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Carg18418 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18418
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPeptidyl-prolyl cis-trans isomerase G
Genome locationCarg_Chr20:758081..762132
RNA-Seq ExpressionCarg18418
SyntenyCarg18418
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0016853 - isomerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010338.1 hypothetical protein SDJN02_27131, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-47100Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELERL
        MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELERL
Subjt:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELERL

Query:  HVGISDSSSN
        HVGISDSSSN
Subjt:  HVGISDSSSN

XP_016900731.1 PREDICTED: NAC domain-containing protein 40 [Cucumis melo]3.9e-4095.15Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQK-QQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELER
        MSRSMLLVFLFVILIITSQFEW+QQLVPEVDT VNSQK QQQISTREEAVKEKILLSQERNIQRLNEVVRSLR+QLQQCRGRNITNGTALL+GHILELER
Subjt:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQK-QQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELER

Query:  LHV
        LHV
Subjt:  LHV

XP_022944563.1 uncharacterized protein LOC111448980 [Cucurbita moschata]2.9e-43100Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELERL
        MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELERL
Subjt:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELERL

Query:  HV
        HV
Subjt:  HV

XP_023512164.1 uncharacterized protein LOC111776968 [Cucurbita pepo subsp. pepo]1.9e-4299.02Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELERL
        MSRSMLLVFLFVILIITSQFEWKQQLVPEV TRVNSQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELERL
Subjt:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELERL

Query:  HV
        HV
Subjt:  HV

XP_038902642.1 uncharacterized protein LOC120089290 [Benincasa hispida]8.7e-4094.23Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLS--GHILELE
        MSRSMLLVFLFVILIITSQFEW+QQLVPEVD  +NSQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLS  GHILELE
Subjt:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLS--GHILELE

Query:  RLHV
        RLHV
Subjt:  RLHV

TrEMBL top hitse value%identityAlignment
A0A0A0KEF2 Uncharacterized protein1.2e-3994.17Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQK-QQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELER
        MSRSMLLVFLFVILIITSQFEW+QQLVPEVD+ VNSQK QQQISTREEAVKEKILLSQERNIQRLNEVVRSLR+QLQQCRGRNITNGTALLS HILELER
Subjt:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQK-QQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELER

Query:  LHV
        LHV
Subjt:  LHV

A0A1S4DXM3 NAC domain-containing protein 401.9e-4095.15Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQK-QQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELER
        MSRSMLLVFLFVILIITSQFEW+QQLVPEVDT VNSQK QQQISTREEAVKEKILLSQERNIQRLNEVVRSLR+QLQQCRGRNITNGTALL+GHILELER
Subjt:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQK-QQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELER

Query:  LHV
        LHV
Subjt:  LHV

A0A5A7V382 NAC domain-containing protein 401.9e-4095.15Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQK-QQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELER
        MSRSMLLVFLFVILIITSQFEW+QQLVPEVDT VNSQK QQQISTREEAVKEKILLSQERNIQRLNEVVRSLR+QLQQCRGRNITNGTALL+GHILELER
Subjt:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQK-QQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELER

Query:  LHV
        LHV
Subjt:  LHV

A0A6J1FY60 uncharacterized protein LOC1114489801.4e-43100Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELERL
        MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELERL
Subjt:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELERL

Query:  HV
        HV
Subjt:  HV

A0A6J1J9H8 uncharacterized protein LOC1114838101.4e-43100Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELERL
        MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELERL
Subjt:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELERL

Query:  HV
        HV
Subjt:  HV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G44280.1 unknown protein1.1e-2162.62Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRV-NSQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHI----L
        MS+ +LLV L VILI+TSQFEW+Q LV E+DT   +SQKQQQIS REEAVKEKI++SQER+IQRLNE+VRSL+ QL QC+G N T   A  S HI    +
Subjt:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRV-NSQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHI----L

Query:  ELERLHV
        E+ER  +
Subjt:  ELERLHV

AT5G06265.1 hyaluronan mediated motility receptor-related3.1e-1142.55Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTR-----VNSQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTAL
        M+RS +L+F+ + +++TSQFEW +Q+  E +T      ++ ++QQ I   +E+V+ K +L QE+ IQ+LNE+VR LR QL QCR  N    T L
Subjt:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTR-----VNSQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTAL

AT5G06265.2 hyaluronan mediated motility receptor-related3.1e-1142.55Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTR-----VNSQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTAL
        M+RS +L+F+ + +++TSQFEW +Q+  E +T      ++ ++QQ I   +E+V+ K +L QE+ IQ+LNE+VR LR QL QCR  N    T L
Subjt:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTR-----VNSQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTAL

AT5G22280.1 unknown protein5.1e-2259.43Show/hide
Query:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVN-SQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNG---TALLSGHILE
        MSR ++LVFL VILI+TSQFEW+Q L+ E+D   + SQK QQI+ REEAVKEKI+LSQER+IQRLN++VRSL+ QLQ+C+G N T     T+  +   +E
Subjt:  MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVN-SQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNG---TALLSGHILE

Query:  LERLHV
        LER H+
Subjt:  LERLHV

AT5G22280.2 unknown protein9.4e-1653.12Show/hide
Query:  FVILIITSQFEWKQQLVPEVDTRVN-SQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNG---TALLSGHILELERLHV
        F   +I   FEW+Q L+ E+D   + SQK QQI+ REEAVKEKI+LSQER+IQRLN++VRSL+ QLQ+C+G N T     T+  +   +ELER H+
Subjt:  FVILIITSQFEWKQQLVPEVDTRVN-SQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNG---TALLSGHILELERLHV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAGATCCATGTTACTTGTGTTTCTGTTCGTTATTCTCATTATCACTTCTCAATTCGAGTGGAAGCAACAACTAGTACCTGAGGTTGATACCAGGGTAAACTCCCA
GAAGCAGCAACAGATATCAACGAGGGAAGAAGCAGTTAAGGAGAAGATATTGTTGTCACAAGAAAGGAATATCCAGAGGCTCAATGAAGTTGTGCGAAGCCTCCGGGAAC
AGTTGCAGCAGTGCAGAGGCAGGAACATTACGAATGGGACAGCCCTTCTGAGTGGACATATTCTTGAGCTCGAACGACTTCATGTCGGAATATCTGATAGTTCAAGTAAT
TAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCAGATCCATGTTACTTGTGTTTCTGTTCGTTATTCTCATTATCACTTCTCAATTCGAGTGGAAGCAACAACTAGTACCTGAGGTTGATACCAGGGTAAACTCCCA
GAAGCAGCAACAGATATCAACGAGGGAAGAAGCAGTTAAGGAGAAGATATTGTTGTCACAAGAAAGGAATATCCAGAGGCTCAATGAAGTTGTGCGAAGCCTCCGGGAAC
AGTTGCAGCAGTGCAGAGGCAGGAACATTACGAATGGGACAGCCCTTCTGAGTGGACATATTCTTGAGCTCGAACGACTTCATGTCGGAATATCTGATAGTTCAAGTAAT
TAG
Protein sequenceShow/hide protein sequence
MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQKQQQISTREEAVKEKILLSQERNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELERLHVGISDSSSN