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Carg18416 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18416
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDUF1279 domain-containing protein
Genome locationCarg_Chr20:750039..751443
RNA-Seq ExpressionCarg18416
SyntenyCarg18416
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009688 - Protein FAM210A/B-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570471.1 Family With Sequence Similarity 210 Member B, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.8e-9999.49Show/hide
Query:  MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
        MATAPSPIC SSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
Subjt:  MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK

Query:  GDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN
        GDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN
Subjt:  GDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN
KAG7010336.1 hypothetical protein SDJN02_27129 [Cucurbita argyrosperma subsp. argyrosperma]6.1e-100100Show/hide
Query:  MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
        MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
Subjt:  MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK

Query:  GDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN
        GDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN
Subjt:  GDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN
XP_022943302.1 uncharacterized protein LOC111448115 [Cucurbita moschata]5.1e-9998.99Show/hide
Query:  MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
        MATAPSPIC SSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
Subjt:  MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK

Query:  GDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN
        GDQAKELLAKYGGAYLATSITLSLISFA CYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN
Subjt:  GDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN
XP_023512163.1 uncharacterized protein LOC111776967 [Cucurbita pepo subsp. pepo]1.5e-9898.48Show/hide
Query:  MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
        MATAPSPIC SSSFISSPASFPDTNFRFPFSSSV+PPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
Subjt:  MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK

Query:  GDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN
        GDQAKELLAKYGGAYLATSITLSLISFA CYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN
Subjt:  GDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN
XP_038901803.1 uncharacterized protein LOC120088508 [Benincasa hispida]2.7e-7180.3Show/hide
Query:  MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERP--SPSQSPSSSSADEVTKKYGLEAGLWKIFSSK---EEGEG
        MATA S I  SSS I    SF D NFRF F+    P KFN KR RVQALK+KTGEIERP  S S S SSSSADEVTKKYGLEAGLWKIFSSK   EEGEG
Subjt:  MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERP--SPSQSPSSSSADEVTKKYGLEAGLWKIFSSK---EEGEG

Query:  KDKSKGDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVE
        K+KSKGDQAKELLAKYGGAYLATSITLSLISF+ CYALISAGVDVQALLQKVGIS D  GEKVGTFALAYAAHKA SPIRFPPTVALT +VA+WIGKKVE
Subjt:  KDKSKGDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVE

Query:  EEN
        +EN
Subjt:  EEN
TrEMBL top hitse value%identityAlignment
A0A0A0KEW3 DUF1279 domain-containing protein8.3e-7179.8Show/hide
Query:  MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
        MA A S I  SS   SS  SF   NFRF F+    P KFN K  RVQALK+KTGEIERPSPS   SSSSADEVTKKYGLEAGLWKIFSSKEEGEG +KSK
Subjt:  MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK

Query:  GDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN
        GDQAKELLAKYGGAYLATSITLSLISF+ CYALISAGVDVQ LLQKVGIS+D  GEKVGTFALAYAAHKA SPIRFPPTVALT +VA+WIGKKVE+EN
Subjt:  GDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN
A0A1S3BN10 uncharacterized protein LOC1034914279.2e-7079.29Show/hide
Query:  MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
        MATA S I  SS    S  SF   NFRF F+    P KFN K  RVQALK+KTGEI+RPSPS   SSSSADEVTKKYGLEAGLWKIFSSKEEGEG +KSK
Subjt:  MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK

Query:  GDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN
        GDQAKELLAKYGGAYLATSITLSLISF+ CYALISAGVDVQALLQKVGIS D  G KVGTFALAYAAHKA SPIRFPPTVALT +VA+WIGKKVE+EN
Subjt:  GDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN
A0A5D3B9U1 DUF1279 domain-containing protein9.2e-7079.29Show/hide
Query:  MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
        MATA S I  SS    S  SF   NFRF F+    P KFN K  RVQALK+KTGEI+RPSPS   SSSSADEVTKKYGLEAGLWKIFSSKEEGEG +KSK
Subjt:  MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK

Query:  GDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN
        GDQAKELLAKYGGAYLATSITLSLISF+ CYALISAGVDVQALLQKVGIS D  G KVGTFALAYAAHKA SPIRFPPTVALT +VA+WIGKKVE+EN
Subjt:  GDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN
A0A6J1FSN5 uncharacterized protein LOC1114481152.5e-9998.99Show/hide
Query:  MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
        MATAPSPIC SSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
Subjt:  MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK

Query:  GDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN
        GDQAKELLAKYGGAYLATSITLSLISFA CYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN
Subjt:  GDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN
A0A6J1JG12 uncharacterized protein LOC1114841822.5e-9998.99Show/hide
Query:  MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
        MATAPSPIC SSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
Subjt:  MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK

Query:  GDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN
        GDQAKELLAKYGGAYLATSITLSLISFA CYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN
Subjt:  GDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN
SwissProt top hitse value%identityAlignment
Q96KR6 Protein FAM210B, mitochondrial2.4e-0633.01Show/hide
Query:  EGKDKSKGDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKV----GTFALAYAAHKATSPIRFPPTVALTSVVATW
        E K +SK  Q K++  +YG   ++  I +SLIS    Y ++S+GVD+ A+L K+G        K+     TF +AYA HK  +P+R   T+    ++  +
Subjt:  EGKDKSKGDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKV----GTFALAYAAHKATSPIRFPPTVALTSVVATW

Query:  IGK
          K
Subjt:  IGK
Q9D8B6 Protein FAM210B, mitochondrial4.5e-0532.99Show/hide
Query:  GEGKDKSKGDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKV----GTFALAYAAHKATSPIRFPPTVALTSV
        G  K  S+  Q K++  +YG   ++  I +SL+S    Y ++S+G+D+ A+L K+G        K+     TF +AYA HK  +P+R   ++ L SV
Subjt:  GEGKDKSKGDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKV----GTFALAYAAHKATSPIRFPPTVALTSV
Arabidopsis top hitse value%identityAlignment
AT2G27290.1 Protein of unknown function (DUF1279)5.0e-5265.91Show/hide
Query:  FSSSVRPPKFNPKRLRVQALKEKTGEIER--PSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKD------KSKGDQAKELLAKYGGAYLATSIT
        F SSV     + K+ R +A++EK  +I++    PS SP   SA+EVTKKYGLE GLWKI SSK++ EG D      KSK D+AKELLAKYGGAYLATSIT
Subjt:  FSSSVRPPKFNPKRLRVQALKEKTGEIER--PSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKD------KSKGDQAKELLAKYGGAYLATSIT

Query:  LSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEE
        LSLISF+ CY L+++GVDVQALL KVGIS +  GEKVG FALAYAAHKA SPIRFPPTVALT +VA WIGKKV++E
Subjt:  LSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGCTCCTTCTCCAATTTGCCTTTCATCTTCTTTCATTTCCTCTCCTGCTTCCTTTCCCGATACAAATTTCAGATTTCCCTTTAGTTCTTCTGTTCGACCTCC
GAAATTCAATCCCAAAAGGCTCAGGGTTCAAGCCCTTAAAGAGAAAACCGGCGAAATCGAACGCCCATCTCCATCTCAATCTCCGTCTTCCTCTTCAGCAGATGAAGTTA
CCAAGAAGTATGGACTTGAAGCTGGTCTCTGGAAGATATTTAGCTCAAAGGAGGAGGGTGAAGGAAAAGACAAATCAAAGGGGGATCAGGCAAAGGAGCTGCTTGCAAAA
TATGGAGGTGCATATTTAGCCACCTCCATAACTCTATCCCTGATCTCTTTCGCTGCGTGTTACGCGCTCATCAGCGCCGGTGTCGACGTTCAAGCTCTTCTGCAGAAGGT
AGGAATTTCGGTTGATGGGAATGGAGAGAAAGTTGGAACGTTTGCATTGGCATATGCAGCGCATAAAGCAACTTCTCCAATAAGGTTCCCTCCAACAGTGGCCCTTACTT
CAGTGGTTGCAACTTGGATTGGGAAGAAAGTAGAGGAAGAGAATTAG
mRNA sequenceShow/hide mRNA sequence
AAATATCTGGCTTACAACGCTTCACATAAAATTCTGTTTCTCTTTGATCTCGTGGGATTCTCGTTTCCCATCCTCCGAATTCAGAGGGCATGCCTCATTACTAGATTCCG
ACCTCTGATTTTCTGATAATGGCGACTGCTCCTTCTCCAATTTGCCTTTCATCTTCTTTCATTTCCTCTCCTGCTTCCTTTCCCGATACAAATTTCAGATTTCCCTTTAG
TTCTTCTGTTCGACCTCCGAAATTCAATCCCAAAAGGCTCAGGGTTCAAGCCCTTAAAGAGAAAACCGGCGAAATCGAACGCCCATCTCCATCTCAATCTCCGTCTTCCT
CTTCAGCAGATGAAGTTACCAAGAAGTATGGACTTGAAGCTGGTCTCTGGAAGATATTTAGCTCAAAGGAGGAGGGTGAAGGAAAAGACAAATCAAAGGGGGATCAGGCA
AAGGAGCTGCTTGCAAAATATGGAGGTGCATATTTAGCCACCTCCATAACTCTATCCCTGATCTCTTTCGCTGCGTGTTACGCGCTCATCAGCGCCGGTGTCGACGTTCA
AGCTCTTCTGCAGAAGGTAGGAATTTCGGTTGATGGGAATGGAGAGAAAGTTGGAACGTTTGCATTGGCATATGCAGCGCATAAAGCAACTTCTCCAATAAGGTTCCCTC
CAACAGTGGCCCTTACTTCAGTGGTTGCAACTTGGATTGGGAAGAAAGTAGAGGAAGAGAATTAGCATAACTCTCTGTATTAGTCATTTGTTAGAGGTTTATCTAAGATA
TTATTTTATTTGATAGTGTATATTCAGCTAAATCCCATATAGATTGCATACTAAATCCCATATAGATGGGCGTTTTATTTGGAAGTTAATAAAATGGTTAAAAGAGTTTC
AATTTCTT
Protein sequenceShow/hide protein sequence
MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSKGDQAKELLAK
YGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN