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Carg18348 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18348
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionthioredoxin H1-like
Genome locationCarg_Chr04:926090..926767
RNA-Seq ExpressionCarg18348
SyntenyCarg18348
Gene Ontology termsNA
InterPro domainsIPR013766 - Thioredoxin domain
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600023.1 Thioredoxin H4, partial [Cucurbita argyrosperma subsp. sororia]9.6e-5898.25Show/hide
Query:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
        MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNV FLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKF GA
Subjt:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA

Query:  KKDLLLNTVSKHSA
        KKDLLLNTVSKHSA
Subjt:  KKDLLLNTVSKHSA

XP_022942758.1 thioredoxin H1-like [Cucurbita moschata]6.7e-59100Show/hide
Query:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
        MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
Subjt:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA

Query:  KKDLLLNTVSKHSA
        KKDLLLNTVSKHSA
Subjt:  KKDLLLNTVSKHSA

XP_022996723.1 thioredoxin H-type-like [Cucurbita maxima]1.4e-5695.61Show/hide
Query:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
        MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAP+LD+LAKKSCNNVTFLKVDVD+LMSVANELGVGALPSFQFFKNGQLVDKFVGA
Subjt:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA

Query:  KKDLLLNTVSKHSA
        KKD+LLN VSKHSA
Subjt:  KKDLLLNTVSKHSA

XP_023549191.1 thioredoxin H4-like [Cucurbita pepo subsp. pepo]4.8e-5796.49Show/hide
Query:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
        MADMGKVVSCPTV SWK+QFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
Subjt:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA

Query:  KKDLLLNTVSKHSA
        KKD+LLNTVSKH+A
Subjt:  KKDLLLNTVSKHSA

XP_038893273.1 thioredoxin H1-like [Benincasa hispida]6.5e-4684.07Show/hide
Query:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNN-VTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVG
        MADMGKVVSC TVGSWKQQ LKAKQ+NKL+VVNFTATWC PCR MAP+L+DLA K  NN V FLKVDVDELMSVANELGVGALPSFQFFKNG+LVDKFVG
Subjt:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNN-VTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVG

Query:  AKKDLLLNTVSKH
        A+KD+L +TVSKH
Subjt:  AKKDLLLNTVSKH

TrEMBL top hitse value%identityAlignment
A0A1S3CMM6 thioredoxin H1-like1.2e-4581.58Show/hide
Query:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
        M DMGKVVSC TVGSWKQQ LKAKQ+NKL+VVNFTATWC PCR MAP+L DLA K  NNV  LKVDVDELMSVANE GVGALPSFQFFKNG+LVDKFVGA
Subjt:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA

Query:  KKDLLLNTVSKHSA
        +KD+L  TVSKH A
Subjt:  KKDLLLNTVSKHSA

A0A5D3DCH1 Thioredoxin H1-like1.2e-4581.58Show/hide
Query:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
        M DMGKVVSC TVGSWKQQ LKAKQ+NKL+VVNFTATWC PCR MAP+L DLA K  NNV  LKVDVDELMSVANE GVGALPSFQFFKNG+LVDKFVGA
Subjt:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA

Query:  KKDLLLNTVSKHSA
        +KD+L  TVSKH A
Subjt:  KKDLLLNTVSKHSA

A0A6J1CDG5 thioredoxin H1-like1.6e-4580.7Show/hide
Query:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
        MA+MGKVVSC +VGSWKQQ LKAK++NKL+VV FTATWC PCRAMAP+L+DLAKK+ +NV FLKVDVDELM VANELGVGA+PSFQFFKNG+LVDKFVGA
Subjt:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA

Query:  KKDLLLNTVSKHSA
         KDLL NT+SKH+A
Subjt:  KKDLLLNTVSKHSA

A0A6J1FVM4 thioredoxin H1-like3.2e-59100Show/hide
Query:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
        MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
Subjt:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA

Query:  KKDLLLNTVSKHSA
        KKDLLLNTVSKHSA
Subjt:  KKDLLLNTVSKHSA

A0A6J1KBU8 thioredoxin H-type-like6.7e-5795.61Show/hide
Query:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
        MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAP+LD+LAKKSCNNVTFLKVDVD+LMSVANELGVGALPSFQFFKNGQLVDKFVGA
Subjt:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA

Query:  KKDLLLNTVSKHSA
        KKD+LLN VSKHSA
Subjt:  KKDLLLNTVSKHSA

SwissProt top hitse value%identityAlignment
P29448 Thioredoxin H11.3e-2852.21Show/hide
Query:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK
        ++ G+V++C TV +W +Q  KA +   L+VV+FTA+WC PCR +AP   DLAKK   NV FLKVD DEL SVA++  + A+P+F F K G+++DK VGAK
Subjt:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK

Query:  KDLLLNTVSKHSA
        KD L +T++KH A
Subjt:  KDLLLNTVSKHSA

Q07090 Thioredoxin H-type 24.5e-2651.79Show/hide
Query:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
        MA+ G+V+   TV +W +   K     KL+VV+FTA+WC PC+ +A    +LAKK    VTFLKVDVDEL SVA +  V A+P+F F K G++VDK VGA
Subjt:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA

Query:  KKDLLLNTVSKH
        KKD L  T++KH
Subjt:  KKDLLLNTVSKH

Q39239 Thioredoxin H47.5e-2952.68Show/hide
Query:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK
        A+ G+V+ C T   W  Q  KAK+ NKL+V++FTA+WC PCR +AP+ +DLAKK  ++  F KVDVDEL SVA E GV A+P+F F K G++VDK VGA 
Subjt:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK

