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Carg18399 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18399
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr20:660459..661309
RNA-Seq ExpressionCarg18399
SyntenyCarg18399
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570456.1 Replication factor C subunit 1, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2078.95Show/hide
Query:  MKAHDKDSGNASKHAKPAPSNFEKSASAELYSPEKQCL-------LTLLFLAKGCTSERVKAARYVGIATGGTPLG
        MKAHDKDSGNASKHAKPAPSNFEKSASAELYSPEK  +       L  +   KGCTSERVKAARYVGIATGGTPLG
Subjt:  MKAHDKDSGNASKHAKPAPSNFEKSASAELYSPEKQCL-------LTLLFLAKGCTSERVKAARYVGIATGGTPLG
KAG7010319.1 hypothetical protein SDJN02_27112, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-38100Show/hide
Query:  MKAHDKDSGNASKHAKPAPSNFEKSASAELYSPEKQCLLTLLFLAKGCTSERVKAARYVGIATGGTPLGMPGDSYGNCWNGS
        MKAHDKDSGNASKHAKPAPSNFEKSASAELYSPEKQCLLTLLFLAKGCTSERVKAARYVGIATGGTPLGMPGDSYGNCWNGS
Subjt:  MKAHDKDSGNASKHAKPAPSNFEKSASAELYSPEKQCLLTLLFLAKGCTSERVKAARYVGIATGGTPLGMPGDSYGNCWNGS
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCACACGATAAAGACAGCGGCAATGCGTCAAAGCATGCAAAACCTGCTCCAAGCAATTTTGAGAAATCCGCTTCAGCTGAACTCTACAGTCCGGAAAAACAGTG
TCTTCTGACCCTACTCTTCTTAGCAAAAGGATGCACTTCAGAACGAGTAAAAGCAGCTAGATATGTTGGAATTGCTACAGGTGGAACTCCTCTGGGCATGCCTGGAGATT
CTTATGGTAACTGCTGGAATGGAAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCACACGATAAAGACAGCGGCAATGCGTCAAAGCATGCAAAACCTGCTCCAAGCAATTTTGAGAAATCCGCTTCAGCTGAACTCTACAGTCCGGAAAAACAGTG
TCTTCTGACCCTACTCTTCTTAGCAAAAGGATGCACTTCAGAACGAGTAAAAGCAGCTAGATATGTTGGAATTGCTACAGGTGGAACTCCTCTGGGCATGCCTGGAGATT
CTTATGGTAACTGCTGGAATGGAAGCTGA
Protein sequenceShow/hide protein sequence
MKAHDKDSGNASKHAKPAPSNFEKSASAELYSPEKQCLLTLLFLAKGCTSERVKAARYVGIATGGTPLGMPGDSYGNCWNGS