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Carg18408 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18408
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr20:706180..708143
RNA-Seq ExpressionCarg18408
SyntenyCarg18408
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010328.1 hypothetical protein SDJN02_27121, partial [Cucurbita argyrosperma subsp. argyrosperma]5.9e-140100Show/hide
Query:  MDIRRRLLFQFSHTFNKPSNGLYRFENQFPGGSECLECLMRYKMYYRHLYHSISGLEHRILKAMNEQPKSALDYDVAKMEEVWVFPVDGGGGLGGGNAAG
        MDIRRRLLFQFSHTFNKPSNGLYRFENQFPGGSECLECLMRYKMYYRHLYHSISGLEHRILKAMNEQPKSALDYDVAKMEEVWVFPVDGGGGLGGGNAAG
Subjt:  MDIRRRLLFQFSHTFNKPSNGLYRFENQFPGGSECLECLMRYKMYYRHLYHSISGLEHRILKAMNEQPKSALDYDVAKMEEVWVFPVDGGGGLGGGNAAG

Query:  LPEKNRPSGNFTSIRQWNQIYSYAFREVAAVAAVSDRGRGGSDCDSGVSGSGASFSFGHAGFRLMNPFGFFIIIANRWKFITELDNLATSSIGISDSSAS
        LPEKNRPSGNFTSIRQWNQIYSYAFREVAAVAAVSDRGRGGSDCDSGVSGSGASFSFGHAGFRLMNPFGFFIIIANRWKFITELDNLATSSIGISDSSAS
Subjt:  LPEKNRPSGNFTSIRQWNQIYSYAFREVAAVAAVSDRGRGGSDCDSGVSGSGASFSFGHAGFRLMNPFGFFIIIANRWKFITELDNLATSSIGISDSSAS

Query:  KSSLSSTIFHSLTNKFAGVVTKERTRRPSRRSARKFFFEGTETASRINRPFSRRD
        KSSLSSTIFHSLTNKFAGVVTKERTRRPSRRSARKFFFEGTETASRINRPFSRRD
Subjt:  KSSLSSTIFHSLTNKFAGVVTKERTRRPSRRSARKFFFEGTETASRINRPFSRRD
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATACGAAGAAGGCTGTTGTTCCAATTTTCACACACCTTCAATAAGCCATCAAATGGATTGTATAGGTTCGAGAATCAGTTTCCTGGTGGCAGTGAATGTTTAGA
ATGTTTGATGCGCTACAAGATGTATTATCGACACTTGTACCATTCAATATCGGGTCTCGAGCACCGAATTTTGAAGGCCATGAATGAGCAACCCAAATCAGCGTTGGATT
ATGATGTTGCAAAAATGGAAGAGGTATGGGTTTTTCCGGTCGACGGCGGCGGTGGCTTAGGTGGTGGCAATGCAGCAGGGCTCCCGGAGAAGAACAGACCTTCTGGGAAC
TTTACATCCATTCGACAATGGAACCAAATATACTCGTATGCATTCAGAGAAGTCGCTGCTGTCGCCGCCGTGAGCGACCGAGGACGCGGTGGAAGTGACTGTGATAGTGG
GGTTAGTGGCTCTGGAGCATCTTTTTCCTTTGGCCATGCCGGATTCCGATTGATGAATCCATTTGGCTTCTTCATCATCATTGCTAATCGATGGAAGTTCATAACAGAGC
TCGACAATCTCGCAACCTCATCCATCGGGATTTCCGATTCGTCGGCTTCCAAATCGTCTCTCTCTTCGACAATTTTCCATTCTTTAACCAATAAATTCGCCGGAGTTGTA
ACAAAAGAGAGAACGAGACGGCCATCTCGGCGATCGGCGCGGAAATTCTTCTTTGAGGGAACAGAGACGGCGTCGAGAATTAACCGCCCATTTTCCCGGCGGGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATATACGAAGAAGGCTGTTGTTCCAATTTTCACACACCTTCAATAAGCCATCAAATGGATTGTATAGGTTCGAGAATCAGTTTCCTGGTGGCAGTGAATGTTTAGA
ATGTTTGATGCGCTACAAGATGTATTATCGACACTTGTACCATTCAATATCGGGTCTCGAGCACCGAATTTTGAAGGCCATGAATGAGCAACCCAAATCAGCGTTGGATT
ATGATGTTGCAAAAATGGAAGAGGTATGGGTTTTTCCGGTCGACGGCGGCGGTGGCTTAGGTGGTGGCAATGCAGCAGGGCTCCCGGAGAAGAACAGACCTTCTGGGAAC
TTTACATCCATTCGACAATGGAACCAAATATACTCGTATGCATTCAGAGAAGTCGCTGCTGTCGCCGCCGTGAGCGACCGAGGACGCGGTGGAAGTGACTGTGATAGTGG
GGTTAGTGGCTCTGGAGCATCTTTTTCCTTTGGCCATGCCGGATTCCGATTGATGAATCCATTTGGCTTCTTCATCATCATTGCTAATCGATGGAAGTTCATAACAGAGC
TCGACAATCTCGCAACCTCATCCATCGGGATTTCCGATTCGTCGGCTTCCAAATCGTCTCTCTCTTCGACAATTTTCCATTCTTTAACCAATAAATTCGCCGGAGTTGTA
ACAAAAGAGAGAACGAGACGGCCATCTCGGCGATCGGCGCGGAAATTCTTCTTTGAGGGAACAGAGACGGCGTCGAGAATTAACCGCCCATTTTCCCGGCGGGACTGA
Protein sequenceShow/hide protein sequence
MDIRRRLLFQFSHTFNKPSNGLYRFENQFPGGSECLECLMRYKMYYRHLYHSISGLEHRILKAMNEQPKSALDYDVAKMEEVWVFPVDGGGGLGGGNAAGLPEKNRPSGN
FTSIRQWNQIYSYAFREVAAVAAVSDRGRGGSDCDSGVSGSGASFSFGHAGFRLMNPFGFFIIIANRWKFITELDNLATSSIGISDSSASKSSLSSTIFHSLTNKFAGVV
TKERTRRPSRRSARKFFFEGTETASRINRPFSRRD