Query:  KDLLLNTVSKHS
        K+ L   + KH+
Subjt:  KDLLLNTVSKHS

Q39362 Thioredoxin H-type 23.7e-2850.89Show/hide
Query:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK
        A+ G+V+ C  +  W  Q   AKQ NKL+V++FTA+WC PCR +AP+  DLAKK  ++  F KVDVDEL +VA E GV A+P+F   K+G +VDK VGA+
Subjt:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK

Query:  KDLLLNTVSKHS
        K+ L  T++KH+
Subjt:  KDLLLNTVSKHS

Q43636 Thioredoxin H-type5.7e-2953.98Show/hide
Query:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK
        A+ G+V+ C TV +W +Q  K      L+VV+FTA+WC PCR +AP L +LAKK   NVTFLKVDVDEL +VA+E  V ++P+F F K G+++DK VGAK
Subjt:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK

Query:  KDLLLNTVSKHSA
        KD L  T++KH A
Subjt:  KDLLLNTVSKHSA

Arabidopsis top hitse value%identityAlignment
AT1G19730.1 Thioredoxin superfamily protein5.3e-3052.68Show/hide
Query:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK
        A+ G+V+ C T   W  Q  KAK+ NKL+V++FTA+WC PCR +AP+ +DLAKK  ++  F KVDVDEL SVA E GV A+P+F F K G++VDK VGA 
Subjt:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK

Query:  KDLLLNTVSKHS
        K+ L   + KH+
Subjt:  KDLLLNTVSKHS

AT1G45145.1 thioredoxin H-type 51.4e-2545.54Show/hide
Query:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
        MA  G+V++C T+  W ++   A +  KL+V++FTA+WC PCR +AP+  ++AKK   NV F K+DVDEL +VA E  V A+P+F F K G ++D+ VGA
Subjt:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA

Query:  KKDLLLNTVSKH
         KD +   + KH
Subjt:  KKDLLLNTVSKH

AT3G51030.1 thioredoxin H-type 19.0e-3052.21Show/hide
Query:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK
        ++ G+V++C TV +W +Q  KA +   L+VV+FTA+WC PCR +AP   DLAKK   NV FLKVD DEL SVA++  + A+P+F F K G+++DK VGAK
Subjt:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK

Query:  KDLLLNTVSKHSA
        KD L +T++KH A
Subjt:  KDLLLNTVSKHSA

AT5G39950.1 thioredoxin 25.9e-2142.73Show/hide
Query:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK
        ++  +V+   +   W+  F + K+ NKLLVV+F+A+WC PCR + P +  +A K  N+V F+K+DVDEL  VA E  V A+P+F   K G+ +++ +GAK
Subjt:  ADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAK

Query:  KDLLLNTVSK
        KD L   VSK
Subjt:  KDLLLNTVSK

AT5G42980.1 thioredoxin 32.3e-2547.32Show/hide
Query:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA
        MA  G+V++C TV  W ++   A +  KL+V++FTATWC PCR +AP+  DLAKK   +V F KVDVDEL +VA E  V A+P+F F K G++ +  VGA
Subjt:  MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGA

Query:  KKDLLLNTVSKH
         K+ ++  + KH
Subjt:  KKDLLLNTVSKH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACATGGGGAAAGTGGTTTCTTGCCCCACAGTTGGCTCATGGAAGCAACAGTTCCTCAAAGCCAAACAACACAACAAACTGCTGGTTGTCAATTTCACTGCAAC
ATGGTGCCGCCCGTGTCGTGCCATGGCTCCACTGCTCGACGATTTAGCAAAGAAATCGTGCAATAACGTAACGTTCTTGAAAGTCGACGTTGATGAACTCATGAGTGTTG
CCAATGAGTTAGGAGTGGGCGCCCTTCCATCGTTTCAATTCTTCAAGAACGGACAGTTGGTGGACAAGTTCGTGGGCGCAAAGAAAGATCTATTGCTCAACACTGTGTCT
AAACATAGCGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGACATGGGGAAAGTGGTTTCTTGCCCCACAGTTGGCTCATGGAAGCAACAGTTCCTCAAAGCCAAACAACACAACAAACTGCTGGTTGTCAATTTCACTGCAAC
ATGGTGCCGCCCGTGTCGTGCCATGGCTCCACTGCTCGACGATTTAGCAAAGAAATCGTGCAATAACGTAACGTTCTTGAAAGTCGACGTTGATGAACTCATGAGTGTTG
CCAATGAGTTAGGAGTGGGCGCCCTTCCATCGTTTCAATTCTTCAAGAACGGACAGTTGGTGGACAAGTTCGTGGGCGCAAAGAAAGATCTATTGCTCAACACTGTGTCT
AAACATAGCGCATGAAGCTGGTCTTTTCATCAGAATTTGCTTTTCATAAATAAACAACAATGCTGCAAAGAAACATTAAATGTTGTGCAACAAATTTACACGTTTATGTT
CTATGGAGATGGTCAGTGAATCTTTGTCATGGCTATCAACCAACCCTCTCTGGATTAATAAATCTTTTGTTCTTCCAAACC
Protein sequenceShow/hide protein sequence
MADMGKVVSCPTVGSWKQQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDLLLNTVS
KHSA