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Carg18337 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18337
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionzinc finger protein 10-like
Genome locationCarg_Chr04:992179..992559
RNA-Seq ExpressionCarg18337
SyntenyCarg18337
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600035.1 Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. sororia]1.5e-67100Show/hide
Query:  MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQANPFCPKNS
        MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQANPFCPKNS
Subjt:  MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQANPFCPKNS

Query:  RSDSGSCLKRAKVCVSEEQLDLELKL
        RSDSGSCLKRAKVCVSEEQLDLELKL
Subjt:  RSDSGSCLKRAKVCVSEEQLDLELKL

XP_004151402.2 zinc finger protein 11 [Cucumis sativus]2.9e-3161.87Show/hide
Query:  MAETHHLWRQILNYSNTFKPSPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKP-TPTLDLQANPFCPK
        MA+TH LWRQIL      K +  W +EKAFA+D  AAVWPPRSYSC FCMRQFRSAQALGGHMNVHRRDRA+LQN+PNR F IKP TPT DL  + F PK
Subjt:  MAETHHLWRQILNYSNTFKPSPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKP-TPTLDLQANPFCPK

Query:  NSRSDSGSCLKRAKVCV-----------SEEQLDLELKL
        N+ S   S LK+ K+             SE  LDLELKL
Subjt:  NSRSDSGSCLKRAKVCV-----------SEEQLDLELKL

XP_008461701.1 PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo]5.9e-3263.7Show/hide
Query:  MAETHHLWRQILNYSNTFKPSPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPN-RSFLIKPTPTLDLQANPFCPK
        MAETH +WRQIL      K +  W +EKAFA+D  AAVWPPRSYSC FCMRQFRSAQALGGHMNVHRRDRA+LQN+PN R F IKPTPT DL  + F PK
Subjt:  MAETHHLWRQILNYSNTFKPSPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPN-RSFLIKPTPTLDLQANPFCPK

Query:  NSRSDSGSCLKRAKVCV-------SEEQLDLELKL
        N+ S   S LK+ K+         SE  LDLELKL
Subjt:  NSRSDSGSCLKRAKVCV-------SEEQLDLELKL

XP_022988302.1 zinc finger protein 10-like [Cucurbita maxima]1.6e-6698.41Show/hide
Query:  MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQANPFCPKNS
        MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQ +PFCPKNS
Subjt:  MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQANPFCPKNS

Query:  RSDSGSCLKRAKVCVSEEQLDLELKL
        RSDSGSCLKRAKVCVSEEQLDLELKL
Subjt:  RSDSGSCLKRAKVCVSEEQLDLELKL

XP_023542190.1 zinc finger protein 10-like [Cucurbita pepo subsp. pepo]3.6e-6697.62Show/hide
Query:  MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQANPFCPKNS
        MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQ +PFCPKN+
Subjt:  MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQANPFCPKNS

Query:  RSDSGSCLKRAKVCVSEEQLDLELKL
        RSDSGSCLKRAKVCVSEEQLDLELKL
Subjt:  RSDSGSCLKRAKVCVSEEQLDLELKL

TrEMBL top hitse value%identityAlignment
A0A0A0KLQ3 C2H2-type domain-containing protein1.4e-3161.87Show/hide
Query:  MAETHHLWRQILNYSNTFKPSPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKP-TPTLDLQANPFCPK
        MA+TH LWRQIL      K +  W +EKAFA+D  AAVWPPRSYSC FCMRQFRSAQALGGHMNVHRRDRA+LQN+PNR F IKP TPT DL  + F PK
Subjt:  MAETHHLWRQILNYSNTFKPSPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKP-TPTLDLQANPFCPK

Query:  NSRSDSGSCLKRAKVCV-----------SEEQLDLELKL
        N+ S   S LK+ K+             SE  LDLELKL
Subjt:  NSRSDSGSCLKRAKVCV-----------SEEQLDLELKL

A0A1S3CGM6 transcriptional regulator SUPERMAN-like2.8e-3263.7Show/hide
Query:  MAETHHLWRQILNYSNTFKPSPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPN-RSFLIKPTPTLDLQANPFCPK
        MAETH +WRQIL      K +  W +EKAFA+D  AAVWPPRSYSC FCMRQFRSAQALGGHMNVHRRDRA+LQN+PN R F IKPTPT DL  + F PK
Subjt:  MAETHHLWRQILNYSNTFKPSPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPN-RSFLIKPTPTLDLQANPFCPK

Query:  NSRSDSGSCLKRAKVCV-------SEEQLDLELKL
        N+ S   S LK+ K+         SE  LDLELKL
Subjt:  NSRSDSGSCLKRAKVCV-------SEEQLDLELKL

A0A5A7UA35 Transcriptional regulator SUPERMAN-like2.8e-3263.7Show/hide
Query:  MAETHHLWRQILNYSNTFKPSPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPN-RSFLIKPTPTLDLQANPFCPK
        MAETH +WRQIL      K +  W +EKAFA+D  AAVWPPRSYSC FCMRQFRSAQALGGHMNVHRRDRA+LQN+PN R F IKPTPT DL  + F PK
Subjt:  MAETHHLWRQILNYSNTFKPSPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPN-RSFLIKPTPTLDLQANPFCPK

Query:  NSRSDSGSCLKRAKVCV-------SEEQLDLELKL
        N+ S   S LK+ K+         SE  LDLELKL
Subjt:  NSRSDSGSCLKRAKVCV-------SEEQLDLELKL

A0A6J1CVW0 transcriptional regulator SUPERMAN-like1.1e-2063.53Show/hide
Query:  NTFKPSPSWEEKAFAEDTAAA------VWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQANP
        ++F+ + SWEE+AFAED AAA      VWPPRSYSC+FC R+FRSAQALGGHMNVHRRDRARL+ +PN       TPTL  Q +P
Subjt:  NTFKPSPSWEEKAFAEDTAAA------VWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQANP

A0A6J1JCP1 zinc finger protein 10-like7.9e-6798.41Show/hide
Query:  MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQANPFCPKNS
        MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQ +PFCPKNS
Subjt:  MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQANPFCPKNS

Query:  RSDSGSCLKRAKVCVSEEQLDLELKL
        RSDSGSCLKRAKVCVSEEQLDLELKL
Subjt:  RSDSGSCLKRAKVCVSEEQLDLELKL

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 101.1e-1755.42Show/hide
Query:  SWEEKAFAEDTAA-AVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQANPFCPKNSRSDS
        SWEE AFAED AA ++WPPRSY+C+FC R+F+SAQALGGHMNVHRRDRARL+   ++    K +      ++P  P +  SD+
Subjt:  SWEEKAFAEDTAA-AVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQANPFCPKNSRSDS

Q38895 Transcriptional regulator SUPERMAN2.8e-1369.39Show/hide
Query:  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTP
        WPPRSY+C+FC R+FRSAQALGGHMNVHRRDRARL+   + S    P+P
Subjt:  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTP

Q9LHS9 Probable transcriptional regulator RABBIT EARS4.4e-1448.54Show/hide
Query:  PSWEEKAFAE-----DTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQANPFCPKNSR-SDSGSCLKRAKVCV
        P  EE+AFA           +WPPRSYSC+FC R+F+SAQALGGHMNVHRRDRARL+        + P+ T D    P C +  +  D GS     KV V
Subjt:  PSWEEKAFAE-----DTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQANPFCPKNSR-SDSGSCLKRAKVCV

Query:  SEE
         EE
Subjt:  SEE

Q9SLB8 Zinc finger protein 111.1e-1257.97Show/hide
Query:  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQANPFCPKNSRSDSGS
        WPP++Y+C+FC R+FRSAQALGGHMNVHRRDRA+L+  P  S+L +P     + ANP  P  S S S S
Subjt:  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQANPFCPKNSRSDSGS

Q9SR34 Transcriptional regulator TAC11.0e-0772.73Show/hide
Query:  RSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQ
        RSY C+FC+R F +AQALGGHMN+HRRDRA+L+
Subjt:  RSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQ

Arabidopsis top hitse value%identityAlignment
AT2G37740.1 zinc-finger protein 107.9e-1955.42Show/hide
Query:  SWEEKAFAEDTAA-AVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQANPFCPKNSRSDS
        SWEE AFAED AA ++WPPRSY+C+FC R+F+SAQALGGHMNVHRRDRARL+   ++    K +      ++P  P +  SD+
Subjt:  SWEEKAFAEDTAA-AVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQANPFCPKNSRSDS

AT2G42410.1 zinc finger protein 117.7e-1457.97Show/hide
Query:  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQANPFCPKNSRSDSGS
        WPP++Y+C+FC R+FRSAQALGGHMNVHRRDRA+L+  P  S+L +P     + ANP  P  S S S S
Subjt:  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQANPFCPKNSRSDSGS

AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein2.0e-1469.39Show/hide
Query:  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTP
        WPPRSY+C+FC R+FRSAQALGGHMNVHRRDRARL+   + S    P+P
Subjt:  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTP

AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein5.7e-1773.08Show/hide
Query:  SWEEKAFAEDT----AAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRA
        SWE KAF +DT    +   WPPRSY+CNFC R+FRSAQALGGHMNVHRRDRA
Subjt:  SWEEKAFAEDT----AAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRA

AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein3.1e-1548.54Show/hide
Query:  PSWEEKAFAE-----DTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQANPFCPKNSR-SDSGSCLKRAKVCV
        P  EE+AFA           +WPPRSYSC+FC R+F+SAQALGGHMNVHRRDRARL+        + P+ T D    P C +  +  D GS     KV V
Subjt:  PSWEEKAFAE-----DTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQANPFCPKNSR-SDSGSCLKRAKVCV

Query:  SEE
         EE
Subjt:  SEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAAACTCATCATCTATGGAGACAAATCCTCAACTACTCCAACACCTTCAAACCGTCGCCATCCTGGGAGGAGAAGGCCTTCGCCGAGGACACCGCCGCCGCCGT
CTGGCCGCCGAGGTCCTACTCCTGCAACTTCTGTATGAGACAATTCCGGTCAGCTCAGGCCCTCGGTGGCCACATGAACGTGCATCGAAGAGACCGTGCTCGTCTCCAAA
ACAATCCCAACCGTTCATTCCTCATCAAACCAACTCCCACCCTCGATCTTCAAGCTAACCCTTTTTGTCCCAAAAACAGCAGATCAGATTCTGGGTCGTGTCTCAAACGA
GCCAAAGTTTGTGTCTCTGAAGAGCAGCTTGACCTTGAGCTCAAGCTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAAACTCATCATCTATGGAGACAAATCCTCAACTACTCCAACACCTTCAAACCGTCGCCATCCTGGGAGGAGAAGGCCTTCGCCGAGGACACCGCCGCCGCCGT
CTGGCCGCCGAGGTCCTACTCCTGCAACTTCTGTATGAGACAATTCCGGTCAGCTCAGGCCCTCGGTGGCCACATGAACGTGCATCGAAGAGACCGTGCTCGTCTCCAAA
ACAATCCCAACCGTTCATTCCTCATCAAACCAACTCCCACCCTCGATCTTCAAGCTAACCCTTTTTGTCCCAAAAACAGCAGATCAGATTCTGGGTCGTGTCTCAAACGA
GCCAAAGTTTGTGTCTCTGAAGAGCAGCTTGACCTTGAGCTCAAGCTATAG
Protein sequenceShow/hide protein sequence
MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQANPFCPKNSRSDSGSCLKR
AKVCVSEEQLDLELKL