; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg18347 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18347
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCarg_Chr04:928417..930864
RNA-Seq ExpressionCarg18347
SyntenyCarg18347
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044646 - Pentatricopeptide repeat-containing protein EMB1417-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600024.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.2e-151100Show/hide
Query:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
Subjt:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
Subjt:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ

Query:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
        DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
Subjt:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK

XP_022139301.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Momordica charantia]1.7e-13288.19Show/hide
Query:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        M  YRG+S GFD LVPKK CI N+NKL FRAAS KC H QA Q  TSS T ERRIV KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG 
Subjt:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAA+KALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILH HTRSISK+LFSRMISLYDHHDLQ
Subjt:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ

Query:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
        DK+IEIFADMEELGV+PDEDTVRRVA AF+KLGQ EN KMV+KRYGCKWKYIHFKGERVRV+RDGWDEDD+
Subjt:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK

XP_022942519.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita moschata]1.3e-15099.26Show/hide
Query:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLT STTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
Subjt:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
Subjt:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ

Query:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
        DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQ ENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
Subjt:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK

XP_022996325.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita maxima]2.5e-14998.52Show/hide
Query:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
Subjt:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMI+LYDHHDLQ
Subjt:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ

Query:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
        DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQ ENGK VYKRYGCKWKYIHFK ERVRVRRDGWDEDDK
Subjt:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK

XP_023541595.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita pepo subsp. pepo]1.0e-15099.26Show/hide
Query:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
Subjt:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
Subjt:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ

Query:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
        DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQ ENGK+VYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
Subjt:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK

TrEMBL top hitse value%identityAlignment
A0A1S3CP50 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X15.2e-13288.19Show/hide
Query:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        ML   GSSTGFDALVPK  CIY +NK AFR ASV CVH QAAQ  TS TT ERR+V KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
Subjt:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAA+KALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTRSISKR+FSRMISLY+HHDLQ
Subjt:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ

Query:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
        DKIIEIFADMEELGV+PDEDTVRR+  AF+KLGQ EN KMVYKRY C+WKYIHFKGERVRVR+DGWDEDD+
Subjt:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK

A0A5A7UD21 Pentatricopeptide repeat-containing protein5.2e-13288.19Show/hide
Query:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        ML   GSSTGFDALVPK  CIY +NK AFR ASV CVH QAAQ  TS TT ERR+V KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
Subjt:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAA+KALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTRSISKR+FSRMISLY+HHDLQ
Subjt:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ

Query:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
        DKIIEIFADMEELGV+PDEDTVRR+  AF+KLGQ EN KMVYKRY C+WKYIHFKGERVRVR+DGWDEDD+
Subjt:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK

A0A6J1CC95 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X18.0e-13388.19Show/hide
Query:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        M  YRG+S GFD LVPKK CI N+NKL FRAAS KC H QA Q  TSS T ERRIV KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG 
Subjt:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAA+KALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILH HTRSISK+LFSRMISLYDHHDLQ
Subjt:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ

Query:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
        DK+IEIFADMEELGV+PDEDTVRRVA AF+KLGQ EN KMV+KRYGCKWKYIHFKGERVRV+RDGWDEDD+
Subjt:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK

A0A6J1FWG3 pentatricopeptide repeat-containing protein At4g18975, chloroplastic6.5e-15199.26Show/hide
Query:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLT STTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
Subjt:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
Subjt:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ

Query:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
        DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQ ENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
Subjt:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK

A0A6J1K6G2 pentatricopeptide repeat-containing protein At4g18975, chloroplastic1.2e-14998.52Show/hide
Query:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
Subjt:  MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ
        LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMI+LYDHHDLQ
Subjt:  LNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQ

Query:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK
        DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQ ENGK VYKRYGCKWKYIHFK ERVRVRRDGWDEDDK
Subjt:  DKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK

SwissProt top hitse value%identityAlignment
Q2V3H0 Pentatricopeptide repeat-containing protein At4g18975, chloroplastic1.1e-8977.18Show/hide
Query:  KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLA
        KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IAA+KAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGTYD LLLA
Subjt:  KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLA

Query:  FDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGE
        FDMD+R DEAESLWNMILH HTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRVA AFR+L Q EN K++ +RY  ++KYI+F GE
Subjt:  FDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGE

