL
XP_010256881.1 PREDICTED: uncharacterized protein LOC104597159 [Nelumbo nucifera]6.1e-1054.55Show/hide
Query:  MAEEKKDICRTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPRGDVY
        M EE++  C+TP+   C+IP A +CP  PRKK V  K++ PPK+GYF+PPDLEVLF  +APR + Y
Subjt:  MAEEKKDICRTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPRGDVY
XP_021655298.1 cyclin-dependent protein kinase inhibitor SMR4-like [Hevea brasiliensis]1.9e-1160Show/hide
Query:  EEKKDICRTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPR
        E   ++C TPRR+  RIP A+ CP APRKK V  K+++PPKDGYF+PPDLE LF  +APR
Subjt:  EEKKDICRTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPR
TrEMBL top hitse value%identityAlignment
A0A0A0KS84 Uncharacterized protein3.1e-2079.03Show/hide
Query:  MAEEKKDICRTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPR
        MAEE  ++CRTPRR+SCRIPVA+ CP+APRKK V LKRKAPPK+GYFR PDLEVLFGFV PR
Subjt:  MAEEKKDICRTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPR
A0A1U8A503 uncharacterized protein LOC1045971592.9e-1054.55Show/hide
Query:  MAEEKKDICRTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPRGDVY
        M EE++  C+TP+   C+IP A +CP  PRKK V  K++ PPK+GYF+PPDLEVLF  +APR + Y
Subjt:  MAEEKKDICRTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPRGDVY
A0A5N6QF01 Uncharacterized protein7.7e-1153.33Show/hide
Query:  KDICRTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPRGDV
        ++ C TPR   CR+P A  CP AP+KK V  K++APPK+GYF+PPDLE LF  V+  G +
Subjt:  KDICRTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPRGDV
B9T003 Uncharacterized protein5.0e-1063.64Show/hide
Query:  CRTPRRKSCRIPVA-VLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPR
        CRTP R+ CRIP A V CP APRKK V +K++ PPKDGYF+PPDLE  F  + PR
Subjt:  CRTPRRKSCRIPVA-VLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPR
G7KBS4 Uncharacterized protein5.0e-1056.9Show/hide
Query:  MAEEKKDICRTPRRKSCRIPVAVLCPAAPRKKAV--SLKRKAPPKDGYFRPPDLEVLF
        M  + ++ CRTP+   CRIP A +CP+AP+KK V  S K+K PPKDGYF PPDLE++F
Subjt:  MAEEKKDICRTPRRKSCRIPVAVLCPAAPRKKAV--SLKRKAPPKDGYFRPPDLEVLF
SwissProt top hitse value%identityAlignment
Q1G3Y4 Cyclin-dependent protein kinase inhibitor SMR158.0e-0544.44Show/hide
Query:  EKKDIC-RTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLF
        E +D+C  TP   S RIP  + CP AP+K+ ++LK    P++ +F PPDLE +F
Subjt:  EKKDIC-RTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLF
Q1JPP8 Cyclin-dependent protein kinase inhibitor SMR43.7e-1053.23Show/hide
Query:  MAEEKKDICRTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPR
        MAEE    C TPR    RIPVA +CP  PRKK + ++++ PP++GYF+PPDLE LF +  PR
Subjt:  MAEEKKDICRTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPR
Q9LNX4 Cyclin-dependent protein kinase inhibitor SMR55.0e-0749.09Show/hide
Query:  CRTPRRKSCRIPVAVLCPAAPRKKAVSL---KRKAPPKDGYFRPPDLEVLFGFVA
        C TP R  CRIP    CP   R+K   L   K++ PPK GYF+PPDL++ F  VA
Subjt:  CRTPRRKSCRIPVAVLCPAAPRKKAVSL---KRKAPPKDGYFRPPDLEVLFGFVA
Arabidopsis top hitse value%identityAlignment
AT1G10690.1 unknown protein5.3e-0447.27Show/hide
Query:  EKKDIC-RTPRRKSCRIPVAVLCPAAPRKKAVSLK-RKAPPKDGYFRPPDLEVLF
        E++D C  TP   S RIP    CPAAP+K+  SLK         YF PPDLE +F
Subjt:  EKKDIC-RTPRRKSCRIPVAVLCPAAPRKKAVSLK-RKAPPKDGYFRPPDLEVLF
AT1G60783.1 unknown protein5.7e-0644.44Show/hide
Query:  EKKDIC-RTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLF
        E +D+C  TP   S RIP  + CP AP+K+ ++LK    P++ +F PPDLE +F
Subjt:  EKKDIC-RTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLF
AT5G02220.1 unknown protein2.6e-1153.23Show/hide
Query:  MAEEKKDICRTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPR
        MAEE    C TPR    RIPVA +CP  PRKK + ++++ PP++GYF+PPDLE LF +  PR
Subjt:  MAEEKKDICRTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAGGAAAAGAAGGATATATGCCGCACGCCGCGACGGAAGAGCTGCCGGATTCCGGTGGCGGTGTTGTGCCCGGCGGCGCCGAGGAAGAAGGCGGTTAGCTTGAA
GCGCAAGGCTCCGCCGAAGGACGGGTACTTTCGGCCGCCGGATTTGGAGGTGTTGTTCGGCTTTGTTGCTCCAAGAGGAGATGTATATGTCCATAATAATCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAGGAAAAGAAGGATATATGCCGCACGCCGCGACGGAAGAGCTGCCGGATTCCGGTGGCGGTGTTGTGCCCGGCGGCGCCGAGGAAGAAGGCGGTTAGCTTGAA
GCGCAAGGCTCCGCCGAAGGACGGGTACTTTCGGCCGCCGGATTTGGAGGTGTTGTTCGGCTTTGTTGCTCCAAGAGGAGATGTATATGTCCATAATAATCTTTGA
Protein sequenceShow/hide protein sequence
MAEEKKDICRTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPRGDVYVHNNL