; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg18403 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18403
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUbiquitin carboxyl-terminal hydrolase
Genome locationCarg_Chr20:684384..684997
RNA-Seq ExpressionCarg18403
SyntenyCarg18403
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061739.1 hypothetical protein E6C27_scaffold212G001140 [Cucumis melo var. makuwa]1.1e-3588.37Show/hide
Query:  VGVTMRQQGQYPDSGLGSYSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDESKMPNSMASHMFNEGK
        V VTMRQQGQY DSGLG+YSVSQMH VPSQ +EQSHPDPFEGRLEAFTPERE+SY+ASKNEDQWRWERDESKMPNSM SHMFNEG+
Subjt:  VGVTMRQQGQYPDSGLGSYSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDESKMPNSMASHMFNEGK

KAG7010323.1 hypothetical protein SDJN02_27116, partial [Cucurbita argyrosperma subsp. argyrosperma]6.2e-60100Show/hide
Query:  MASRPLQFQEYLKFWSRGAGVLVLVLGLGMVGVTMRQQGQYPDSGLGSYSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDE
        MASRPLQFQEYLKFWSRGAGVLVLVLGLGMVGVTMRQQGQYPDSGLGSYSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDE
Subjt:  MASRPLQFQEYLKFWSRGAGVLVLVLGLGMVGVTMRQQGQYPDSGLGSYSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDE

Query:  SKMPNSMASHMFNEGKH
        SKMPNSMASHMFNEGKH
Subjt:  SKMPNSMASHMFNEGKH

TYJ96079.1 hypothetical protein E5676_scaffold182G00380 [Cucumis melo var. makuwa]2.2e-4177.59Show/hide
Query:  MASRPLQFQEYLKFWSRGAGVLVLVLGLGMVGVTMRQQGQYPDSGLGSYSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDE
        MASRPLQFQE L FWS              V VTMRQQGQY DSGLG+YSVSQMH VPSQ +EQSHPDPFEGRLEAFTPERE+SY+ASKNEDQWRWERDE
Subjt:  MASRPLQFQEYLKFWSRGAGVLVLVLGLGMVGVTMRQQGQYPDSGLGSYSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDE

Query:  SKMPNSMASHMFNEGK
        SKMPNSM SHMFNEG+
Subjt:  SKMPNSMASHMFNEGK

XP_022986988.1 uncharacterized protein LOC111484575 [Cucurbita maxima]9.0e-3593.9Show/hide
Query:  MRQQGQYPDSGLGSYSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDESKMPNSMASHMFNEGK
        MRQQ QY DSGLGSYSVSQMHQVPSQR+EQSHPDPFEGRLEAFTPERENSYIASKNEDQWR ERDESKMPNSMASHMFNEG+
Subjt:  MRQQGQYPDSGLGSYSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDESKMPNSMASHMFNEGK

XP_023512046.1 uncharacterized protein LOC111776883 [Cucurbita pepo subsp. pepo]1.5e-3796.34Show/hide
Query:  MRQQGQYPDSGLGSYSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDESKMPNSMASHMFNEGK
        MRQQGQY DSGLGSYSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSY+ASKNEDQWRWERDESKMPNSMASHMFNEG+
Subjt:  MRQQGQYPDSGLGSYSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDESKMPNSMASHMFNEGK

TrEMBL top hitse value%identityAlignment
A0A5A7V7U3 Uncharacterized protein5.1e-3688.37Show/hide
Query:  VGVTMRQQGQYPDSGLGSYSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDESKMPNSMASHMFNEGK
        V VTMRQQGQY DSGLG+YSVSQMH VPSQ +EQSHPDPFEGRLEAFTPERE+SY+ASKNEDQWRWERDESKMPNSM SHMFNEG+
Subjt:  VGVTMRQQGQYPDSGLGSYSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDESKMPNSMASHMFNEGK

A0A5D3BAP0 Uncharacterized protein1.1e-4177.59Show/hide
Query:  MASRPLQFQEYLKFWSRGAGVLVLVLGLGMVGVTMRQQGQYPDSGLGSYSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDE
        MASRPLQFQE L FWS              V VTMRQQGQY DSGLG+YSVSQMH VPSQ +EQSHPDPFEGRLEAFTPERE+SY+ASKNEDQWRWERDE
Subjt:  MASRPLQFQEYLKFWSRGAGVLVLVLGLGMVGVTMRQQGQYPDSGLGSYSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDE

Query:  SKMPNSMASHMFNEGK
        SKMPNSM SHMFNEG+
Subjt:  SKMPNSMASHMFNEGK

A0A6J1H5U1 uncharacterized protein LOC1114598385.7e-3590.24Show/hide
Query:  MRQQGQYPDSGLGSYSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDESKMPNSMASHMFNEGK
        MRQQGQY DSGL SYS SQMH VPSQR+EQSHPDPFEGRLEAFTPERENS++ASKNEDQWRWERDESKMPNSMASHMFNEG+
Subjt:  MRQQGQYPDSGLGSYSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDESKMPNSMASHMFNEGK

A0A6J1JI55 uncharacterized protein LOC1114845754.4e-3593.9Show/hide
Query:  MRQQGQYPDSGLGSYSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDESKMPNSMASHMFNEGK
        MRQQ QY DSGLGSYSVSQMHQVPSQR+EQSHPDPFEGRLEAFTPERENSYIASKNEDQWR ERDESKMPNSMASHMFNEG+
Subjt:  MRQQGQYPDSGLGSYSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDESKMPNSMASHMFNEGK

A0A6J1K145 uncharacterized protein LOC1114907595.7e-3590.24Show/hide
Query:  MRQQGQYPDSGLGSYSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDESKMPNSMASHMFNEGK
        MRQQGQY DSGL SYS SQMH VPSQR+EQSHPDPFEGRLEAFTPERENS++ASKNEDQWRWERDESKMPNSMASHMFNEG+
Subjt:  MRQQGQYPDSGLGSYSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDESKMPNSMASHMFNEGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G22040.1 unknown protein9.6e-1144.58Show/hide
Query:  MRQQGQYPDSGLGS-YSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDESKMPNSMASHMFNEGK
        MR+QG + DS   S Y   Q        ++  H D F+G+LEAFTPER+  Y  S+ E QWRWERD   M   MA+ ++NEG+
Subjt:  MRQQGQYPDSGLGS-YSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDESKMPNSMASHMFNEGK

AT5G22040.2 unknown protein9.6e-1144.58Show/hide
Query:  MRQQGQYPDSGLGS-YSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDESKMPNSMASHMFNEGK
        MR+QG + DS   S Y   Q        ++  H D F+G+LEAFTPER+  Y  S+ E QWRWERD   M   MA+ ++NEG+
Subjt:  MRQQGQYPDSGLGS-YSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDESKMPNSMASHMFNEGK

AT5G22040.3 unknown protein9.6e-1144.58Show/hide
Query:  MRQQGQYPDSGLGS-YSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDESKMPNSMASHMFNEGK
        MR+QG + DS   S Y   Q        ++  H D F+G+LEAFTPER+  Y  S+ E QWRWERD   M   MA+ ++NEG+
Subjt:  MRQQGQYPDSGLGS-YSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDESKMPNSMASHMFNEGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCACGGCCACTTCAGTTTCAAGAATACTTAAAATTTTGGTCTAGAGGGGCTGGGGTGTTGGTCTTGGTCTTGGGATTGGGAATGGTGGGCGTAACAATGAGACA
GCAGGGGCAATATCCTGATTCAGGACTTGGCTCATATTCAGTTTCTCAAATGCATCAAGTTCCCAGTCAAAGGATGGAACAAAGCCACCCTGATCCTTTTGAAGGACGGC
TGGAAGCCTTCACTCCAGAGAGAGAGAATTCATATATAGCTTCGAAAAATGAGGATCAATGGAGATGGGAAAGAGATGAGTCGAAGATGCCAAATTCTATGGCCTCTCAC
ATGTTCAATGAAGGCAAGCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCACGGCCACTTCAGTTTCAAGAATACTTAAAATTTTGGTCTAGAGGGGCTGGGGTGTTGGTCTTGGTCTTGGGATTGGGAATGGTGGGCGTAACAATGAGACA
GCAGGGGCAATATCCTGATTCAGGACTTGGCTCATATTCAGTTTCTCAAATGCATCAAGTTCCCAGTCAAAGGATGGAACAAAGCCACCCTGATCCTTTTGAAGGACGGC
TGGAAGCCTTCACTCCAGAGAGAGAGAATTCATATATAGCTTCGAAAAATGAGGATCAATGGAGATGGGAAAGAGATGAGTCGAAGATGCCAAATTCTATGGCCTCTCAC
ATGTTCAATGAAGGCAAGCATTAA
Protein sequenceShow/hide protein sequence
MASRPLQFQEYLKFWSRGAGVLVLVLGLGMVGVTMRQQGQYPDSGLGSYSVSQMHQVPSQRMEQSHPDPFEGRLEAFTPERENSYIASKNEDQWRWERDESKMPNSMASH
MFNEGKH