Query:  RVRVRR
        RVRV+R
Subjt:  RVRVRR

Q8LG95 Pentatricopeptide repeat-containing protein At4g211903.9e-4445.18Show/hide
Query:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDE
        +WK R   G+  KA  ++  +    N KE VYG L+ +IAWE EFPL+   KAL IL    +WK++IQV KWMLSKGQG TMGTY +LL A   D R+DE
Subjt:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDE

Query:  AESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRY-GCKWKYIHFKGERVRVR
        AE LWN +   H     ++ F++MIS+Y   D+  K+ E+FADMEELGV+P+   V  V   F KL   +  + + K+Y   +W++ + KG RV+V+
Subjt:  AESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRY-GCKWKYIHFKGERVRVR

Arabidopsis top hitse value%identityAlignment
AT4G18975.1 Pentatricopeptide repeat (PPR) superfamily protein7.5e-9177.18Show/hide
Query:  KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLA
        KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IAA+KAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGTYD LLLA
Subjt:  KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLA

Query:  FDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGE
        FDMD+R DEAESLWNMILH HTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRVA AFR+L Q EN K++ +RY  ++KYI+F GE
Subjt:  FDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGE

Query:  RVRVRR
        RVRV+R
Subjt:  RVRVRR

AT4G18975.2 Pentatricopeptide repeat (PPR) superfamily protein7.5e-9177.18Show/hide
Query:  KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLA
        KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IAA+KAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGTYD LLLA
Subjt:  KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLA

Query:  FDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGE
        FDMD+R DEAESLWNMILH HTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRVA AFR+L Q EN K++ +RY  ++KYI+F GE
Subjt:  FDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGE

Query:  RVRVRR
        RVRV+R
Subjt:  RVRVRR

AT4G18975.3 Pentatricopeptide repeat (PPR) superfamily protein7.5e-9177.18Show/hide
Query:  KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLA
        KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IAA+KAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGTYD LLLA
Subjt:  KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLA

Query:  FDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGE
        FDMD+R DEAESLWNMILH HTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRVA AFR+L Q EN K++ +RY  ++KYI+F GE
Subjt:  FDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGE

Query:  RVRVRR
        RVRV+R
Subjt:  RVRVRR

AT4G18975.4 Pentatricopeptide repeat (PPR) superfamily protein7.5e-9177.18Show/hide
Query:  KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLA
        KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IAA+KAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGTYD LLLA
Subjt:  KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLA

Query:  FDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGE
        FDMD+R DEAESLWNMILH HTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRVA AFR+L Q EN K++ +RY  ++KYI+F GE
Subjt:  FDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGE

Query:  RVRVRR
        RVRV+R
Subjt:  RVRVRR

AT4G21190.1 Pentatricopeptide repeat (PPR) superfamily protein2.8e-4545.18Show/hide
Query:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDE
        +WK R   G+  KA  ++  +    N KE VYG L+ +IAWE EFPL+   KAL IL    +WK++IQV KWMLSKGQG TMGTY +LL A   D R+DE
Subjt:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDE

Query:  AESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRY-GCKWKYIHFKGERVRVR
        AE LWN +   H     ++ F++MIS+Y   D+  K+ E+FADMEELGV+P+   V  V   F KL   +  + + K+Y   +W++ + KG RV+V+
Subjt:  AESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQAENGKMVYKRY-GCKWKYIHFKGERVRVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGCTTACCGTGGAAGCTCAACTGGGTTCGATGCCCTCGTGCCGAAGAAAGTTTGCATTTACAATTACAACAAATTGGCATTTAGAGCTGCCAGTGTCAAGTGTGT
CCACAAGCAAGCTGCGCAGTCGCTTACAAGTTCCACCACAGCTGAGAGACGTATTGTTAAGAAGAAGGTTGGGAAGGAGGCCCACCATTTATGGAAGAAAAGAGATTCTG
CTGGCTCTGGCCAAAAAGCTCTGAATCTTGTTAGAATTGTCTCCCAATGCCCCAATGAGAAAGAAGCTGTATATGGAGAATTGAATAAGTGGATAGCTTGGGAGACGGAG
TTTCCATTGATTGCAGCTTCTAAAGCTTTAAGAATACTGAGGAAGAGAAGTCAATGGAAGCGTGTCATTCAAGTGGCAAAGTGGATGCTAAGCAAGGGTCAAGGTGCCAC
AATGGGTACCTATGACACTCTTCTTCTGGCATTTGATATGGACAAGAGGGTGGATGAAGCCGAATCTTTATGGAACATGATTTTGCATGCACATACTCGTTCCATCTCTA
AGCGACTGTTTTCTAGGATGATCTCTTTGTATGACCATCATGACTTGCAAGATAAGATTATTGAGATATTTGCAGACATGGAGGAGTTGGGAGTAAGGCCAGATGAAGAC
ACAGTTAGAAGAGTAGCCCACGCCTTTCGAAAACTAGGTCAAGCAGAAAACGGGAAAATGGTGTATAAAAGATATGGCTGCAAATGGAAATACATACATTTCAAGGGTGA
GAGGGTTAGAGTGAGAAGAGATGGATGGGATGAAGATGATAAATGA
mRNA sequenceShow/hide mRNA sequence
ACGATCATCATCCAAAGCTTGTGCAGGTAGAGTTTCGGTGCGCTTTGTTTAATTCCTGTAGTTGTTTCGCATATGTTCTCAGCCGTAGAGCCCTTCTTTATCTTGAATGA
ATCAACCCCTTCGGCCACAGCTCAATTTCTTTATTATACTTAATACCCAATACATTAAGCGCTGAAATTTGAAAAATCTGATGCTTGCTTACCGTGGAAGCTCAACTGGG
TTCGATGCCCTCGTGCCGAAGAAAGTTTGCATTTACAATTACAACAAATTGGCATTTAGAGCTGCCAGTGTCAAGTGTGTCCACAAGCAAGCTGCGCAGTCGCTTACAAG
TTCCACCACAGCTGAGAGACGTATTGTTAAGAAGAAGGTTGGGAAGGAGGCCCACCATTTATGGAAGAAAAGAGATTCTGCTGGCTCTGGCCAAAAAGCTCTGAATCTTG
TTAGAATTGTCTCCCAATGCCCCAATGAGAAAGAAGCTGTATATGGAGAATTGAATAAGTGGATAGCTTGGGAGACGGAGTTTCCATTGATTGCAGCTTCTAAAGCTTTA
AGAATACTGAGGAAGAGAAGTCAATGGAAGCGTGTCATTCAAGTGGCAAAGTGGATGCTAAGCAAGGGTCAAGGTGCCACAATGGGTACCTATGACACTCTTCTTCTGGC
ATTTGATATGGACAAGAGGGTGGATGAAGCCGAATCTTTATGGAACATGATTTTGCATGCACATACTCGTTCCATCTCTAAGCGACTGTTTTCTAGGATGATCTCTTTGT
ATGACCATCATGACTTGCAAGATAAGATTATTGAGATATTTGCAGACATGGAGGAGTTGGGAGTAAGGCCAGATGAAGACACAGTTAGAAGAGTAGCCCACGCCTTTCGA
AAACTAGGTCAAGCAGAAAACGGGAAAATGGTGTATAAAAGATATGGCTGCAAATGGAAATACATACATTTCAAGGGTGAGAGGGTTAGAGTGAGAAGAGATGGATGGGA
TGAAGATGATAAATGAACCAAACTGAAAGAAAAGAATTGAAGGGCAGAGACTCCTGAACTTCAACATGGATTAGCTCACAAGGTATTTATCTACCAATTTCCGTTAATTA
TATGCGTTCTATTTGCAGTCTAGTAACAGAGATAATGCAAACACTGTAATATATTAATATGATATGAAAAAGGTAGTGTATATGTTAATCAAGGAATTTATCTATCATGT
TTGGAGCAAGTTTGTTTTCTAGAACCATGGTTCTCTTTTAGCTTGAGGTATTGTAAG
Protein sequenceShow/hide protein sequence
MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETE
FPLIAASKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDED
TVRRVAHAFRKLGQAENGKMVYKRYGCKWKYIHFKGERVRVRRDGWDEDDK